CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32948724|32949627
Strand +
CircType exon
Host Gene ENSG00000204257.13;
Algorism CIRI2;
Sequence AGCAATTGCCTATTGGGTACCCCGGAACGCACTGCCCTCAGATCTGCTGGAGAATGTGCTGTGTGGCGTGGCCTTTGGCCTGGGTGTGCTGGGCATCATCGTGGGCATTGTTCTCATCATCTACTTCCGGAAGCCTTGCTCAGGTGACTGATTCTTCCAGACCAGAGTTTGATGCCAGCAGCTTCGGCCATCCAAACAGAGGATGCTCAGATTTCTCACATCCTGCCCAGGATCTCCTCTTAGGGTAGAAGTCTCTGGGACATCCCTGGGGTGTGTGTGTAGATTTCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32948724|32949627 hsa-miR-34a-5p 0 0 1
chr6:32948724|32949627 hsa-miR-34a-3p 0 0 1
chr6:32948724|32949627 hsa-miR-146a-5p 0 0 1
chr6:32948724|32949627 hsa-miR-146a-3p 0 0 1
chr6:32948724|32949627 hsa-miR-449a 0 0 1
chr6:32948724|32949627 hsa-miR-539-5p 0 0 1
chr6:32948724|32949627 hsa-miR-539-3p 0 0 1
chr6:32948724|32949627 hsa-miR-589-5p 0 0 1
chr6:32948724|32949627 hsa-miR-589-3p 0 0 1
chr6:32948724|32949627 hsa-miR-603 0 0 1
chr6:32948724|32949627 hsa-miR-612 1 1 1
chr6:32948724|32949627 hsa-miR-449b-5p 0 0 1
chr6:32948724|32949627 hsa-miR-449b-3p 0 0 1
chr6:32948724|32949627 hsa-miR-766-5p 0 0 1
chr6:32948724|32949627 hsa-miR-766-3p 0 0 1
chr6:32948724|32949627 hsa-miR-922 0 0 1
chr6:32948724|32949627 hsa-miR-1299 0 0 1
chr6:32948724|32949627 hsa-miR-1265 0 1 1
chr6:32948724|32949627 hsa-miR-1272 0 1 1
chr6:32948724|32949627 hsa-miR-302f 0 0 1
chr6:32948724|32949627 hsa-miR-1322 0 0 1
chr6:32948724|32949627 hsa-miR-875-3p 0 0 1
chr6:32948724|32949627 hsa-miR-338-3p 0 0 1
chr6:32948724|32949627 hsa-miR-34c-5p 0 0 1
chr6:32948724|32949627 hsa-miR-146b-5p 0 0 1
chr6:32948724|32949627 hsa-miR-515-5p 0 0 1
chr6:32948724|32949627 hsa-miR-362-3p 0 0 1
chr6:32948724|32949627 hsa-miR-7 0 0 1
chr6:32948724|32949627 hsa-miR-1285 0 0 1
chr6:32948724|32949627 hsa-miR-329 0 0 1
chr6:32948724|32949627 hsa-miR-365 0 0 1
chr6:32948724|32949627 hsa-miR-662 1 0 0
chr6:32948724|32949627 hsa-miR-1179 0 1 0
chr6:32948724|32949627 hsa-miR-3941 0 1 0
chr6:32948724|32949627 hsa-miR-4449 1 0 0
chr6:32948724|32949627 hsa-miR-4642 0 1 0
chr6:32948724|32949627 hsa-miR-4669 1 0 0
chr6:32948724|32949627 hsa-miR-4784 0 1 0
chr6:32948724|32949627 hsa-miR-5705 1 0 0
chr6:32948724|32949627 hsa-miR-6860 1 1 0
chr6:32948724|32949627 hsa-miR-8485 0 1 0
chr6:32948724|32949627 hsa-miR-9903 1 0 0
chr6:32948724|32949627 hsa-miR-12119 0 1 0
chr6:32948724|32949627 hsa-miR-500b-3p 0 1 0
chr6:32948724|32949627 hsa-miR-3150b-3p 0 1 0
chr6:32948724|32949627 hsa-miR-6888-5p 0 1 0
chr6:32948724|32949627 hsa-miR-1226-5p 0 1 0
chr6:32948724|32949627 hsa-miR-1229-5p 1 1 0
chr6:32948724|32949627 hsa-miR-3691-5p 1 0 0
chr6:32948724|32949627 hsa-miR-6824-5p 1 0 0
chr6:32948724|32949627 hsa-miR-6895-5p 0 1 0
chr6:32948724|32949627 hsa-miR-3922-5p 1 0 0
chr6:32948724|32949627 hsa-miR-6768-3p 0 1 0
chr6:32948724|32949627 hsa-miR-4717-5p 0 1 0
chr6:32948724|32949627 hsa-miR-6774-5p 1 0 0
chr6:32948724|32949627 hsa-miR-6879-5p 1 1 0
chr6:32948724|32949627 hsa-miR-5189-5p 0 1 0
chr6:32948724|32949627 hsa-miR-4632-5p 0 1 0
chr6:32948724|32949627 hsa-miR-6735-5p 0 1 0
chr6:32948724|32949627 hsa-miR-3187-5p 1 1 0
chr6:32948724|32949627 hsa-miR-6831-5p 0 1 0
chr6:32948724|32949627 hsa-miR-1285-3p 0 1 0
chr6:32948724|32949627 hsa-miR-4664-5p 1 1 0
chr6:32948724|32949627 hsa-miR-7843-5p 0 1 0
chr6:32948724|32949627 hsa-miR-6783-3p 1 0 0
chr6:32948724|32949627 hsa-miR-6764-5p 0 1 0
chr6:32948724|32949627 hsa-miR-3622b-3p 0 1 0
chr6:32948724|32949627 hsa-miR-6824-3p 0 1 0
chr6:32948724|32949627 hsa-miR-6764-3p 0 1 0
chr6:32948724|32949627 hsa-miR-6505-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:32948724|32949627
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MGTPERTALRSAGECAVWRGLWPGCAGHHRGHCSHHLLPEALLR
Nucleotide Sequence TTGGGTACCCCGGAACGCACTGCCCTCAGATCTGCTGGAGAATGTGCTGTGTGGCGTGGCCTTTGGCCTGGGTGTGCTGGGCATCATCGTGGGCATTGTTCTCATCATCTACTTCCGGAAGCCTTGCTCAGGTGA
CircID chr6:32948724|32949627
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MILPDQSLMPAASAIQTEDAQISHILPRISS
Nucleotide Sequence CTGATTCTTCCAGACCAGAGTTTGATGCCAGCAGCTTCGGCCATCCAAACAGAGGATGCTCAGATTTCTCACATCCTGCCCAGGATCTCCTCTTAG
CircID chr6:32948724|32949627
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MPSDLLENVLCGVAFGLGVLGIIVGIVLIIYFRKPCSGD
Nucleotide Sequence CTGCCCTCAGATCTGCTGGAGAATGTGCTGTGTGGCGTGGCCTTTGGCCTGGGTGTGCTGGGCATCATCGTGGGCATTGTTCTCATCATCTACTTCCGGAAGCCTTGCTCAGGTGACTGA
CircID chr6:32948724|32949627
ORF Type ORF4
Protein Length 29
Nucleotide Length 87
Protein Sequence MLRFLTSCPGSPLRVEVSGTSLGCVCRFP
Nucleotide Sequence ATGCTCAGATTTCTCACATCCTGCCCAGGATCTCCTCTTAGGGTAGAAGTCTCTGGGACATCCCTGGGGTGTGTGTGTAGATTTCCC
CircID chr6:32948724|32949627
ORF Type ORF5
Protein Length 80
Nucleotide Length 243
Protein Sequence MPIGYPGTHCPQICWRMCCVAWPLAWVCWASSWALFSSSTSGSLAQVTDSSRPEFDASSFGHPNRGCSDFSHPAQDLLLG
Nucleotide Sequence TTGCCTATTGGGTACCCCGGAACGCACTGCCCTCAGATCTGCTGGAGAATGTGCTGTGTGGCGTGGCCTTTGGCCTGGGTGTGCTGGGCATCATCGTGGGCATTGTTCTCATCATCTACTTCCGGAAGCCTTGCTCAGGTGACTGATTCTTCCAGACCAGAGTTTGATGCCAGCAGCTTCGGCCATCCAAACAGAGGATGCTCAGATTTCTCACATCCTGCCCAGGATCTCCTCTTAGGGTAG
CircID chr6:32948724|32949627
ORF Type ORF6
Protein Length 29
Nucleotide Length 90
Protein Sequence MSILCLDGRSCWHQTLVWKNQSPEQGFRK
Nucleotide Sequence CTGAGCATCCTCTGTTTGGATGGCCGAAGCTGCTGGCATCAAACTCTGGTCTGGAAGAATCAGTCACCTGAGCAAGGCTTCCGGAAGTAG
CircID chr6:32948724|32949627
ORF Type ORF7
Protein Length 36
Nucleotide Length 111
Protein Sequence MMRTMPTMMPSTPRPKATPHSTFSSRSEGSAFRGTQ
Nucleotide Sequence ATGATGAGAACAATGCCCACGATGATGCCCAGCACACCCAGGCCAAAGGCCACGCCACACAGCACATTCTCCAGCAGATCTGAGGGCAGTGCGTTCCGGGGTACCCAATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab