CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32584109|32584353
Strand -
CircType exon
Host Gene ENSG00000196126.9;
Algorism CIRI2;
Sequence CTCGCCGCTGCACTGTGAAGCTCTCCACAACCCCGTAGTTGTGTCTGCAGTAGGTGTCCACCGCGGCCCGCGCCTGCTCCAGGATGTCCTTCTGGCTGTTCCAGTACTCAGCGTCAGGCCGCCCCAGCTCCGTCACCGCCCGGAACTCCCCCACGTCGCTGTCGAAGCGCACGGACTCCTCCTGGTTATAGAAGTATCTGTCCAGGAACCGCACCCGCTCCGTCCCATTGAAGAAATGACACTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32584109|32584353 hsa-miR-27a-5p 0 0 1
chr6:32584109|32584353 hsa-miR-27a-3p 0 0 1
chr6:32584109|32584353 hsa-miR-148a-5p 0 0 1
chr6:32584109|32584353 hsa-miR-148a-3p 0 0 1
chr6:32584109|32584353 hsa-miR-217-5p 0 0 1
chr6:32584109|32584353 hsa-miR-217-3p 0 0 1
chr6:32584109|32584353 hsa-miR-27b-5p 0 0 1
chr6:32584109|32584353 hsa-miR-27b-3p 0 0 1
chr6:32584109|32584353 hsa-miR-122-5p 0 0 1
chr6:32584109|32584353 hsa-miR-122-3p 0 0 1
chr6:32584109|32584353 hsa-miR-152-5p 0 0 1
chr6:32584109|32584353 hsa-miR-152-3p 0 0 1
chr6:32584109|32584353 hsa-miR-184 0 0 1
chr6:32584109|32584353 hsa-miR-185-5p 0 0 1
chr6:32584109|32584353 hsa-miR-185-3p 0 0 1
chr6:32584109|32584353 hsa-miR-148b-5p 0 0 1
chr6:32584109|32584353 hsa-miR-148b-3p 0 0 1
chr6:32584109|32584353 hsa-miR-616-5p 0 0 1
chr6:32584109|32584353 hsa-miR-616-3p 0 0 1
chr6:32584109|32584353 hsa-miR-625-5p 0 0 1
chr6:32584109|32584353 hsa-miR-625-3p 0 0 1
chr6:32584109|32584353 hsa-miR-765 0 0 1
chr6:32584109|32584353 hsa-miR-675-5p 0 0 1
chr6:32584109|32584353 hsa-miR-675-3p 0 0 1
chr6:32584109|32584353 hsa-miR-665 0 0 1
chr6:32584109|32584353 hsa-miR-1234-3p 0 0 1
chr6:32584109|32584353 hsa-miR-1243 0 0 1
chr6:32584109|32584353 hsa-miR-1275 0 0 1
chr6:32584109|32584353 hsa-miR-1278 0 0 1
chr6:32584109|32584353 hsa-miR-1234 0 0 1
chr6:32584109|32584353 hsa-miR-1289 0 0 1
chr6:32584109|32584353 hsa-miR-513a-5p 0 0 1
chr6:32584109|32584353 hsa-miR-509-3-5p 0 1 1
chr6:32584109|32584353 hsa-miR-509-5p 0 1 1
chr6:32584109|32584353 hsa-miR-128 0 0 1
chr6:32584109|32584353 hsa-miR-886-3p 0 0 1
chr6:32584109|32584353 hsa-miR-575 1 0 0
chr6:32584109|32584353 hsa-miR-608 1 0 0
chr6:32584109|32584353 hsa-miR-612 0 1 0
chr6:32584109|32584353 hsa-miR-762 1 0 0
chr6:32584109|32584353 hsa-miR-1469 1 0 0
chr6:32584109|32584353 hsa-miR-3153 1 0 0
chr6:32584109|32584353 hsa-miR-3154 0 1 0
chr6:32584109|32584353 hsa-miR-3166 0 1 0
chr6:32584109|32584353 hsa-miR-3175 1 0 0
chr6:32584109|32584353 hsa-miR-3196 1 0 0
chr6:32584109|32584353 hsa-miR-4298 1 0 0
chr6:32584109|32584353 hsa-miR-4322 1 0 0
chr6:32584109|32584353 hsa-miR-4281 1 0 0
chr6:32584109|32584353 hsa-miR-3621 1 0 0
chr6:32584109|32584353 hsa-miR-3665 1 1 0
chr6:32584109|32584353 hsa-miR-3911 1 0 0
chr6:32584109|32584353 hsa-miR-1268b 1 0 0
chr6:32584109|32584353 hsa-miR-4418 0 1 0
chr6:32584109|32584353 hsa-miR-4449 1 0 0
chr6:32584109|32584353 hsa-miR-4466 1 1 0
chr6:32584109|32584353 hsa-miR-4479 1 0 0
chr6:32584109|32584353 hsa-miR-4488 1 0 0
chr6:32584109|32584353 hsa-miR-4492 1 0 0
chr6:32584109|32584353 hsa-miR-4498 1 0 0
chr6:32584109|32584353 hsa-miR-4505 1 0 0
chr6:32584109|32584353 hsa-miR-4507 1 0 0
chr6:32584109|32584353 hsa-miR-4508 1 0 0
chr6:32584109|32584353 hsa-miR-4525 1 0 0
chr6:32584109|32584353 hsa-miR-1587 1 0 0
chr6:32584109|32584353 hsa-miR-3960 1 0 0
chr6:32584109|32584353 hsa-miR-4651 1 0 0
chr6:32584109|32584353 hsa-miR-4721 1 0 0
chr6:32584109|32584353 hsa-miR-4734 1 0 0
chr6:32584109|32584353 hsa-miR-4767 1 0 0
chr6:32584109|32584353 hsa-miR-5698 1 1 0
chr6:32584109|32584353 hsa-miR-5705 1 0 0
chr6:32584109|32584353 hsa-miR-5787 1 0 0
chr6:32584109|32584353 hsa-miR-6081 1 1 0
chr6:32584109|32584353 hsa-miR-6085 1 0 0
chr6:32584109|32584353 hsa-miR-6090 1 0 0
chr6:32584109|32584353 hsa-miR-6127 1 0 0
chr6:32584109|32584353 hsa-miR-8080 0 1 0
chr6:32584109|32584353 hsa-miR-8082 1 0 0
chr6:32584109|32584353 hsa-miR-8089 1 0 0
chr6:32584109|32584353 hsa-miR-128-3p 0 1 0
chr6:32584109|32584353 hsa-miR-4731-5p 1 1 0
chr6:32584109|32584353 hsa-miR-1273h-3p 0 1 0
chr6:32584109|32584353 hsa-miR-6765-5p 1 0 0
chr6:32584109|32584353 hsa-miR-215-3p 0 1 0
chr6:32584109|32584353 hsa-miR-6728-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6880-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4653-3p 1 0 0
chr6:32584109|32584353 hsa-miR-6741-5p 1 0 0
chr6:32584109|32584353 hsa-miR-23b-5p 1 0 0
chr6:32584109|32584353 hsa-miR-7845-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6742-5p 1 0 0
chr6:32584109|32584353 hsa-miR-3180-3p 1 1 0
chr6:32584109|32584353 hsa-miR-6793-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6796-5p 1 0 0
chr6:32584109|32584353 hsa-miR-23a-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6798-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6782-5p 1 0 0
chr6:32584109|32584353 hsa-miR-615-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4690-5p 0 1 0
chr6:32584109|32584353 hsa-miR-92b-5p 1 1 0
chr6:32584109|32584353 hsa-miR-6749-5p 1 0 0
chr6:32584109|32584353 hsa-miR-3648 1 1 0
chr6:32584109|32584353 hsa-miR-4787-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4638-3p 0 1 0
chr6:32584109|32584353 hsa-miR-6824-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6789-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6877-5p 1 0 0
chr6:32584109|32584353 hsa-miR-5010-5p 1 0 0
chr6:32584109|32584353 hsa-miR-490-3p 0 1 0
chr6:32584109|32584353 hsa-miR-6869-5p 1 0 0
chr6:32584109|32584353 hsa-miR-1250-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4750-5p 1 0 0
chr6:32584109|32584353 hsa-miR-2277-5p 0 1 0
chr6:32584109|32584353 hsa-miR-10400-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4763-3p 1 0 0
chr6:32584109|32584353 hsa-miR-6812-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6816-5p 1 1 0
chr6:32584109|32584353 hsa-miR-6870-5p 1 1 0
chr6:32584109|32584353 hsa-miR-1343-5p 1 0 0
chr6:32584109|32584353 hsa-miR-3180 1 1 0
chr6:32584109|32584353 hsa-miR-5001-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6726-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6737-5p 1 1 0
chr6:32584109|32584353 hsa-miR-6743-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6752-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6756-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6803-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6813-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6819-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6842-5p 1 0 0
chr6:32584109|32584353 hsa-miR-7107-5p 0 1 0
chr6:32584109|32584353 hsa-miR-7110-5p 1 0 0
chr6:32584109|32584353 hsa-miR-10401-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6751-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6763-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6779-5p 1 0 0
chr6:32584109|32584353 hsa-miR-7111-5p 1 0 0
chr6:32584109|32584353 hsa-miR-3620-5p 1 0 0
chr6:32584109|32584353 hsa-miR-10392-5p 1 1 0
chr6:32584109|32584353 hsa-miR-1237-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4726-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4745-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6777-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6848-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6883-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6889-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4723-5p 1 1 0
chr6:32584109|32584353 hsa-miR-939-5p 1 0 0
chr6:32584109|32584353 hsa-miR-4758-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6511b-5p 0 1 0
chr6:32584109|32584353 hsa-miR-4665-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6855-5p 1 0 0
chr6:32584109|32584353 hsa-miR-6791-5p 1 0 0
chr6:32584109|32584353 hsa-miR-3619-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:32584109|32584353
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence MHCEALHNPVVVSAVGVHRGPRLLQDVLLAVPVLSVRPPQLRHRPELPHVAVEAHGLLLVIEVSVQEPHPLRPIEEMTL
Nucleotide Sequence CTGCACTGTGAAGCTCTCCACAACCCCGTAGTTGTGTCTGCAGTAGGTGTCCACCGCGGCCCGCGCCTGCTCCAGGATGTCCTTCTGGCTGTTCCAGTACTCAGCGTCAGGCCGCCCCAGCTCCGTCACCGCCCGGAACTCCCCCACGTCGCTGTCGAAGCGCACGGACTCCTCCTGGTTATAGAAGTATCTGTCCAGGAACCGCACCCGCTCCGTCCCATTGAAGAAATGACACTC
CircID chr6:32584109|32584353
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MSFWLFQYSASGRPSSVTARNSPTSLSKRTDSSWL
Nucleotide Sequence ATGTCCTTCTGGCTGTTCCAGTACTCAGCGTCAGGCCGCCCCAGCTCCGTCACCGCCCGGAACTCCCCCACGTCGCTGTCGAAGCGCACGGACTCCTCCTGGTTATAG
CircID chr6:32584109|32584353
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MEQPEGHPGAGAGRGGHLLQTQLRGCGELHSAAA
Nucleotide Sequence CTGGAACAGCCAGAAGGACATCCTGGAGCAGGCGCGGGCCGCGGTGGACACCTACTGCAGACACAACTACGGGGTTGTGGAGAGCTTCACAGTGCAGCGGCG
CircID chr6:32584109|32584353
ORF Type ORF4
Protein Length 68
Nucleotide Length 204
Protein Sequence MDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARAAVDTYCRHNYGVVESFTVQRR
Nucleotide Sequence CTGGACAGATACTTCTATAACCAGGAGGAGTCCGTGCGCTTCGACAGCGACGTGGGGGAGTTCCGGGCGGTGACGGAGCTGGGGCGGCCTGACGCTGAGTACTGGAACAGCCAGAAGGACATCCTGGAGCAGGCGCGGGCCGCGGTGGACACCTACTGCAGACACAACTACGGGGTTGTGGAGAGCTTCACAGTGCAGCGGCGA
CircID chr6:32584109|32584353
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MGRSGCGSWTDTSITRRSPCASTATWGSSGR
Nucleotide Sequence ATGGGACGGAGCGGGTGCGGTTCCTGGACAGATACTTCTATAACCAGGAGGAGTCCGTGCGCTTCGACAGCGACGTGGGGGAGTTCCGGGCGGTGA
CircID chr6:32584109|32584353
ORF Type ORF6
Protein Length 39
Nucleotide Length 117
Protein Sequence MTLSTGTARRTSWSRRGPRWTPTADTTTGLWRASQCSGE
Nucleotide Sequence CTGACGCTGAGTACTGGAACAGCCAGAAGGACATCCTGGAGCAGGCGCGGGCCGCGGTGGACACCTACTGCAGACACAACTACGGGGTTGTGGAGAGCTTCACAGTGCAGCGGCGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab