CircRNA Information

General Information
circRNA Basic Information
CircID chr6:33293834|33294066
Strand -
CircType exon
Host Gene ENSG00000237441.8;
Algorism CIRI2;
Sequence CTCTGGATATCATGGTCAGGTTGGAGGTTATAGCCACGACATTCATTCTGGAGCCGTCGCAACTCAGAAAGGACTGCAAACTCCTGGGAAGGAGCCCTCAAACTGCAGGAGCCAAAACTCAGGGACCCCTGACTTTTCCCCCTCCCCTTCCTGGAACATGGATAGGGAAGTCCAGCATCCAGCCCAGACACTCCGCTCACCTTCCTCCGCTTGTCAAAATTGATGTATCCATT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:33293834|33294066 hsa-miR-122-5p 0 0 1
chr6:33293834|33294066 hsa-miR-122-3p 0 0 1
chr6:33293834|33294066 hsa-miR-422a 0 0 1
chr6:33293834|33294066 hsa-miR-571 0 0 1
chr6:33293834|33294066 hsa-miR-591 0 0 1
chr6:33293834|33294066 hsa-miR-612 0 0 1
chr6:33293834|33294066 hsa-miR-617 0 0 1
chr6:33293834|33294066 hsa-miR-625-5p 0 0 1
chr6:33293834|33294066 hsa-miR-625-3p 0 0 1
chr6:33293834|33294066 hsa-miR-658 1 1 1
chr6:33293834|33294066 hsa-miR-665 0 1 1
chr6:33293834|33294066 hsa-miR-1231 1 1 1
chr6:33293834|33294066 hsa-miR-1204 0 0 1
chr6:33293834|33294066 hsa-miR-1287-5p 0 0 1
chr6:33293834|33294066 hsa-miR-1287-3p 0 0 1
chr6:33293834|33294066 hsa-miR-1304-5p 0 0 1
chr6:33293834|33294066 hsa-miR-1304-3p 0 0 1
chr6:33293834|33294066 hsa-miR-615-5p 0 1 1
chr6:33293834|33294066 hsa-miR-525-5p 0 0 1
chr6:33293834|33294066 hsa-miR-520a-5p 0 0 1
chr6:33293834|33294066 hsa-miR-125a-5p 0 0 1
chr6:33293834|33294066 hsa-miR-125b 0 0 1
chr6:33293834|33294066 hsa-miR-378 0 0 1
chr6:33293834|33294066 hsa-miR-1285 0 0 1
chr6:33293834|33294066 hsa-miR-514 0 0 1
chr6:33293834|33294066 hsa-miR-219-1-3p 0 0 1
chr6:33293834|33294066 hsa-miR-499-3p 0 0 1
chr6:33293834|33294066 hsa-miR-762 0 1 0
chr6:33293834|33294066 hsa-miR-3125 1 0 0
chr6:33293834|33294066 hsa-miR-3185 1 0 0
chr6:33293834|33294066 hsa-miR-4271 1 0 0
chr6:33293834|33294066 hsa-miR-3916 1 0 0
chr6:33293834|33294066 hsa-miR-378g 0 1 0
chr6:33293834|33294066 hsa-miR-4448 0 1 0
chr6:33293834|33294066 hsa-miR-4467 1 0 0
chr6:33293834|33294066 hsa-miR-4507 1 1 0
chr6:33293834|33294066 hsa-miR-4516 1 0 0
chr6:33293834|33294066 hsa-miR-4525 1 0 0
chr6:33293834|33294066 hsa-miR-4533 1 0 0
chr6:33293834|33294066 hsa-miR-1587 1 1 0
chr6:33293834|33294066 hsa-miR-4537 1 0 0
chr6:33293834|33294066 hsa-miR-4651 1 0 0
chr6:33293834|33294066 hsa-miR-4656 1 0 0
chr6:33293834|33294066 hsa-miR-4682 0 1 0
chr6:33293834|33294066 hsa-miR-4706 1 0 0
chr6:33293834|33294066 hsa-miR-4721 1 1 0
chr6:33293834|33294066 hsa-miR-4730 1 0 0
chr6:33293834|33294066 hsa-miR-4739 1 1 0
chr6:33293834|33294066 hsa-miR-4741 1 0 0
chr6:33293834|33294066 hsa-miR-6124 0 1 0
chr6:33293834|33294066 hsa-miR-6127 1 0 0
chr6:33293834|33294066 hsa-miR-6129 1 0 0
chr6:33293834|33294066 hsa-miR-6133 1 0 0
chr6:33293834|33294066 hsa-miR-8056 1 0 0
chr6:33293834|33294066 hsa-miR-8058 0 1 0
chr6:33293834|33294066 hsa-miR-8077 1 0 0
chr6:33293834|33294066 hsa-miR-12115 1 0 0
chr6:33293834|33294066 hsa-miR-17-3p 0 1 0
chr6:33293834|33294066 hsa-miR-6734-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6840-3p 0 1 0
chr6:33293834|33294066 hsa-miR-504-3p 1 0 0
chr6:33293834|33294066 hsa-miR-6765-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6861-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6825-5p 1 1 0
chr6:33293834|33294066 hsa-miR-6894-5p 1 0 0
chr6:33293834|33294066 hsa-miR-219a-1-3p 1 0 0
chr6:33293834|33294066 hsa-miR-25-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6799-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6510-5p 1 0 0
chr6:33293834|33294066 hsa-miR-766-5p 1 0 0
chr6:33293834|33294066 hsa-miR-7847-3p 1 0 0
chr6:33293834|33294066 hsa-miR-6746-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6730-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6762-3p 1 0 0
chr6:33293834|33294066 hsa-miR-3180-3p 1 0 0
chr6:33293834|33294066 hsa-miR-6798-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6881-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6782-5p 1 1 0
chr6:33293834|33294066 hsa-miR-30b-3p 1 0 0
chr6:33293834|33294066 hsa-miR-1226-5p 1 1 0
chr6:33293834|33294066 hsa-miR-1228-5p 1 0 0
chr6:33293834|33294066 hsa-miR-296-3p 1 0 0
chr6:33293834|33294066 hsa-miR-149-3p 1 0 0
chr6:33293834|33294066 hsa-miR-6824-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6802-5p 1 0 0
chr6:33293834|33294066 hsa-miR-5010-5p 1 0 0
chr6:33293834|33294066 hsa-miR-7846-3p 1 1 0
chr6:33293834|33294066 hsa-miR-1225-5p 1 0 0
chr6:33293834|33294066 hsa-miR-3158-3p 0 1 0
chr6:33293834|33294066 hsa-miR-6883-3p 0 1 0
chr6:33293834|33294066 hsa-miR-670-5p 0 1 0
chr6:33293834|33294066 hsa-miR-6733-3p 1 0 0
chr6:33293834|33294066 hsa-miR-10400-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6769b-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6816-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6870-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6893-5p 1 0 0
chr6:33293834|33294066 hsa-miR-1343-5p 1 0 0
chr6:33293834|33294066 hsa-miR-3180 1 0 0
chr6:33293834|33294066 hsa-miR-6752-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6754-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6756-5p 1 0 0
chr6:33293834|33294066 hsa-miR-11181-3p 1 0 0
chr6:33293834|33294066 hsa-miR-1249-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6779-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6797-5p 1 0 0
chr6:33293834|33294066 hsa-miR-7111-5p 1 0 0
chr6:33293834|33294066 hsa-miR-3620-5p 1 1 0
chr6:33293834|33294066 hsa-miR-4728-5p 0 1 0
chr6:33293834|33294066 hsa-miR-5196-5p 1 1 0
chr6:33293834|33294066 hsa-miR-6780b-5p 1 0 0
chr6:33293834|33294066 hsa-miR-328-5p 1 0 0
chr6:33293834|33294066 hsa-miR-4649-5p 1 0 0
chr6:33293834|33294066 hsa-miR-4725-3p 1 1 0
chr6:33293834|33294066 hsa-miR-6738-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6777-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6858-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6889-5p 1 0 0
chr6:33293834|33294066 hsa-miR-939-5p 1 0 0
chr6:33293834|33294066 hsa-miR-4758-5p 1 0 0
chr6:33293834|33294066 hsa-miR-3940-5p 1 1 0
chr6:33293834|33294066 hsa-miR-1914-3p 1 0 0
chr6:33293834|33294066 hsa-miR-6736-5p 1 0 0
chr6:33293834|33294066 hsa-miR-6876-5p 0 1 0
chr6:33293834|33294066 hsa-miR-4716-3p 1 1 0
chr6:33293834|33294066 hsa-miR-541-3p 1 0 0
chr6:33293834|33294066 hsa-miR-6785-5p 0 1 0
chr6:33293834|33294066 hsa-miR-6502-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:33293834|33294066
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MQTPGKEPSNCRSQNSGTPDFSPSPSWNMDREVQHPAQTLRSPSSACQN
Nucleotide Sequence CTGCAAACTCCTGGGAAGGAGCCCTCAAACTGCAGGAGCCAAAACTCAGGGACCCCTGACTTTTCCCCCTCCCCTTCCTGGAACATGGATAGGGAAGTCCAGCATCCAGCCCAGACACTCCGCTCACCTTCCTCCGCTTGTCAAAATTGA

CircID chr6:33293834|33294066
ORF Type ORF2
Protein Length 77
Nucleotide Length 231
Protein Sequence LDIMVRLEVIATTFILEPSQLRKDCKLLGRSPQTAGAKTQGPLTFPPPLPGTWIGKSSIQPRHSAHLPPLVKIDVSI
Nucleotide Sequence CTGGATATCATGGTCAGGTTGGAGGTTATAGCCACGACATTCATTCTGGAGCCGTCGCAACTCAGAAAGGACTGCAAACTCCTGGGAAGGAGCCCTCAAACTGCAGGAGCCAAAACTCAGGGACCCCTGACTTTTCCCCCTCCCCTTCCTGGAACATGGATAGGGAAGTCCAGCATCCAGCCCAGACACTCCGCTCACCTTCCTCCGCTTGTCAAAATTGATGTATCCATT

CircID chr6:33293834|33294066
ORF Type ORF3
Protein Length 60
Nucleotide Length 180
Protein Sequence MDAGLPYPCSRKGRGKSQGSLSFGSCSLRAPSQEFAVLSELRRLQNECRGYNLQPDHDIQ
Nucleotide Sequence CTGGATGCTGGACTTCCCTATCCATGTTCCAGGAAGGGGAGGGGGAAAAGTCAGGGGTCCCTGAGTTTTGGCTCCTGCAGTTTGAGGGCTCCTTCCCAGGAGTTTGCAGTCCTTTCTGAGTTGCGACGGCTCCAGAATGAATGTCGTGGCTATAACCTCCAACCTGACCATGATATCCAG

CircID chr6:33293834|33294066
ORF Type ORF4
Protein Length 26
Nucleotide Length 78
Protein Sequence MQSFLSCDGSRMNVVAITSNLTMISR
Nucleotide Sequence TTGCAGTCCTTTCTGAGTTGCGACGGCTCCAGAATGAATGTCGTGGCTATAACCTCCAACCTGACCATGATATCCAGA

CircID chr6:33293834|33294066
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MFQEGEGEKSGVPEFWLLQFEGSFPGVCSPF
Nucleotide Sequence ATGTTCCAGGAAGGGGAGGGGGAAAAGTCAGGGGTCCCTGAGTTTTGGCTCCTGCAGTTTGAGGGCTCCTTCCCAGGAGTTTGCAGTCCTTTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites