CircRNA Information

General Information
circRNA Basic Information
CircID chr6:32980868|32981092
Strand +
CircType exon
Host Gene ENSG00000204256.11;
Algorism CIRI2;
Sequence CTAGCTTAAAATAAATTAGAACAAACAATCTCAAAACAGGGCCCTTAGAAGTGAATAGGGCAGCTGTGGCCTCAGGTAACTCCAGATCAGGGCTTTGCACACTCCCACCCTTGCCCTGCCCCATTTTGAATGGGGGCTCTGTGTCCAAGAGATCACTCCCCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGTCCCTGCATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:32980868|32981092 hsa-miR-19a-5p 0 0 1
chr6:32980868|32981092 hsa-miR-19a-3p 0 0 1
chr6:32980868|32981092 hsa-miR-22-5p 0 0 1
chr6:32980868|32981092 hsa-miR-22-3p 0 0 1
chr6:32980868|32981092 hsa-miR-122-5p 0 0 1
chr6:32980868|32981092 hsa-miR-122-3p 0 0 1
chr6:32980868|32981092 hsa-miR-375-5p 0 0 1
chr6:32980868|32981092 hsa-miR-375-3p 0 0 1
chr6:32980868|32981092 hsa-miR-432-5p 0 0 1
chr6:32980868|32981092 hsa-miR-432-3p 0 0 1
chr6:32980868|32981092 hsa-miR-527 0 0 1
chr6:32980868|32981092 hsa-miR-648 1 1 1
chr6:32980868|32981092 hsa-miR-939-5p 0 0 1
chr6:32980868|32981092 hsa-miR-939-3p 0 0 1
chr6:32980868|32981092 hsa-miR-1291 1 1 1
chr6:32980868|32981092 hsa-miR-1252-5p 0 0 1
chr6:32980868|32981092 hsa-miR-1252-3p 0 0 1
chr6:32980868|32981092 hsa-miR-1225-3p 0 0 1
chr6:32980868|32981092 hsa-miR-486-3p 0 0 1
chr6:32980868|32981092 hsa-miR-146b-3p 0 0 1
chr6:32980868|32981092 hsa-miR-574-5p 0 0 1
chr6:32980868|32981092 hsa-miR-576-5p 0 0 1
chr6:32980868|32981092 hsa-miR-1207-5p 1 1 1
chr6:32980868|32981092 hsa-miR-518a-5p 0 0 1
chr6:32980868|32981092 hsa-miR-1274b 0 0 1
chr6:32980868|32981092 hsa-miR-19b 0 0 1
chr6:32980868|32981092 hsa-miR-516b 0 0 1
chr6:32980868|32981092 hsa-miR-1245 0 0 1
chr6:32980868|32981092 hsa-miR-602 1 0 0
chr6:32980868|32981092 hsa-miR-663a 1 0 0
chr6:32980868|32981092 hsa-miR-658 1 0 0
chr6:32980868|32981092 hsa-miR-762 1 0 0
chr6:32980868|32981092 hsa-miR-1183 1 0 0
chr6:32980868|32981092 hsa-miR-544b 0 1 0
chr6:32980868|32981092 hsa-miR-4260 1 0 0
chr6:32980868|32981092 hsa-miR-4253 1 0 0
chr6:32980868|32981092 hsa-miR-4263 0 1 0
chr6:32980868|32981092 hsa-miR-1268b 1 0 0
chr6:32980868|32981092 hsa-miR-4428 1 0 0
chr6:32980868|32981092 hsa-miR-4452 0 1 0
chr6:32980868|32981092 hsa-miR-4476 1 0 0
chr6:32980868|32981092 hsa-miR-4510 1 0 0
chr6:32980868|32981092 hsa-miR-4516 1 0 0
chr6:32980868|32981092 hsa-miR-4533 1 0 0
chr6:32980868|32981092 hsa-miR-4651 1 0 0
chr6:32980868|32981092 hsa-miR-4654 1 0 0
chr6:32980868|32981092 hsa-miR-4688 1 0 0
chr6:32980868|32981092 hsa-miR-4706 1 0 0
chr6:32980868|32981092 hsa-miR-4739 1 0 0
chr6:32980868|32981092 hsa-miR-4779 1 1 0
chr6:32980868|32981092 hsa-miR-6090 1 0 0
chr6:32980868|32981092 hsa-miR-6127 1 0 0
chr6:32980868|32981092 hsa-miR-6130 1 0 0
chr6:32980868|32981092 hsa-miR-6132 0 1 0
chr6:32980868|32981092 hsa-miR-6133 1 0 0
chr6:32980868|32981092 hsa-miR-12118 1 1 0
chr6:32980868|32981092 hsa-miR-12119 1 0 0
chr6:32980868|32981092 hsa-miR-211-3p 1 0 0
chr6:32980868|32981092 hsa-miR-18a-3p 0 1 0
chr6:32980868|32981092 hsa-miR-504-3p 1 0 0
chr6:32980868|32981092 hsa-miR-6765-5p 1 0 0
chr6:32980868|32981092 hsa-miR-671-5p 1 0 0
chr6:32980868|32981092 hsa-miR-7106-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6894-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6799-5p 1 0 0
chr6:32980868|32981092 hsa-miR-1236-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6880-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4695-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4722-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6890-5p 0 1 0
chr6:32980868|32981092 hsa-miR-6727-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6721-5p 1 0 0
chr6:32980868|32981092 hsa-miR-7845-5p 1 1 0
chr6:32980868|32981092 hsa-miR-3605-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6732-5p 1 0 0
chr6:32980868|32981092 hsa-miR-3126-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6782-5p 0 1 0
chr6:32980868|32981092 hsa-miR-6810-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4436b-5p 1 0 0
chr6:32980868|32981092 hsa-miR-5088-5p 1 0 0
chr6:32980868|32981092 hsa-miR-7109-5p 1 0 0
chr6:32980868|32981092 hsa-miR-1226-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6763-3p 1 0 0
chr6:32980868|32981092 hsa-miR-1229-5p 1 0 0
chr6:32980868|32981092 hsa-miR-619-3p 1 0 0
chr6:32980868|32981092 hsa-miR-6834-5p 1 0 0
chr6:32980868|32981092 hsa-miR-149-3p 1 0 0
chr6:32980868|32981092 hsa-miR-6824-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4740-5p 1 0 0
chr6:32980868|32981092 hsa-miR-5010-5p 1 0 0
chr6:32980868|32981092 hsa-miR-5584-5p 1 0 0
chr6:32980868|32981092 hsa-miR-7112-5p 1 0 0
chr6:32980868|32981092 hsa-miR-7160-3p 1 1 0
chr6:32980868|32981092 hsa-miR-3922-5p 1 0 0
chr6:32980868|32981092 hsa-miR-423-5p 1 0 0
chr6:32980868|32981092 hsa-miR-1296-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4649-3p 0 1 0
chr6:32980868|32981092 hsa-miR-5589-3p 1 0 0
chr6:32980868|32981092 hsa-miR-3670 1 0 0
chr6:32980868|32981092 hsa-miR-4717-5p 0 1 0
chr6:32980868|32981092 hsa-miR-3157-3p 0 1 0
chr6:32980868|32981092 hsa-miR-1233-5p 1 1 0
chr6:32980868|32981092 hsa-miR-1273h-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4763-3p 1 1 0
chr6:32980868|32981092 hsa-miR-6778-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6812-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6816-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6870-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6775-5p 1 1 0
chr6:32980868|32981092 hsa-miR-1343-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6743-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6752-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6754-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6756-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6769a-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6803-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6842-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6851-5p 1 0 0
chr6:32980868|32981092 hsa-miR-11181-3p 1 0 0
chr6:32980868|32981092 hsa-miR-1249-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6722-3p 1 1 0
chr6:32980868|32981092 hsa-miR-6763-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6774-5p 0 1 0
chr6:32980868|32981092 hsa-miR-6779-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6780a-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6797-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6808-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6875-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6879-5p 1 1 0
chr6:32980868|32981092 hsa-miR-4728-5p 1 0 0
chr6:32980868|32981092 hsa-miR-10392-5p 1 0 0
chr6:32980868|32981092 hsa-miR-10396b-5p 1 0 0
chr6:32980868|32981092 hsa-miR-10526-3p 1 0 0
chr6:32980868|32981092 hsa-miR-1237-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4632-5p 1 1 0
chr6:32980868|32981092 hsa-miR-4649-5p 1 0 0
chr6:32980868|32981092 hsa-miR-4749-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6729-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6794-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6795-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6846-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6858-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6883-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6887-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6889-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6799-3p 1 0 0
chr6:32980868|32981092 hsa-miR-1199-5p 1 0 0
chr6:32980868|32981092 hsa-miR-3173-3p 1 1 0
chr6:32980868|32981092 hsa-miR-6891-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6766-5p 1 1 0
chr6:32980868|32981092 hsa-miR-6785-5p 1 0 0
chr6:32980868|32981092 hsa-miR-3184-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6762-5p 1 0 0
chr6:32980868|32981092 hsa-miR-6775-3p 1 0 0
chr6:32980868|32981092 hsa-miR-4694-3p 1 0 0
chr6:32980868|32981092 hsa-miR-196a-1-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:32980868|32981092
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MGALCPRDHSPMGLGIQCCFVHVPPSVNVPAS
Nucleotide Sequence ATGGGGGCTCTGTGTCCAAGAGATCACTCCCCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGTCCCTGCATCC
CircID chr6:32980868|32981092
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MHTPTLALPHFEWGLCVQEITPQWGWEFNVVLSMSLLQ
Nucleotide Sequence TTGCACACTCCCACCCTTGCCCTGCCCCATTTTGAATGGGGGCTCTGTGTCCAAGAGATCACTCCCCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAA
CircID chr6:32980868|32981092
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MPCPILNGGSVSKRSLPNGAGNSMLFCPCPSFSKCPCI
Nucleotide Sequence TTGCCCTGCCCCATTTTGAATGGGGGCTCTGTGTCCAAGAGATCACTCCCCAATGGGGCTGGGAATTCAATGTTGTTTTGTCCATGTCCCTCCTTCAGTAAATGTCCCTGCATC
CircID chr6:32980868|32981092
ORF Type ORF4
Protein Length 54
Nucleotide Length 165
Protein Sequence MDKTTLNSQPHWGVISWTQSPHSKWGRARVGVCKALIWSYLRPQLPYSLLRALF
Nucleotide Sequence ATGGACAAAACAACATTGAATTCCCAGCCCCATTGGGGAGTGATCTCTTGGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGAGTTACCTGAGGCCACAGCTGCCCTATTCACTTCTAAGGGCCCTGTTTTGA
CircID chr6:32980868|32981092
ORF Type ORF5
Protein Length 74
Nucleotide Length 222
Protein Sequence MQGHLLKEGHGQNNIEFPAPLGSDLLDTEPPFKMGQGKGGSVQSPDLELPEATAALFTSKGPVLRLFVLIYFKL
Nucleotide Sequence ATGCAGGGACATTTACTGAAGGAGGGACATGGACAAAACAACATTGAATTCCCAGCCCCATTGGGGAGTGATCTCTTGGACACAGAGCCCCCATTCAAAATGGGGCAGGGCAAGGGTGGGAGTGTGCAAAGCCCTGATCTGGAGTTACCTGAGGCCACAGCTGCCCTATTCACTTCTAAGGGCCCTGTTTTGAGATTGTTTGTTCTAATTTATTTTAAGCTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab