CircNet

General Information

circRNA Basic Information

CircID	chr6:35027421\|35027612
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	ATCAGGGTAGAGGGAGCTTCTTAGAGACCAGATATGAAGGTGGTCTGTGTGTATGCATGCACGCATGTGTGTGTATATATCCCAGAGAAGTTTAATTTGTTTAGAGATATGCTGTGTGGTCAGAGTGGCAGCCAGATGGTGGGGGATAGGCTTTTTATTATGTAAGACTCTGAGAAAACAATTAATCTGGAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:35027421\|35027612	hsa-miR-198	0	0	1
chr6:35027421\|35027612	hsa-miR-10a-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-10a-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-10b-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-10b-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-205-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-205-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-149-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-149-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-326	0	0	1
chr6:35027421\|35027612	hsa-miR-517-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-517b-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-600	0	0	1
chr6:35027421\|35027612	hsa-miR-603	0	0	1
chr6:35027421\|35027612	hsa-miR-604	0	0	1
chr6:35027421\|35027612	hsa-miR-647	0	1	1
chr6:35027421\|35027612	hsa-miR-924	0	0	1
chr6:35027421\|35027612	hsa-miR-942-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-942-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-361-3p	1	0	1
chr6:35027421\|35027612	hsa-miR-330-5p	0	0	1
chr6:35027421\|35027612	hsa-miR-362-3p	0	0	1
chr6:35027421\|35027612	hsa-miR-642	0	0	1
chr6:35027421\|35027612	hsa-miR-329	0	0	1
chr6:35027421\|35027612	hsa-miR-1913	1	0	0
chr6:35027421\|35027612	hsa-miR-1260b	1	0	0
chr6:35027421\|35027612	hsa-miR-3943	1	0	0
chr6:35027421\|35027612	hsa-miR-4469	0	1	0
chr6:35027421\|35027612	hsa-miR-214-5p	1	0	0
chr6:35027421\|35027612	hsa-miR-3663-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-4713-5p	1	1	0
chr6:35027421\|35027612	hsa-miR-6763-3p	1	0	0
chr6:35027421\|35027612	hsa-miR-6736-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-339-5p	1	0	0
chr6:35027421\|35027612	hsa-miR-7106-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-4758-3p	1	0	0
chr6:35027421\|35027612	hsa-miR-6513-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-1914-5p	1	0	0
chr6:35027421\|35027612	hsa-miR-3675-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-3126-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-5002-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-4714-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-6731-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-4789-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-3085-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-619-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-6806-3p	0	1	0
chr6:35027421\|35027612	hsa-miR-6506-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-301a-5p	0	1	0
chr6:35027421\|35027612	hsa-miR-1277-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:35027421\|35027612
ORF Type	ORF1
Protein Length	43
Nucleotide Length	132
Protein Sequence	MKVVCVYACTHVCVYIPEKFNLFRDMLCGQSGSQMVGDRLFIM
Nucleotide Sequence	ATGAAGGTGGTCTGTGTGTATGCATGCACGCATGTGTGTGTATATATCCCAGAGAAGTTTAATTTGTTTAGAGATATGCTGTGTGGTCAGAGTGGCAGCCAGATGGTGGGGGATAGGCTTTTTATTATGTAA

CircID	chr6:35027421\|35027612
ORF Type	ORF2
Protein Length	46
Nucleotide Length	138
Protein Sequence	MHARMCVYISQRSLICLEICCVVRVAARWWGIGFLLCKTLRKQLIW
Nucleotide Sequence	ATGCATGCACGCATGTGTGTGTATATATCCCAGAGAAGTTTAATTTGTTTAGAGATATGCTGTGTGGTCAGAGTGGCAGCCAGATGGTGGGGGATAGGCTTTTTATTATGTAAGACTCTGAGAAAACAATTAATCTGG

CircID	chr6:35027421\|35027612
ORF Type	ORF3
Protein Length	45
Nucleotide Length	135
Protein Sequence	MAATLTTQHISKQIKLLWDIYTHMRACIHTDHLHIWSLRSSLYPD
Nucleotide Sequence	CTGGCTGCCACTCTGACCACACAGCATATCTCTAAACAAATTAAACTTCTCTGGGATATATACACACACATGCGTGCATGCATACACACAGACCACCTTCATATCTGGTCTCTAAGAAGCTCCCTCTACCCTGAT

CircID	chr6:35027421\|35027612
ORF Type	ORF4
Protein Length	27
Nucleotide Length	84
Protein Sequence	MGYIHTHACMHTHRPPSYLVSKKLPLP
Nucleotide Sequence	CTGGGATATATACACACACATGCGTGCATGCATACACACAGACCACCTTCATATCTGGTCTCTAAGAAGCTCCCTCTACCCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information