CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33204076|33204236
Strand +
CircType exon
Host Gene ENSG00000112473.15;
Algorism CIRI2;
Sequence CCTCTCTGTCCAGGACTCTGGTCTTCCCTGAAGCCTCCACCAACTGGTGGGAGAAAGGAAACTGGACCTTGGAGAACTTCCTGTGTAGCAACTTGGTTCTCCGAGAACAGGTGGGGTAGGGGACACCAGGTAGGCTGCCATCACCCCCTGTCCCTTCCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33204076|33204236 hsa-miR-221-5p 0 0 1
chr6:33204076|33204236 hsa-miR-221-3p 0 0 1
chr6:33204076|33204236 hsa-miR-222-5p 0 0 1
chr6:33204076|33204236 hsa-miR-222-3p 0 0 1
chr6:33204076|33204236 hsa-miR-150-5p 0 0 1
chr6:33204076|33204236 hsa-miR-150-3p 0 0 1
chr6:33204076|33204236 hsa-miR-589-5p 0 0 1
chr6:33204076|33204236 hsa-miR-589-3p 0 0 1
chr6:33204076|33204236 hsa-miR-619-5p 0 0 1
chr6:33204076|33204236 hsa-miR-619-3p 0 0 1
chr6:33204076|33204236 hsa-miR-650 0 0 1
chr6:33204076|33204236 hsa-miR-145-5p 0 1 1
chr6:33204076|33204236 hsa-miR-532-3p 0 0 1
chr6:33204076|33204236 hsa-miR-885-3p 0 0 1
chr6:33204076|33204236 hsa-miR-1224-3p 0 1 1
chr6:33204076|33204236 hsa-miR-515-5p 0 0 1
chr6:33204076|33204236 hsa-miR-1260 0 0 1
chr6:33204076|33204236 hsa-miR-1280 0 0 1
chr6:33204076|33204236 hsa-miR-7 0 0 1
chr6:33204076|33204236 hsa-miR-3188 0 1 0
chr6:33204076|33204236 hsa-miR-4298 1 1 0
chr6:33204076|33204236 hsa-miR-3714 1 0 0
chr6:33204076|33204236 hsa-miR-4518 0 1 0
chr6:33204076|33204236 hsa-miR-7515 0 1 0
chr6:33204076|33204236 hsa-miR-9898 1 0 0
chr6:33204076|33204236 hsa-miR-12128 0 1 0
chr6:33204076|33204236 hsa-miR-7-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6880-5p 0 1 0
chr6:33204076|33204236 hsa-miR-7847-3p 0 1 0
chr6:33204076|33204236 hsa-miR-7154-3p 0 1 0
chr6:33204076|33204236 hsa-miR-6762-3p 1 0 0
chr6:33204076|33204236 hsa-miR-6721-5p 0 1 0
chr6:33204076|33204236 hsa-miR-7845-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6768-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6732-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6798-5p 0 1 0
chr6:33204076|33204236 hsa-miR-4713-5p 0 1 0
chr6:33204076|33204236 hsa-miR-3202 0 1 0
chr6:33204076|33204236 hsa-miR-4787-5p 1 1 0
chr6:33204076|33204236 hsa-miR-149-3p 1 1 0
chr6:33204076|33204236 hsa-miR-3925-3p 0 1 0
chr6:33204076|33204236 hsa-miR-6770-3p 1 0 0
chr6:33204076|33204236 hsa-miR-3162-3p 0 1 0
chr6:33204076|33204236 hsa-miR-4763-3p 0 1 0
chr6:33204076|33204236 hsa-miR-6743-5p 1 1 0
chr6:33204076|33204236 hsa-miR-6752-5p 1 1 0
chr6:33204076|33204236 hsa-miR-6842-5p 0 1 0
chr6:33204076|33204236 hsa-miR-7110-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6751-5p 1 0 0
chr6:33204076|33204236 hsa-miR-6779-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6797-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6848-5p 1 0 0
chr6:33204076|33204236 hsa-miR-6785-5p 0 1 0
chr6:33204076|33204236 hsa-miR-6810-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:33204076|33204236
ORF Type ORF1
Protein Length 44
Nucleotide Length 132
Protein Sequence MKPPPTGGRKETGPWRTSCVATWFSENRWGRGHQVGCHHPLSLP
Nucleotide Sequence CTGAAGCCTCCACCAACTGGTGGGAGAAAGGAAACTGGACCTTGGAGAACTTCCTGTGTAGCAACTTGGTTCTCCGAGAACAGGTGGGGTAGGGGACACCAGGTAGGCTGCCATCACCCCCTGTCCCTTCCA
CircID chr6:33204076|33204236
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MSRTLVFPEASTNWWEKGNWTLENFLCSNLVLREQVG
Nucleotide Sequence CTGTCCAGGACTCTGGTCTTCCCTGAAGCCTCCACCAACTGGTGGGAGAAAGGAAACTGGACCTTGGAGAACTTCCTGTGTAGCAACTTGGTTCTCCGAGAACAGGTGGGGTAG
CircID chr6:33204076|33204236
ORF Type ORF3
Protein Length 36
Nucleotide Length 108
Protein Sequence MFSENQVATQEVLQGPVSFLPPVGGGFREDQSPGQR
Nucleotide Sequence CTGTTCTCGGAGAACCAAGTTGCTACACAGGAAGTTCTCCAAGGTCCAGTTTCCTTTCTCCCACCAGTTGGTGGAGGCTTCAGGGAAGACCAGAGTCCTGGACAGAGA
CircID chr6:33204076|33204236
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence LEGTGGDGSLPGVPYPTCSRRTKLLHRKFSKVQFPFSHQLVEASGKTRVLDRE
Nucleotide Sequence CTGGAAGGGACAGGGGGTGATGGCAGCCTACCTGGTGTCCCCTACCCCACCTGTTCTCGGAGAACCAAGTTGCTACACAGGAAGTTCTCCAAGGTCCAGTTTCCTTTCTCCCACCAGTTGGTGGAGGCTTCAGGGAAGACCAGAGTCCTGGACAGAGAG
CircID chr6:33204076|33204236
ORF Type ORF5
Protein Length 47
Nucleotide Length 141
Protein Sequence MAAYLVSPTPPVLGEPSCYTGSSPRSSFLSPTSWWRLQGRPESWTER
Nucleotide Sequence ATGGCAGCCTACCTGGTGTCCCCTACCCCACCTGTTCTCGGAGAACCAAGTTGCTACACAGGAAGTTCTCCAAGGTCCAGTTTCCTTTCTCCCACCAGTTGGTGGAGGCTTCAGGGAAGACCAGAGTCCTGGACAGAGAGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab