CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32974518|32974666
Strand -
CircType exon
Host Gene ENSG00000204256.11;
Algorism CIRI2;
Sequence CAGGGAAGAGGATTCGAAAACCCTCTCTCTTGTATGAGGGCTTTGAGAGCCCCACAATGGCTTCGGTGCCTGCTTTGCAACTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAGTTACCAACCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32974518|32974666 hsa-miR-381-5p 0 0 1
chr6:32974518|32974666 hsa-miR-381-3p 0 0 1
chr6:32974518|32974666 hsa-miR-382-5p 0 0 1
chr6:32974518|32974666 hsa-miR-382-3p 0 0 1
chr6:32974518|32974666 hsa-miR-527 0 0 1
chr6:32974518|32974666 hsa-miR-555 0 0 1
chr6:32974518|32974666 hsa-miR-608 1 0 1
chr6:32974518|32974666 hsa-miR-300 0 0 1
chr6:32974518|32974666 hsa-miR-541-5p 0 0 1
chr6:32974518|32974666 hsa-miR-541-3p 0 0 1
chr6:32974518|32974666 hsa-miR-1236-5p 0 0 1
chr6:32974518|32974666 hsa-miR-1236-3p 0 0 1
chr6:32974518|32974666 hsa-miR-1293 0 0 1
chr6:32974518|32974666 hsa-miR-491-5p 0 0 1
chr6:32974518|32974666 hsa-miR-654-5p 0 0 1
chr6:32974518|32974666 hsa-miR-330-3p 0 0 1
chr6:32974518|32974666 hsa-miR-1207-5p 1 0 1
chr6:32974518|32974666 hsa-miR-769-3p 1 0 1
chr6:32974518|32974666 hsa-miR-485-3p 0 0 1
chr6:32974518|32974666 hsa-miR-450b-3p 0 0 1
chr6:32974518|32974666 hsa-miR-518a-5p 0 0 1
chr6:32974518|32974666 hsa-miR-371-5p 0 0 1
chr6:32974518|32974666 hsa-miR-1274a 0 0 1
chr6:32974518|32974666 hsa-miR-663a 1 0 0
chr6:32974518|32974666 hsa-miR-1268a 1 0 0
chr6:32974518|32974666 hsa-miR-1268b 1 0 0
chr6:32974518|32974666 hsa-miR-4467 1 0 0
chr6:32974518|32974666 hsa-miR-4498 1 0 0
chr6:32974518|32974666 hsa-miR-4507 1 0 0
chr6:32974518|32974666 hsa-miR-4651 1 0 0
chr6:32974518|32974666 hsa-miR-5087 1 0 0
chr6:32974518|32974666 hsa-miR-5572 1 0 0
chr6:32974518|32974666 hsa-miR-5787 1 0 0
chr6:32974518|32974666 hsa-miR-7150 1 0 0
chr6:32974518|32974666 hsa-miR-92a-1-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6747-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6799-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6728-5p 1 0 0
chr6:32974518|32974666 hsa-miR-3622b-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6721-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6793-5p 1 0 0
chr6:32974518|32974666 hsa-miR-185-3p 1 0 0
chr6:32974518|32974666 hsa-miR-6732-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6798-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6782-5p 1 0 0
chr6:32974518|32974666 hsa-miR-1229-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6784-5p 1 0 0
chr6:32974518|32974666 hsa-miR-1228-5p 1 0 0
chr6:32974518|32974666 hsa-miR-4787-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6800-5p 1 0 0
chr6:32974518|32974666 hsa-miR-2355-3p 1 0 0
chr6:32974518|32974666 hsa-miR-509-3p 1 0 0
chr6:32974518|32974666 hsa-miR-5587-5p 1 0 0
chr6:32974518|32974666 hsa-miR-4763-3p 1 0 0
chr6:32974518|32974666 hsa-miR-6769b-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6787-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6812-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6737-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6752-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6756-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6769a-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6803-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6819-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6842-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6851-5p 1 0 0
chr6:32974518|32974666 hsa-miR-7110-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6722-3p 1 0 0
chr6:32974518|32974666 hsa-miR-6751-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6779-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6808-5p 1 0 0
chr6:32974518|32974666 hsa-miR-7111-5p 1 0 0
chr6:32974518|32974666 hsa-miR-4728-5p 1 0 0
chr6:32974518|32974666 hsa-miR-5189-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6836-5p 1 0 0
chr6:32974518|32974666 hsa-miR-10396b-5p 1 0 0
chr6:32974518|32974666 hsa-miR-1237-5p 1 0 0
chr6:32974518|32974666 hsa-miR-1909-3p 1 0 0
chr6:32974518|32974666 hsa-miR-3940-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6849-5p 1 0 0
chr6:32974518|32974666 hsa-miR-6791-5p 1 0 0
chr6:32974518|32974666 hsa-miR-514b-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:32974518|32974666
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MRALRAPQWLRCLLCNLPLPTHHPRRCPIPKSQDELPT
Nucleotide Sequence ATGAGGGCTTTGAGAGCCCCACAATGGCTTCGGTGCCTGCTTTGCAACTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAGTTACCAACC
CircID chr6:32974518|32974666
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MYEGFESPTMASVPALQLTPANPPPPEVSNPKKPGRVTNQ
Nucleotide Sequence TTGTATGAGGGCTTTGAGAGCCCCACAATGGCTTCGGTGCCTGCTTTGCAACTTACCCCTGCCAACCCACCACCCCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAGTTACCAACCAG
CircID chr6:32974518|32974666
ORF Type ORF3
Protein Length 49
Nucleotide Length 147
Protein Sequence LVGNSSWLFGIGHLRGWWVGRGKLQSRHRSHCGALKALIQERGFSNPLP
Nucleotide Sequence CTGGTTGGTAACTCGTCCTGGCTTTTTGGGATTGGACACCTCCGGGGGTGGTGGGTTGGCAGGGGTAAGTTGCAAAGCAGGCACCGAAGCCATTGTGGGGCTCTCAAAGCCCTCATACAAGAGAGAGGGTTTTCGAATCCTCTTCCC
CircID chr6:32974518|32974666
ORF Type ORF4
Protein Length 48
Nucleotide Length 144
Protein Sequence MVTRPGFLGLDTSGGGGLAGVSCKAGTEAIVGLSKPSYKREGFRILFP
Nucleotide Sequence TTGGTAACTCGTCCTGGCTTTTTGGGATTGGACACCTCCGGGGGTGGTGGGTTGGCAGGGGTAAGTTGCAAAGCAGGCACCGAAGCCATTGTGGGGCTCTCAAAGCCCTCATACAAGAGAGAGGGTTTTCGAATCCTCTTCCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab