CircRNA Information

General Information
circRNA Basic Information
CircID chr6:36109432|36109576
Strand +
CircType exon
Host Gene ENSG00000112062.9;
Algorism CIRI2;
Sequence CTGAAGTATCAATTGTGTTCAACACAGAATAGCACTAGGGGCTGAAGAGAGGTGATATCACTTGCCATAATATCAGCTGAGGTGACATGGGATCTAAACTACCCAAGAAGTCTTCACTGGCAAACCTGCCTGACACCAGGGCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:36109432|36109576 hsa-miR-31-5p 0 0 1
chr6:36109432|36109576 hsa-miR-31-3p 0 0 1
chr6:36109432|36109576 hsa-miR-183-5p 0 0 1
chr6:36109432|36109576 hsa-miR-183-3p 0 0 1
chr6:36109432|36109576 hsa-miR-520f-5p 0 0 1
chr6:36109432|36109576 hsa-miR-520f-3p 0 0 1
chr6:36109432|36109576 hsa-miR-635 0 0 1
chr6:36109432|36109576 hsa-miR-653-5p 0 0 1
chr6:36109432|36109576 hsa-miR-653-3p 0 0 1
chr6:36109432|36109576 hsa-miR-656-5p 0 0 1
chr6:36109432|36109576 hsa-miR-656-3p 0 0 1
chr6:36109432|36109576 hsa-miR-657 0 0 1
chr6:36109432|36109576 hsa-miR-940 0 0 1
chr6:36109432|36109576 hsa-miR-1236-5p 0 0 1
chr6:36109432|36109576 hsa-miR-1236-3p 0 0 1
chr6:36109432|36109576 hsa-miR-1202 0 0 1
chr6:36109432|36109576 hsa-miR-1291 0 0 1
chr6:36109432|36109576 hsa-miR-512-3p 0 0 1
chr6:36109432|36109576 hsa-miR-1225-5p 0 0 1
chr6:36109432|36109576 hsa-miR-1207-3p 0 0 1
chr6:36109432|36109576 hsa-miR-760 1 0 0
chr6:36109432|36109576 hsa-miR-2861 1 0 0
chr6:36109432|36109576 hsa-miR-3183 0 1 0
chr6:36109432|36109576 hsa-miR-3689e 0 1 0
chr6:36109432|36109576 hsa-miR-4514 0 1 0
chr6:36109432|36109576 hsa-miR-4736 0 1 0
chr6:36109432|36109576 hsa-miR-4748 0 1 0
chr6:36109432|36109576 hsa-miR-8075 1 0 0
chr6:36109432|36109576 hsa-miR-8087 0 1 0
chr6:36109432|36109576 hsa-miR-6765-5p 1 0 0
chr6:36109432|36109576 hsa-miR-5008-5p 0 1 0
chr6:36109432|36109576 hsa-miR-1207-5p 1 0 0
chr6:36109432|36109576 hsa-miR-4763-3p 1 0 0
chr6:36109432|36109576 hsa-miR-6893-5p 0 1 0
chr6:36109432|36109576 hsa-miR-6774-5p 1 0 0
chr6:36109432|36109576 hsa-miR-3059-5p 1 0 0
chr6:36109432|36109576 hsa-miR-4723-3p 0 1 0
chr6:36109432|36109576 hsa-miR-3689a-5p 0 1 0
chr6:36109432|36109576 hsa-miR-3689b-5p 0 1 0
chr6:36109432|36109576 hsa-miR-130a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:36109432|36109576
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MVSGRFASEDFLGSLDPMSPQLILWQVISPLFSP
Nucleotide Sequence CTGGTGTCAGGCAGGTTTGCCAGTGAAGACTTCTTGGGTAGTTTAGATCCCATGTCACCTCAGCTGATATTATGGCAAGTGATATCACCTCTCTTCAGCCCCTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites