CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33288650|33288860
Strand -
CircType exon
Host Gene ENSG00000227057.6;
Algorism CIRI2;
Sequence CACTTCCACAGGGACGGGGGCGGGGCCTGGGAATGGATCTTGGGTCTAGGGGAAAGGAGGACGCAATTAGCAGACAGCCTTGGATTGACCCCAACCCTCTCACTCTCAAGGAACGAGGCGGCCTGCCTCGCCACCCATCAGGTCCCACGCTCACCCCGGACAAGCCGCGCTGGGACTCCGGGTTCTTCCATTCTCGGGGTTTCTTCGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33288650|33288860 hsa-miR-346 0 0 1
chr6:33288650|33288860 hsa-miR-492 0 0 1
chr6:33288650|33288860 hsa-miR-626 0 0 1
chr6:33288650|33288860 hsa-miR-632 0 1 1
chr6:33288650|33288860 hsa-miR-940 0 1 1
chr6:33288650|33288860 hsa-miR-1293 0 0 1
chr6:33288650|33288860 hsa-miR-1247-5p 0 0 1
chr6:33288650|33288860 hsa-miR-1247-3p 0 0 1
chr6:33288650|33288860 hsa-miR-302f 0 0 1
chr6:33288650|33288860 hsa-miR-1827 0 0 1
chr6:33288650|33288860 hsa-miR-615-5p 0 0 1
chr6:33288650|33288860 hsa-miR-296-3p 0 1 1
chr6:33288650|33288860 hsa-miR-339-5p 0 0 1
chr6:33288650|33288860 hsa-miR-1289 0 0 1
chr6:33288650|33288860 hsa-miR-502-5p 0 0 1
chr6:33288650|33288860 hsa-miR-548b-3p 0 0 1
chr6:33288650|33288860 hsa-miR-1274a 0 0 1
chr6:33288650|33288860 hsa-miR-1274b 0 0 1
chr6:33288650|33288860 hsa-miR-7 0 0 1
chr6:33288650|33288860 hsa-miR-484 1 1 0
chr6:33288650|33288860 hsa-miR-608 1 0 0
chr6:33288650|33288860 hsa-miR-663a 1 0 0
chr6:33288650|33288860 hsa-miR-943 1 0 0
chr6:33288650|33288860 hsa-miR-1268a 1 0 0
chr6:33288650|33288860 hsa-miR-1913 1 0 0
chr6:33288650|33288860 hsa-miR-4258 1 0 0
chr6:33288650|33288860 hsa-miR-3649 0 1 0
chr6:33288650|33288860 hsa-miR-1268b 1 0 0
chr6:33288650|33288860 hsa-miR-4440 1 0 0
chr6:33288650|33288860 hsa-miR-4449 1 0 0
chr6:33288650|33288860 hsa-miR-4479 1 1 0
chr6:33288650|33288860 hsa-miR-4634 1 0 0
chr6:33288650|33288860 hsa-miR-4648 0 1 0
chr6:33288650|33288860 hsa-miR-4651 1 1 0
chr6:33288650|33288860 hsa-miR-4654 1 0 0
chr6:33288650|33288860 hsa-miR-4656 1 0 0
chr6:33288650|33288860 hsa-miR-4658 1 1 0
chr6:33288650|33288860 hsa-miR-5572 1 0 0
chr6:33288650|33288860 hsa-miR-6090 1 0 0
chr6:33288650|33288860 hsa-miR-7974 1 0 0
chr6:33288650|33288860 hsa-miR-9899 1 0 0
chr6:33288650|33288860 hsa-miR-92a-1-5p 0 1 0
chr6:33288650|33288860 hsa-miR-6747-5p 1 0 0
chr6:33288650|33288860 hsa-miR-1236-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6089 1 0 0
chr6:33288650|33288860 hsa-miR-296-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6741-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6727-5p 1 0 0
chr6:33288650|33288860 hsa-miR-8069 1 0 0
chr6:33288650|33288860 hsa-miR-3189-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6782-5p 1 1 0
chr6:33288650|33288860 hsa-miR-6853-5p 0 1 0
chr6:33288650|33288860 hsa-miR-6763-3p 1 0 0
chr6:33288650|33288860 hsa-miR-7108-3p 0 1 0
chr6:33288650|33288860 hsa-miR-5010-3p 1 0 0
chr6:33288650|33288860 hsa-miR-149-3p 1 0 0
chr6:33288650|33288860 hsa-miR-3162-5p 1 0 0
chr6:33288650|33288860 hsa-miR-146b-3p 0 1 0
chr6:33288650|33288860 hsa-miR-3189-3p 0 1 0
chr6:33288650|33288860 hsa-miR-4707-5p 1 0 0
chr6:33288650|33288860 hsa-miR-3180-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6752-3p 1 0 0
chr6:33288650|33288860 hsa-miR-3940-3p 1 1 0
chr6:33288650|33288860 hsa-miR-2277-5p 1 0 0
chr6:33288650|33288860 hsa-miR-331-3p 1 0 0
chr6:33288650|33288860 hsa-miR-449c-3p 1 1 0
chr6:33288650|33288860 hsa-miR-4433a-5p 1 0 0
chr6:33288650|33288860 hsa-miR-579-5p 0 1 0
chr6:33288650|33288860 hsa-miR-4738-5p 0 1 0
chr6:33288650|33288860 hsa-miR-1233-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6769b-5p 1 1 0
chr6:33288650|33288860 hsa-miR-6778-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6812-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6816-5p 1 0 0
chr6:33288650|33288860 hsa-miR-1343-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6756-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6803-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6819-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6751-5p 1 0 0
chr6:33288650|33288860 hsa-miR-10396a-5p 1 0 0
chr6:33288650|33288860 hsa-miR-10396b-5p 1 0 0
chr6:33288650|33288860 hsa-miR-4649-5p 1 0 0
chr6:33288650|33288860 hsa-miR-4758-5p 1 0 0
chr6:33288650|33288860 hsa-miR-10398-3p 1 0 0
chr6:33288650|33288860 hsa-miR-6785-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6790-5p 1 1 0
chr6:33288650|33288860 hsa-miR-6775-3p 1 1 0
chr6:33288650|33288860 hsa-miR-10392-3p 1 1 0
chr6:33288650|33288860 hsa-miR-323b-5p 1 0 0
chr6:33288650|33288860 hsa-miR-6876-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:33288650|33288860
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence MGLGERRTQLADSLGLTPTLSLSRNEAACLATHQVPRSPRTSRAGTPGSSILGVSSG
Nucleotide Sequence TTGGGTCTAGGGGAAAGGAGGACGCAATTAGCAGACAGCCTTGGATTGACCCCAACCCTCTCACTCTCAAGGAACGAGGCGGCCTGCCTCGCCACCCATCAGGTCCCACGCTCACCCCGGACAAGCCGCGCTGGGACTCCGGGTTCTTCCATTCTCGGGGTTTCTTCGGGA

CircID chr6:33288650|33288860
ORF Type ORF2
Protein Length 61
Nucleotide Length 183
Protein Sequence MGMDLGSRGKEDAISRQPWIDPNPLTLKERGGLPRHPSGPTLTPDKPRWDSGFFHSRGFFG
Nucleotide Sequence CTGGGAATGGATCTTGGGTCTAGGGGAAAGGAGGACGCAATTAGCAGACAGCCTTGGATTGACCCCAACCCTCTCACTCTCAAGGAACGAGGCGGCCTGCCTCGCCACCCATCAGGTCCCACGCTCACCCCGGACAAGCCGCGCTGGGACTCCGGGTTCTTCCATTCTCGGGGTTTCTTCGGG

CircID chr6:33288650|33288860
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MSGVSVGPDGWRGRPPRSLRVRGLGSIQGCLLIASSFPLDPRSIPRPRPRPCGS
Nucleotide Sequence TTGTCCGGGGTGAGCGTGGGACCTGATGGGTGGCGAGGCAGGCCGCCTCGTTCCTTGAGAGTGAGAGGGTTGGGGTCAATCCAAGGCTGTCTGCTAATTGCGTCCTCCTTTCCCCTAGACCCAAGATCCATTCCCAGGCCCCGCCCCCGTCCCTGTGGAAGT

CircID chr6:33288650|33288860
ORF Type ORF4
Protein Length 25
Nucleotide Length 75
Protein Sequence MSANCVLLSPRPKIHSQAPPPSLWK
Nucleotide Sequence CTGTCTGCTAATTGCGTCCTCCTTTCCCCTAGACCCAAGATCCATTCCCAGGCCCCGCCCCCGTCCCTGTGGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites