CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33263484|33263829
Strand -
CircType exon
Host Gene ENSG00000223501.7;
Algorism CIRI2;
Sequence CTGTGTCCGAGCATTGAGCAGCTGCTGGAAGCTCTCAACCTCTTTGCTGTCATCTGCAGCCCGCTCCTAAGGGAAGACAAAGGGAAATGTCTAGTTTGGGGAAAGCAGTCCTTCACTTCAGGATGTCCCCTTCATTCCACACTTATTGTACTAAGCTGGACACTGTGCCAGACTCCAAGAGTAAAACACTGAACAAGACAGGCATCATCTCTGCCCTCACAGAGCTAACAGCAGTGGGGGAAACCGAATTTTCTGGGTAGGAAGGCAAGGAGAAGGAGCACCTATTACCATCAGCACACCCAGCATCATGTCATAGTTGTTGATCAGAAACACAAGCTGCTCCTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33263484|33263829 hsa-miR-198 0 0 1
chr6:33263484|33263829 hsa-miR-204-5p 0 0 1
chr6:33263484|33263829 hsa-miR-204-3p 0 0 1
chr6:33263484|33263829 hsa-miR-211-5p 0 0 1
chr6:33263484|33263829 hsa-miR-211-3p 0 0 1
chr6:33263484|33263829 hsa-miR-143-5p 0 0 1
chr6:33263484|33263829 hsa-miR-143-3p 0 0 1
chr6:33263484|33263829 hsa-miR-206 0 0 1
chr6:33263484|33263829 hsa-miR-425-5p 0 0 1
chr6:33263484|33263829 hsa-miR-425-3p 0 0 1
chr6:33263484|33263829 hsa-miR-431-5p 0 0 1
chr6:33263484|33263829 hsa-miR-431-3p 0 0 1
chr6:33263484|33263829 hsa-miR-511-5p 0 0 1
chr6:33263484|33263829 hsa-miR-511-3p 0 0 1
chr6:33263484|33263829 hsa-miR-432-5p 0 0 1
chr6:33263484|33263829 hsa-miR-432-3p 0 0 1
chr6:33263484|33263829 hsa-miR-545-5p 0 0 1
chr6:33263484|33263829 hsa-miR-545-3p 0 0 1
chr6:33263484|33263829 hsa-miR-573 0 1 1
chr6:33263484|33263829 hsa-miR-581 0 1 1
chr6:33263484|33263829 hsa-miR-583 0 0 1
chr6:33263484|33263829 hsa-miR-595 0 0 1
chr6:33263484|33263829 hsa-miR-609 0 0 1
chr6:33263484|33263829 hsa-miR-613 0 0 1
chr6:33263484|33263829 hsa-miR-623 0 0 1
chr6:33263484|33263829 hsa-miR-646 0 1 1
chr6:33263484|33263829 hsa-miR-708-5p 0 0 1
chr6:33263484|33263829 hsa-miR-708-3p 0 0 1
chr6:33263484|33263829 hsa-miR-1237-5p 0 0 1
chr6:33263484|33263829 hsa-miR-1237-3p 0 0 1
chr6:33263484|33263829 hsa-miR-1294 0 0 1
chr6:33263484|33263829 hsa-miR-1248 0 0 1
chr6:33263484|33263829 hsa-miR-1288-5p 0 0 1
chr6:33263484|33263829 hsa-miR-1288-3p 0 0 1
chr6:33263484|33263829 hsa-miR-1252-5p 0 0 1
chr6:33263484|33263829 hsa-miR-1252-3p 0 0 1
chr6:33263484|33263829 hsa-miR-1322 0 1 1
chr6:33263484|33263829 hsa-miR-423-3p 0 0 1
chr6:33263484|33263829 hsa-miR-1289 0 0 1
chr6:33263484|33263829 hsa-miR-361-3p 0 0 1
chr6:33263484|33263829 hsa-miR-28-5p 0 0 1
chr6:33263484|33263829 hsa-miR-502-5p 0 0 1
chr6:33263484|33263829 hsa-miR-767-3p 0 0 1
chr6:33263484|33263829 hsa-miR-338-5p 0 0 1
chr6:33263484|33263829 hsa-miR-338-3p 0 0 1
chr6:33263484|33263829 hsa-miR-128 0 0 1
chr6:33263484|33263829 hsa-miR-1 0 0 1
chr6:33263484|33263829 hsa-miR-564 1 1 0
chr6:33263484|33263829 hsa-miR-764 1 1 0
chr6:33263484|33263829 hsa-miR-1976 1 0 0
chr6:33263484|33263829 hsa-miR-2278 0 1 0
chr6:33263484|33263829 hsa-miR-4297 0 1 0
chr6:33263484|33263829 hsa-miR-4286 0 1 0
chr6:33263484|33263829 hsa-miR-3685 0 1 0
chr6:33263484|33263829 hsa-miR-3911 1 1 0
chr6:33263484|33263829 hsa-miR-4656 1 0 0
chr6:33263484|33263829 hsa-miR-4658 1 0 0
chr6:33263484|33263829 hsa-miR-4675 1 1 0
chr6:33263484|33263829 hsa-miR-4741 1 0 0
chr6:33263484|33263829 hsa-miR-4767 1 0 0
chr6:33263484|33263829 hsa-miR-5090 1 0 0
chr6:33263484|33263829 hsa-miR-6086 0 1 0
chr6:33263484|33263829 hsa-miR-8075 0 1 0
chr6:33263484|33263829 hsa-miR-12127 0 1 0
chr6:33263484|33263829 hsa-miR-150-3p 1 0 0
chr6:33263484|33263829 hsa-miR-4433b-3p 1 0 0
chr6:33263484|33263829 hsa-miR-6734-5p 1 0 0
chr6:33263484|33263829 hsa-miR-31-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6836-3p 1 0 0
chr6:33263484|33263829 hsa-miR-6861-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6833-5p 0 1 0
chr6:33263484|33263829 hsa-miR-5187-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6875-3p 1 0 0
chr6:33263484|33263829 hsa-miR-197-5p 1 0 0
chr6:33263484|33263829 hsa-miR-5589-5p 1 1 0
chr6:33263484|33263829 hsa-miR-4728-3p 1 0 0
chr6:33263484|33263829 hsa-miR-1915-5p 1 1 0
chr6:33263484|33263829 hsa-miR-1292-5p 1 0 0
chr6:33263484|33263829 hsa-miR-3180-3p 1 0 0
chr6:33263484|33263829 hsa-miR-6796-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6868-3p 0 1 0
chr6:33263484|33263829 hsa-miR-6829-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6805-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6772-3p 0 1 0
chr6:33263484|33263829 hsa-miR-1226-5p 1 1 0
chr6:33263484|33263829 hsa-miR-4763-5p 1 0 0
chr6:33263484|33263829 hsa-miR-7113-3p 1 0 0
chr6:33263484|33263829 hsa-miR-1228-5p 1 0 0
chr6:33263484|33263829 hsa-miR-3667-3p 0 1 0
chr6:33263484|33263829 hsa-miR-4756-3p 0 1 0
chr6:33263484|33263829 hsa-miR-4446-5p 0 1 0
chr6:33263484|33263829 hsa-miR-3616-3p 1 1 0
chr6:33263484|33263829 hsa-miR-6864-5p 0 1 0
chr6:33263484|33263829 hsa-miR-3191-3p 1 0 0
chr6:33263484|33263829 hsa-miR-2115-5p 0 1 0
chr6:33263484|33263829 hsa-miR-1250-5p 1 0 0
chr6:33263484|33263829 hsa-miR-4762-3p 0 1 0
chr6:33263484|33263829 hsa-miR-6872-3p 1 0 0
chr6:33263484|33263829 hsa-miR-5088-3p 1 0 0
chr6:33263484|33263829 hsa-miR-2277-5p 1 0 0
chr6:33263484|33263829 hsa-miR-7158-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6505-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6733-3p 0 1 0
chr6:33263484|33263829 hsa-miR-4677-3p 0 1 0
chr6:33263484|33263829 hsa-miR-5089-3p 1 0 0
chr6:33263484|33263829 hsa-miR-5586-5p 0 1 0
chr6:33263484|33263829 hsa-miR-4763-3p 1 0 0
chr6:33263484|33263829 hsa-miR-6816-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6775-5p 1 0 0
chr6:33263484|33263829 hsa-miR-1343-5p 1 0 0
chr6:33263484|33263829 hsa-miR-3180 1 0 0
chr6:33263484|33263829 hsa-miR-5001-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6743-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6797-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6879-5p 1 1 0
chr6:33263484|33263829 hsa-miR-320a-5p 0 1 0
chr6:33263484|33263829 hsa-miR-4755-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6866-3p 0 1 0
chr6:33263484|33263829 hsa-miR-4728-5p 1 0 0
chr6:33263484|33263829 hsa-miR-5196-5p 1 0 0
chr6:33263484|33263829 hsa-miR-4632-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6735-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6848-5p 1 0 0
chr6:33263484|33263829 hsa-miR-7843-5p 0 1 0
chr6:33263484|33263829 hsa-miR-6750-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6785-5p 1 0 0
chr6:33263484|33263829 hsa-miR-6790-5p 1 1 0
chr6:33263484|33263829 hsa-miR-6791-5p 1 0 0
chr6:33263484|33263829 hsa-miR-549a-3p 0 1 0
chr6:33263484|33263829 hsa-miR-9902 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:33263484|33263829
ORF Type ORF1
Protein Length 63
Nucleotide Length 192
Protein Sequence LCPSIEQLLEALNLFAVICSPLLREDKGKCLVWGKQSFTSGCPLHSTLIVLSWTLCQTPRVKH
Nucleotide Sequence CTGTGTCCGAGCATTGAGCAGCTGCTGGAAGCTCTCAACCTCTTTGCTGTCATCTGCAGCCCGCTCCTAAGGGAAGACAAAGGGAAATGTCTAGTTTGGGGAAAGCAGTCCTTCACTTCAGGATGTCCCCTTCATTCCACACTTATTGTACTAAGCTGGACACTGTGCCAGACTCCAAGAGTAAAACACTGA
CircID chr6:33263484|33263829
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MGRKARRRSTYYHQHTQHHVIVVDQKHKLLL
Nucleotide Sequence CTGGGTAGGAAGGCAAGGAGAAGGAGCACCTATTACCATCAGCACACCCAGCATCATGTCATAGTTGTTGATCAGAAACACAAGCTGCTCCTT
CircID chr6:33263484|33263829
ORF Type ORF3
Protein Length 68
Nucleotide Length 207
Protein Sequence MQPAPKGRQREMSSLGKAVLHFRMSPSFHTYCTKLDTVPDSKSKTLNKTGIISALTELTAVGETEFSG
Nucleotide Sequence CTGCAGCCCGCTCCTAAGGGAAGACAAAGGGAAATGTCTAGTTTGGGGAAAGCAGTCCTTCACTTCAGGATGTCCCCTTCATTCCACACTTATTGTACTAAGCTGGACACTGTGCCAGACTCCAAGAGTAAAACACTGAACAAGACAGGCATCATCTCTGCCCTCACAGAGCTAACAGCAGTGGGGGAAACCGAATTTTCTGGGTAG
CircID chr6:33263484|33263829
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MPSYPENSVSPTAVSSVRAEMMPVLFSVLLLESGTVSSLVQ
Nucleotide Sequence TTGCCTTCCTACCCAGAAAATTCGGTTTCCCCCACTGCTGTTAGCTCTGTGAGGGCAGAGATGATGCCTGTCTTGTTCAGTGTTTTACTCTTGGAGTCTGGCACAGTGTCCAGCTTAGTACAATAA
CircID chr6:33263484|33263829
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MINNYDMMLGVLMVIGAPSPCLPTQKIRFPPLLLAL
Nucleotide Sequence CTGATCAACAACTATGACATGATGCTGGGTGTGCTGATGGTAATAGGTGCTCCTTCTCCTTGCCTTCCTACCCAGAAAATTCGGTTTCCCCCACTGCTGTTAGCTCTGTGA
CircID chr6:33263484|33263829
ORF Type ORF6
Protein Length 26
Nucleotide Length 78
Protein Sequence MSSLRSGLQMTAKRLRASSSCSMLGH
Nucleotide Sequence TTGTCTTCCCTTAGGAGCGGGCTGCAGATGACAGCAAAGAGGTTGAGAGCTTCCAGCAGCTGCTCAATGCTCGGACAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab