CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32852109|32852439
Strand -
CircType exon
Host Gene ENSG00000168394.10;
Algorism CIRI2;
Sequence CTGTCTGGTTCTGTTGGAAAAACTCCGTCTCCTGGCGCAGGACAGCCCCAAACACCTCTCCCTGCAAGTGGCTGTGCACGTGGCCCATGGTGTTGTTATAGATCCCGTCACCCACGAACTCCAGCACTGCACTATAAAGAACCCGGAAAAAAAGGGGATCAGGGTGTGTTCAGGGAACAGACTGAAGGTCCCAGGTATCCCCATATAAGTGCATTTCGGACAGCAGCCCCAACTTCCAACTCCCTCATTTGCAGGGTGCCCCATTTTCAGCCCCCAGACCTGGCTATGGTGAGAATGGACATGAGAGTTAAGTTTCGAGTGAAGGTATCGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32852109|32852439 hsa-miR-130a-5p 0 0 1
chr6:32852109|32852439 hsa-miR-130a-3p 0 0 1
chr6:32852109|32852439 hsa-miR-301a-5p 0 0 1
chr6:32852109|32852439 hsa-miR-301a-3p 0 0 1
chr6:32852109|32852439 hsa-miR-130b-5p 0 0 1
chr6:32852109|32852439 hsa-miR-130b-3p 0 0 1
chr6:32852109|32852439 hsa-miR-571 0 0 1
chr6:32852109|32852439 hsa-miR-575 0 0 1
chr6:32852109|32852439 hsa-miR-618 0 0 1
chr6:32852109|32852439 hsa-miR-619-5p 0 0 1
chr6:32852109|32852439 hsa-miR-619-3p 0 0 1
chr6:32852109|32852439 hsa-miR-622 0 0 1
chr6:32852109|32852439 hsa-miR-626 0 0 1
chr6:32852109|32852439 hsa-miR-637 1 1 1
chr6:32852109|32852439 hsa-miR-454-5p 0 0 1
chr6:32852109|32852439 hsa-miR-454-3p 0 0 1
chr6:32852109|32852439 hsa-miR-665 0 1 1
chr6:32852109|32852439 hsa-miR-301b-5p 0 0 1
chr6:32852109|32852439 hsa-miR-301b-3p 0 0 1
chr6:32852109|32852439 hsa-miR-1180-5p 0 0 1
chr6:32852109|32852439 hsa-miR-1180-3p 0 0 1
chr6:32852109|32852439 hsa-miR-1229-5p 0 0 1
chr6:32852109|32852439 hsa-miR-1229-3p 0 0 1
chr6:32852109|32852439 hsa-miR-1287-5p 0 0 1
chr6:32852109|32852439 hsa-miR-1287-3p 0 0 1
chr6:32852109|32852439 hsa-miR-1262 0 0 1
chr6:32852109|32852439 hsa-miR-1324 0 0 1
chr6:32852109|32852439 hsa-miR-512-3p 0 0 1
chr6:32852109|32852439 hsa-miR-486-3p 0 0 1
chr6:32852109|32852439 hsa-miR-125a-5p 0 0 1
chr6:32852109|32852439 hsa-miR-362-3p 0 0 1
chr6:32852109|32852439 hsa-miR-1274a 0 0 1
chr6:32852109|32852439 hsa-miR-125b 0 0 1
chr6:32852109|32852439 hsa-miR-329 0 0 1
chr6:32852109|32852439 hsa-miR-1259 0 0 1
chr6:32852109|32852439 hsa-miR-608 1 0 0
chr6:32852109|32852439 hsa-miR-623 1 0 0
chr6:32852109|32852439 hsa-miR-638 1 0 0
chr6:32852109|32852439 hsa-miR-762 1 0 0
chr6:32852109|32852439 hsa-miR-4259 0 1 0
chr6:32852109|32852439 hsa-miR-4260 0 1 0
chr6:32852109|32852439 hsa-miR-4270 1 0 0
chr6:32852109|32852439 hsa-miR-4447 1 0 0
chr6:32852109|32852439 hsa-miR-3135b 0 1 0
chr6:32852109|32852439 hsa-miR-4489 1 0 0
chr6:32852109|32852439 hsa-miR-4508 1 0 0
chr6:32852109|32852439 hsa-miR-4510 1 1 0
chr6:32852109|32852439 hsa-miR-4656 1 1 0
chr6:32852109|32852439 hsa-miR-4675 0 1 0
chr6:32852109|32852439 hsa-miR-4706 1 0 0
chr6:32852109|32852439 hsa-miR-4739 1 0 0
chr6:32852109|32852439 hsa-miR-4741 1 1 0
chr6:32852109|32852439 hsa-miR-5194 1 0 0
chr6:32852109|32852439 hsa-miR-5787 1 0 0
chr6:32852109|32852439 hsa-miR-6085 1 0 0
chr6:32852109|32852439 hsa-miR-6127 1 1 0
chr6:32852109|32852439 hsa-miR-6129 1 1 0
chr6:32852109|32852439 hsa-miR-6130 0 1 0
chr6:32852109|32852439 hsa-miR-6133 1 1 0
chr6:32852109|32852439 hsa-miR-7150 1 0 0
chr6:32852109|32852439 hsa-miR-8089 1 0 0
chr6:32852109|32852439 hsa-miR-11399 1 1 0
chr6:32852109|32852439 hsa-miR-143-5p 1 1 0
chr6:32852109|32852439 hsa-miR-6825-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6799-5p 1 1 0
chr6:32852109|32852439 hsa-miR-3692-5p 1 0 0
chr6:32852109|32852439 hsa-miR-7851-3p 0 1 0
chr6:32852109|32852439 hsa-miR-4722-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6730-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6762-3p 1 0 0
chr6:32852109|32852439 hsa-miR-6871-5p 1 0 0
chr6:32852109|32852439 hsa-miR-1292-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6793-5p 1 0 0
chr6:32852109|32852439 hsa-miR-185-3p 1 1 0
chr6:32852109|32852439 hsa-miR-6829-5p 1 1 0
chr6:32852109|32852439 hsa-miR-23a-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6760-5p 0 1 0
chr6:32852109|32852439 hsa-miR-3944-3p 1 0 0
chr6:32852109|32852439 hsa-miR-4640-5p 1 0 0
chr6:32852109|32852439 hsa-miR-4691-3p 0 1 0
chr6:32852109|32852439 hsa-miR-767-5p 0 1 0
chr6:32852109|32852439 hsa-miR-92b-5p 1 0 0
chr6:32852109|32852439 hsa-miR-3677-3p 1 0 0
chr6:32852109|32852439 hsa-miR-6749-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6834-5p 0 1 0
chr6:32852109|32852439 hsa-miR-149-3p 1 0 0
chr6:32852109|32852439 hsa-miR-3162-5p 1 1 0
chr6:32852109|32852439 hsa-miR-6500-3p 1 1 0
chr6:32852109|32852439 hsa-miR-3191-3p 1 0 0
chr6:32852109|32852439 hsa-miR-6837-3p 0 1 0
chr6:32852109|32852439 hsa-miR-3620-3p 0 1 0
chr6:32852109|32852439 hsa-miR-670-5p 0 1 0
chr6:32852109|32852439 hsa-miR-3675-5p 1 1 0
chr6:32852109|32852439 hsa-miR-1207-5p 1 0 0
chr6:32852109|32852439 hsa-miR-1273h-5p 1 0 0
chr6:32852109|32852439 hsa-miR-4763-3p 1 0 0
chr6:32852109|32852439 hsa-miR-6870-5p 1 1 0
chr6:32852109|32852439 hsa-miR-5001-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6726-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6737-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6752-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6754-5p 1 1 0
chr6:32852109|32852439 hsa-miR-6756-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6803-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6813-5p 1 0 0
chr6:32852109|32852439 hsa-miR-10401-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6722-3p 1 0 0
chr6:32852109|32852439 hsa-miR-6751-5p 1 1 0
chr6:32852109|32852439 hsa-miR-6763-5p 1 0 0
chr6:32852109|32852439 hsa-miR-4701-3p 0 1 0
chr6:32852109|32852439 hsa-miR-4749-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6846-5p 1 1 0
chr6:32852109|32852439 hsa-miR-6848-5p 1 1 0
chr6:32852109|32852439 hsa-miR-6889-5p 1 0 0
chr6:32852109|32852439 hsa-miR-939-5p 1 0 0
chr6:32852109|32852439 hsa-miR-4758-5p 1 0 0
chr6:32852109|32852439 hsa-miR-6511b-5p 1 0 0
chr6:32852109|32852439 hsa-miR-1914-3p 1 0 0
chr6:32852109|32852439 hsa-miR-6736-5p 0 1 0
chr6:32852109|32852439 hsa-miR-6855-5p 1 1 0
chr6:32852109|32852439 hsa-miR-329-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:32852109|32852439
ORF Type ORF1
Protein Length 110
Nucleotide Length 330
Protein Sequence LSGSVGKTPSPGAGQPQTPLPASGCARGPWCCYRSRHPRTPALHYKEPGKKGDQGVFREQTEGPRYPHISAFRTAAPTSNSLICRVPHFQPPDLAMVRMDMRVKFRVKVS
Nucleotide Sequence CTGTCTGGTTCTGTTGGAAAAACTCCGTCTCCTGGCGCAGGACAGCCCCAAACACCTCTCCCTGCAAGTGGCTGTGCACGTGGCCCATGGTGTTGTTATAGATCCCGTCACCCACGAACTCCAGCACTGCACTATAAAGAACCCGGAAAAAAAGGGGATCAGGGTGTGTTCAGGGAACAGACTGAAGGTCCCAGGTATCCCCATATAAGTGCATTTCGGACAGCAGCCCCAACTTCCAACTCCCTCATTTGCAGGGTGCCCCATTTTCAGCCCCCAGACCTGGCTATGGTGAGAATGGACATGAGAGTTAAGTTTCGAGTGAAGGTATCG
CircID chr6:32852109|32852439
ORF Type ORF2
Protein Length 67
Nucleotide Length 204
Protein Sequence MVLLEKLRLLAQDSPKHLSLQVAVHVAHGVVIDPVTHELQHCTIKNPEKKGIRVCSGNRLKVPGIPI
Nucleotide Sequence CTGGTTCTGTTGGAAAAACTCCGTCTCCTGGCGCAGGACAGCCCCAAACACCTCTCCCTGCAAGTGGCTGTGCACGTGGCCCATGGTGTTGTTATAGATCCCGTCACCCACGAACTCCAGCACTGCACTATAAAGAACCCGGAAAAAAAGGGGATCAGGGTGTGTTCAGGGAACAGACTGAAGGTCCCAGGTATCCCCATATAA
CircID chr6:32852109|32852439
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MEFVGDGIYNNTMGHVHSHLQGEVFGAVLRQETEFFQQNQT
Nucleotide Sequence CTGGAGTTCGTGGGTGACGGGATCTATAACAACACCATGGGCCACGTGCACAGCCACTTGCAGGGAGAGGTGTTTGGGGCTGTCCTGCGCCAGGAGACGGAGTTTTTCCAACAGAACCAGACA
CircID chr6:32852109|32852439
ORF Type ORF4
Protein Length 90
Nucleotide Length 270
Protein Sequence MKMGHPANEGVGSWGCCPKCTYMGIPGTFSLFPEHTLIPFFSGFFIVQCWSSWVTGSITTPWATCTATCRERCLGLSCARRRSFSNRTRQ
Nucleotide Sequence CTGAAAATGGGGCACCCTGCAAATGAGGGAGTTGGAAGTTGGGGCTGCTGTCCGAAATGCACTTATATGGGGATACCTGGGACCTTCAGTCTGTTCCCTGAACACACCCTGATCCCCTTTTTTTCCGGGTTCTTTATAGTGCAGTGCTGGAGTTCGTGGGTGACGGGATCTATAACAACACCATGGGCCACGTGCACAGCCACTTGCAGGGAGAGGTGTTTGGGGCTGTCCTGCGCCAGGAGACGGAGTTTTTCCAACAGAACCAGACAG
CircID chr6:32852109|32852439
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MQMRELEVGAAVRNALIWGYLGPSVCSLNTP
Nucleotide Sequence CTGCAAATGAGGGAGTTGGAAGTTGGGGCTGCTGTCCGAAATGCACTTATATGGGGATACCTGGGACCTTCAGTCTGTTCCCTGAACACACCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab