CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33203749|33203924
Strand -
CircType exon
Host Gene ENSG00000112473.15;
Algorism CIRI2;
Sequence TTCTGGAGGTGCTGGGGCTGCTGGGGGGAGTTATCATGATGGTGCTGATTGCCCACCTTGAGTGAGGGGTGGATAAACTACCCCTGCCCCAAACCTCTACCCCTAACTCCAGGTCAGGGGTGCGTAGAGGTTGGGGGCCCTGGCCAGGGACATCTGCCAAAGGAAGGAACTGTAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33203749|33203924 hsa-miR-29a-5p 0 0 1
chr6:33203749|33203924 hsa-miR-29a-3p 0 0 1
chr6:33203749|33203924 hsa-miR-96-5p 0 0 1
chr6:33203749|33203924 hsa-miR-96-3p 0 0 1
chr6:33203749|33203924 hsa-miR-182-5p 0 0 1
chr6:33203749|33203924 hsa-miR-182-3p 0 0 1
chr6:33203749|33203924 hsa-miR-29c-5p 0 0 1
chr6:33203749|33203924 hsa-miR-29c-3p 0 0 1
chr6:33203749|33203924 hsa-miR-433-5p 0 0 1
chr6:33203749|33203924 hsa-miR-433-3p 0 0 1
chr6:33203749|33203924 hsa-miR-619-5p 0 0 1
chr6:33203749|33203924 hsa-miR-619-3p 0 0 1
chr6:33203749|33203924 hsa-miR-631 0 0 1
chr6:33203749|33203924 hsa-miR-1271-5p 0 0 1
chr6:33203749|33203924 hsa-miR-1271-3p 0 0 1
chr6:33203749|33203924 hsa-miR-541-5p 0 0 1
chr6:33203749|33203924 hsa-miR-541-3p 0 0 1
chr6:33203749|33203924 hsa-miR-139-5p 1 0 1
chr6:33203749|33203924 hsa-miR-296-5p 0 1 1
chr6:33203749|33203924 hsa-miR-486-3p 0 0 1
chr6:33203749|33203924 hsa-miR-767-5p 0 0 1
chr6:33203749|33203924 hsa-miR-654-5p 0 1 1
chr6:33203749|33203924 hsa-miR-361-3p 0 0 1
chr6:33203749|33203924 hsa-miR-582-5p 0 0 1
chr6:33203749|33203924 hsa-miR-1207-5p 0 0 1
chr6:33203749|33203924 hsa-miR-521 0 0 1
chr6:33203749|33203924 hsa-miR-29b 0 0 1
chr6:33203749|33203924 hsa-miR-608 0 1 0
chr6:33203749|33203924 hsa-miR-612 0 1 0
chr6:33203749|33203924 hsa-miR-548v 0 1 0
chr6:33203749|33203924 hsa-miR-4323 0 1 0
chr6:33203749|33203924 hsa-miR-4260 0 1 0
chr6:33203749|33203924 hsa-miR-4748 0 1 0
chr6:33203749|33203924 hsa-miR-5682 0 1 0
chr6:33203749|33203924 hsa-miR-6069 0 1 0
chr6:33203749|33203924 hsa-miR-6070 1 0 0
chr6:33203749|33203924 hsa-miR-12127 0 1 0
chr6:33203749|33203924 hsa-miR-4435 0 1 0
chr6:33203749|33203924 hsa-miR-4653-3p 0 1 0
chr6:33203749|33203924 hsa-miR-6875-3p 1 0 0
chr6:33203749|33203924 hsa-miR-6721-5p 0 1 0
chr6:33203749|33203924 hsa-miR-197-5p 0 1 0
chr6:33203749|33203924 hsa-miR-6849-3p 0 1 0
chr6:33203749|33203924 hsa-miR-6782-5p 0 1 0
chr6:33203749|33203924 hsa-miR-1229-5p 0 1 0
chr6:33203749|33203924 hsa-miR-3679-3p 0 1 0
chr6:33203749|33203924 hsa-miR-3667-3p 0 1 0
chr6:33203749|33203924 hsa-miR-3065-3p 0 1 0
chr6:33203749|33203924 hsa-miR-7160-3p 0 1 0
chr6:33203749|33203924 hsa-miR-4732-3p 0 1 0
chr6:33203749|33203924 hsa-miR-6793-3p 0 1 0
chr6:33203749|33203924 hsa-miR-4761-5p 0 1 0
chr6:33203749|33203924 hsa-miR-5088-3p 1 0 0
chr6:33203749|33203924 hsa-miR-5584-3p 0 1 0
chr6:33203749|33203924 hsa-miR-3617-3p 0 1 0
chr6:33203749|33203924 hsa-miR-29b-3p 0 1 0
chr6:33203749|33203924 hsa-miR-4764-3p 0 1 0
chr6:33203749|33203924 hsa-miR-4763-3p 0 1 0
chr6:33203749|33203924 hsa-miR-6803-5p 0 1 0
chr6:33203749|33203924 hsa-miR-6722-3p 0 1 0
chr6:33203749|33203924 hsa-miR-6751-5p 0 1 0
chr6:33203749|33203924 hsa-miR-1909-3p 0 1 0
chr6:33203749|33203924 hsa-miR-6855-5p 0 1 0
chr6:33203749|33203924 hsa-miR-6837-5p 0 1 0
chr6:33203749|33203924 hsa-miR-10394-5p 1 0 0
chr6:33203749|33203924 hsa-miR-498-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:33203749|33203924
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MPTLSEGWINYPCPKPLPLTPGQGCVEVGGPGQGHLPKEGTV
Nucleotide Sequence TTGCCCACCTTGAGTGAGGGGTGGATAAACTACCCCTGCCCCAAACCTCTACCCCTAACTCCAGGTCAGGGGTGCGTAGAGGTTGGGGGCCCTGGCCAGGGACATCTGCCAAAGGAAGGAACTGTA

CircID chr6:33203749|33203924
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MPQTSTPNSRSGVRRGWGPWPGTSAKGRNCS
Nucleotide Sequence CTGCCCCAAACCTCTACCCCTAACTCCAGGTCAGGGGTGCGTAGAGGTTGGGGGCCCTGGCCAGGGACATCTGCCAAAGGAAGGAACTGTAGC

CircID chr6:33203749|33203924
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MADVPGQGPQPLRTPDLELGVEVWGRGSLSTPHSRWAISTIMITPPSSPSTSR
Nucleotide Sequence TTGGCAGATGTCCCTGGCCAGGGCCCCCAACCTCTACGCACCCCTGACCTGGAGTTAGGGGTAGAGGTTTGGGGCAGGGGTAGTTTATCCACCCCTCACTCAAGGTGGGCAATCAGCACCATCATGATAACTCCCCCCAGCAGCCCCAGCACCTCCAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites