CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33201624|33201853
Strand +
CircType exon
Host Gene ENSG00000112473.15;
Algorism CIRI2;
Sequence TGAGCAAGATCTGAAGTAGAGAGCGATGCCGGGGAGAGTTCGACTCCACGGGGATAAGGAAGAGGACAAAAAATGGAGCTGCTGAGATCAGCACTGTGGCCCCCAGTGCCTGGTGAGGGAGAGTCAAGGTCAAGTACTGTGGAGTTTCCCAACAATCCAGAACCAGCCCTTCTCTCTCCCATCCCCTGGAGACTCACATAAGCCCAGAGAGTGACAGCATCCAGGTCCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33201624|33201853 hsa-miR-192-5p 0 0 1
chr6:33201624|33201853 hsa-miR-192-3p 0 0 1
chr6:33201624|33201853 hsa-miR-214-5p 0 0 1
chr6:33201624|33201853 hsa-miR-214-3p 0 0 1
chr6:33201624|33201853 hsa-miR-215-5p 0 0 1
chr6:33201624|33201853 hsa-miR-215-3p 0 0 1
chr6:33201624|33201853 hsa-miR-136-5p 0 0 1
chr6:33201624|33201853 hsa-miR-136-3p 0 0 1
chr6:33201624|33201853 hsa-miR-185-5p 0 0 1
chr6:33201624|33201853 hsa-miR-185-3p 0 0 1
chr6:33201624|33201853 hsa-miR-326 0 0 1
chr6:33201624|33201853 hsa-miR-492 0 0 1
chr6:33201624|33201853 hsa-miR-612 0 0 1
chr6:33201624|33201853 hsa-miR-619-5p 0 0 1
chr6:33201624|33201853 hsa-miR-619-3p 0 0 1
chr6:33201624|33201853 hsa-miR-626 0 0 1
chr6:33201624|33201853 hsa-miR-627-5p 0 0 1
chr6:33201624|33201853 hsa-miR-627-3p 0 0 1
chr6:33201624|33201853 hsa-miR-631 0 0 1
chr6:33201624|33201853 hsa-miR-637 1 0 1
chr6:33201624|33201853 hsa-miR-646 0 0 1
chr6:33201624|33201853 hsa-miR-668-5p 0 0 1
chr6:33201624|33201853 hsa-miR-668-3p 0 0 1
chr6:33201624|33201853 hsa-miR-766-5p 0 0 1
chr6:33201624|33201853 hsa-miR-766-3p 0 0 1
chr6:33201624|33201853 hsa-miR-922 0 0 1
chr6:33201624|33201853 hsa-miR-924 0 0 1
chr6:33201624|33201853 hsa-miR-1178-5p 0 0 1
chr6:33201624|33201853 hsa-miR-1178-3p 0 0 1
chr6:33201624|33201853 hsa-miR-1226-5p 0 0 1
chr6:33201624|33201853 hsa-miR-1226-3p 0 0 1
chr6:33201624|33201853 hsa-miR-1236-5p 0 0 1
chr6:33201624|33201853 hsa-miR-1236-3p 0 0 1
chr6:33201624|33201853 hsa-miR-1299 0 0 1
chr6:33201624|33201853 hsa-miR-129-5p 0 0 1
chr6:33201624|33201853 hsa-miR-512-3p 1 0 1
chr6:33201624|33201853 hsa-miR-1289 0 0 1
chr6:33201624|33201853 hsa-miR-330-5p 0 0 1
chr6:33201624|33201853 hsa-miR-128 0 0 1
chr6:33201624|33201853 hsa-miR-1285 0 0 1
chr6:33201624|33201853 hsa-miR-516b 0 0 1
chr6:33201624|33201853 hsa-miR-101 0 0 1
chr6:33201624|33201853 hsa-miR-608 1 0 0
chr6:33201624|33201853 hsa-miR-760 1 0 0
chr6:33201624|33201853 hsa-miR-2861 1 0 0
chr6:33201624|33201853 hsa-miR-3183 1 0 0
chr6:33201624|33201853 hsa-miR-2392 1 0 0
chr6:33201624|33201853 hsa-miR-4535 1 0 0
chr6:33201624|33201853 hsa-miR-1587 1 0 0
chr6:33201624|33201853 hsa-miR-4651 1 0 0
chr6:33201624|33201853 hsa-miR-5739 1 0 0
chr6:33201624|33201853 hsa-miR-6090 1 0 0
chr6:33201624|33201853 hsa-miR-4731-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6861-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6746-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6842-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6787-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6793-5p 1 0 0
chr6:33201624|33201853 hsa-miR-877-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6798-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6782-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6763-3p 1 0 0
chr6:33201624|33201853 hsa-miR-7113-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6749-5p 1 0 0
chr6:33201624|33201853 hsa-miR-149-3p 1 0 0
chr6:33201624|33201853 hsa-miR-3925-3p 1 0 0
chr6:33201624|33201853 hsa-miR-3605-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6800-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6503-3p 1 0 0
chr6:33201624|33201853 hsa-miR-6870-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6775-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6726-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6752-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6756-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6803-5p 1 0 0
chr6:33201624|33201853 hsa-miR-7110-5p 1 0 0
chr6:33201624|33201853 hsa-miR-1249-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6751-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6779-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6780a-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6797-5p 1 0 0
chr6:33201624|33201853 hsa-miR-3620-5p 1 0 0
chr6:33201624|33201853 hsa-miR-5189-5p 1 0 0
chr6:33201624|33201853 hsa-miR-5196-5p 1 0 0
chr6:33201624|33201853 hsa-miR-4685-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6858-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6731-5p 1 0 0
chr6:33201624|33201853 hsa-miR-6762-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:33201624|33201853
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MELLRSALWPPVPGEGESRSSTVEFPNNPEPALLSPIPWRLT
Nucleotide Sequence ATGGAGCTGCTGAGATCAGCACTGTGGCCCCCAGTGCCTGGTGAGGGAGAGTCAAGGTCAAGTACTGTGGAGTTTCCCAACAATCCAGAACCAGCCCTTCTCTCTCCCATCCCCTGGAGACTCACATAA

CircID chr6:33201624|33201853
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MVRESQGQVLWSFPTIQNQPFSLPSPGDSHKPRE
Nucleotide Sequence CTGGTGAGGGAGAGTCAAGGTCAAGTACTGTGGAGTTTCCCAACAATCCAGAACCAGCCCTTCTCTCTCCCATCCCCTGGAGACTCACATAAGCCCAGAGAGTGA

CircID chr6:33201624|33201853
ORF Type ORF3
Protein Length 74
Nucleotide Length 222
Protein Sequence MDAVTLWAYVSLQGMGERRAGSGLLGNSTVLDLDSPSPGTGGHSADLSSSIFCPLPYPRGVELSPASLSTSDLA
Nucleotide Sequence CTGGATGCTGTCACTCTCTGGGCTTATGTGAGTCTCCAGGGGATGGGAGAGAGAAGGGCTGGTTCTGGATTGTTGGGAAACTCCACAGTACTTGACCTTGACTCTCCCTCACCAGGCACTGGGGGCCACAGTGCTGATCTCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGAGTCGAACTCTCCCCGGCATCGCTCTCTACTTCAGATCTTGCT

CircID chr6:33201624|33201853
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MVLDCWETPQYLTLTLPHQALGATVLISAAPFFVLFLIPVESNSPRHRSLLQILL
Nucleotide Sequence CTGGTTCTGGATTGTTGGGAAACTCCACAGTACTTGACCTTGACTCTCCCTCACCAGGCACTGGGGGCCACAGTGCTGATCTCAGCAGCTCCATTTTTTGTCCTCTTCCTTATCCCCGTGGAGTCGAACTCTCCCCGGCATCGCTCTCTACTTCAGATCTTGCTC

CircID chr6:33201624|33201853
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MGLCESPGDGREKGWFWIVGKLHST
Nucleotide Sequence CTGGGCTTATGTGAGTCTCCAGGGGATGGGAGAGAGAAGGGCTGGTTCTGGATTGTTGGGAAACTCCACAGTACTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites