CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33287127|33287395
Strand +
CircType exon
Host Gene ENSG00000227057.6;
Algorism CIRI2;
Sequence GGCTTGAGTTCCTGCCCTTCCACTTCCTCCTGGCTACAGCTGTGAGTGGCCATGGAGCTCAGGAACTGGTTGGAAGCCCTTGGGATGACCACCTCTCCTTTAGGACCCCAGCAGAGGGAATACAGAGGGCAATCAGGACTGGGTCATTCTCTCTGTCTTTCTCTCTCAGTCAGAAACAGGGTTTCTAACCTACCTGGATGTGTCAGTGGGGAAGATTGTGGCAGCTCTGAATGCTCGAGCTGGGCGGCTCGATGTTATGAGTCAGAACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33287127|33287395 hsa-miR-22-5p 0 0 1
chr6:33287127|33287395 hsa-miR-22-3p 0 0 1
chr6:33287127|33287395 hsa-miR-10a-5p 0 0 1
chr6:33287127|33287395 hsa-miR-10a-3p 0 0 1
chr6:33287127|33287395 hsa-miR-10b-5p 0 0 1
chr6:33287127|33287395 hsa-miR-10b-3p 0 0 1
chr6:33287127|33287395 hsa-miR-154-5p 0 0 1
chr6:33287127|33287395 hsa-miR-154-3p 0 0 1
chr6:33287127|33287395 hsa-miR-345-5p 0 0 1
chr6:33287127|33287395 hsa-miR-345-3p 0 0 1
chr6:33287127|33287395 hsa-miR-558 0 0 1
chr6:33287127|33287395 hsa-miR-575 0 0 1
chr6:33287127|33287395 hsa-miR-588 0 0 1
chr6:33287127|33287395 hsa-miR-630 0 0 1
chr6:33287127|33287395 hsa-miR-874-5p 0 0 1
chr6:33287127|33287395 hsa-miR-874-3p 0 0 1
chr6:33287127|33287395 hsa-miR-665 0 1 1
chr6:33287127|33287395 hsa-miR-873-5p 0 0 1
chr6:33287127|33287395 hsa-miR-873-3p 0 0 1
chr6:33287127|33287395 hsa-miR-1179 0 0 1
chr6:33287127|33287395 hsa-miR-1200 0 1 1
chr6:33287127|33287395 hsa-miR-615-5p 0 0 1
chr6:33287127|33287395 hsa-miR-323-5p 0 0 1
chr6:33287127|33287395 hsa-miR-642 0 0 1
chr6:33287127|33287395 hsa-miR-1274b 0 0 1
chr6:33287127|33287395 hsa-miR-551a 0 1 0
chr6:33287127|33287395 hsa-miR-608 1 0 0
chr6:33287127|33287395 hsa-miR-3137 1 1 0
chr6:33287127|33287395 hsa-miR-3170 0 1 0
chr6:33287127|33287395 hsa-miR-4306 0 1 0
chr6:33287127|33287395 hsa-miR-3916 0 1 0
chr6:33287127|33287395 hsa-miR-4510 0 1 0
chr6:33287127|33287395 hsa-miR-4644 0 1 0
chr6:33287127|33287395 hsa-miR-4663 1 1 0
chr6:33287127|33287395 hsa-miR-5192 1 0 0
chr6:33287127|33287395 hsa-miR-5787 1 0 0
chr6:33287127|33287395 hsa-miR-6127 0 1 0
chr6:33287127|33287395 hsa-miR-8085 0 1 0
chr6:33287127|33287395 hsa-miR-8089 1 0 0
chr6:33287127|33287395 hsa-miR-18a-3p 0 1 0
chr6:33287127|33287395 hsa-miR-4731-5p 0 1 0
chr6:33287127|33287395 hsa-miR-7155-5p 0 1 0
chr6:33287127|33287395 hsa-miR-4687-3p 1 0 0
chr6:33287127|33287395 hsa-miR-3692-3p 0 1 0
chr6:33287127|33287395 hsa-miR-766-5p 0 1 0
chr6:33287127|33287395 hsa-miR-6873-5p 0 1 0
chr6:33287127|33287395 hsa-miR-7160-5p 1 0 0
chr6:33287127|33287395 hsa-miR-6721-5p 0 1 0
chr6:33287127|33287395 hsa-miR-181a-2-3p 0 1 0
chr6:33287127|33287395 hsa-miR-6782-5p 1 0 0
chr6:33287127|33287395 hsa-miR-6852-5p 0 1 0
chr6:33287127|33287395 hsa-miR-185-5p 0 1 0
chr6:33287127|33287395 hsa-miR-3677-3p 1 0 0
chr6:33287127|33287395 hsa-miR-3202 0 1 0
chr6:33287127|33287395 hsa-miR-6780a-3p 0 1 0
chr6:33287127|33287395 hsa-miR-6824-5p 1 0 0
chr6:33287127|33287395 hsa-miR-3162-5p 1 0 0
chr6:33287127|33287395 hsa-miR-6878-5p 0 1 0
chr6:33287127|33287395 hsa-miR-2115-5p 0 1 0
chr6:33287127|33287395 hsa-miR-4742-3p 0 1 0
chr6:33287127|33287395 hsa-miR-3158-3p 0 1 0
chr6:33287127|33287395 hsa-miR-584-3p 0 1 0
chr6:33287127|33287395 hsa-miR-1910-5p 0 1 0
chr6:33287127|33287395 hsa-miR-2276-5p 0 1 0
chr6:33287127|33287395 hsa-miR-671-3p 0 1 0
chr6:33287127|33287395 hsa-miR-6761-5p 0 1 0
chr6:33287127|33287395 hsa-miR-1227-3p 0 1 0
chr6:33287127|33287395 hsa-miR-449b-3p 1 0 0
chr6:33287127|33287395 hsa-miR-888-3p 0 1 0
chr6:33287127|33287395 hsa-miR-431-3p 1 0 0
chr6:33287127|33287395 hsa-miR-6778-5p 1 1 0
chr6:33287127|33287395 hsa-miR-6812-5p 1 0 0
chr6:33287127|33287395 hsa-miR-6819-5p 1 0 0
chr6:33287127|33287395 hsa-miR-6851-5p 1 0 0
chr6:33287127|33287395 hsa-miR-1249-5p 0 1 0
chr6:33287127|33287395 hsa-miR-6722-3p 1 0 0
chr6:33287127|33287395 hsa-miR-6780a-5p 0 1 0
chr6:33287127|33287395 hsa-miR-6879-5p 0 1 0
chr6:33287127|33287395 hsa-miR-642b-3p 0 1 0
chr6:33287127|33287395 hsa-miR-6735-5p 0 1 0
chr6:33287127|33287395 hsa-miR-4436b-3p 0 1 0
chr6:33287127|33287395 hsa-miR-1266-5p 1 0 0
chr6:33287127|33287395 hsa-miR-6775-3p 1 0 0
chr6:33287127|33287395 hsa-miR-3130-5p 0 1 0
chr6:33287127|33287395 hsa-miR-4701-5p 0 1 0
chr6:33287127|33287395 hsa-miR-642a-3p 0 1 0
chr6:33287127|33287395 hsa-miR-3136-5p 0 1 0
chr6:33287127|33287395 hsa-miR-892c-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:33287127|33287395
ORF Type ORF1
Protein Length 72
Nucleotide Length 216
Protein Sequence MELRNWLEALGMTTSPLGPQQREYRGQSGLGHSLCLSLSVRNRVSNLPGCVSGEDCGSSECSSWAARCYESE
Nucleotide Sequence ATGGAGCTCAGGAACTGGTTGGAAGCCCTTGGGATGACCACCTCTCCTTTAGGACCCCAGCAGAGGGAATACAGAGGGCAATCAGGACTGGGTCATTCTCTCTGTCTTTCTCTCTCAGTCAGAAACAGGGTTTCTAACCTACCTGGATGTGTCAGTGGGGAAGATTGTGGCAGCTCTGAATGCTCGAGCTGGGCGGCTCGATGTTATGAGTCAGAA

CircID chr6:33287127|33287395
ORF Type ORF2
Protein Length 25
Nucleotide Length 75
Protein Sequence MDVSVGKIVAALNARAGRLDVMSQN
Nucleotide Sequence CTGGATGTGTCAGTGGGGAAGATTGTGGCAGCTCTGAATGCTCGAGCTGGGCGGCTCGATGTTATGAGTCAGAAC

CircID chr6:33287127|33287395
ORF Type ORF3
Protein Length 58
Nucleotide Length 177
Protein Sequence MPFHFLLATAVSGHGAQELVGSPWDDHLSFRTPAEGIQRAIRTGSFSLSFSLSQKQGF
Nucleotide Sequence CTGCCCTTCCACTTCCTCCTGGCTACAGCTGTGAGTGGCCATGGAGCTCAGGAACTGGTTGGAAGCCCTTGGGATGACCACCTCTCCTTTAGGACCCCAGCAGAGGGAATACAGAGGGCAATCAGGACTGGGTCATTCTCTCTGTCTTTCTCTCTCAGTCAGAAACAGGGTTTCTAA

CircID chr6:33287127|33287395
ORF Type ORF4
Protein Length 26
Nucleotide Length 81
Protein Sequence MPQSSPLTHPGRLETLFLTERERQRE
Nucleotide Sequence CTGCCACAATCTTCCCCACTGACACATCCAGGTAGGTTAGAAACCCTGTTTCTGACTGAGAGAGAAAGACAGAGAGAATGA

CircID chr6:33287127|33287395
ORF Type ORF5
Protein Length 41
Nucleotide Length 123
Protein Sequence MYSLCWGPKGEVVIPRASNQFLSSMATHSCSQEEVEGQELK
Nucleotide Sequence CTGTATTCCCTCTGCTGGGGTCCTAAAGGAGAGGTGGTCATCCCAAGGGCTTCCAACCAGTTCCTGAGCTCCATGGCCACTCACAGCTGTAGCCAGGAGGAAGTGGAAGGGCAGGAACTCAAG

CircID chr6:33287127|33287395
ORF Type ORF6
Protein Length 36
Nucleotide Length 111
Protein Sequence MREKDRENDPVLIALCIPSAGVLKERWSSQGLPTSS
Nucleotide Sequence CTGAGAGAGAAAGACAGAGAGAATGACCCAGTCCTGATTGCCCTCTGTATTCCCTCTGCTGGGGTCCTAAAGGAGAGGTGGTCATCCCAAGGGCTTCCAACCAGTTCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites