CircRNA Information

General Information
circRNA Basic Information
CircID chr6:36968393|36968555
Strand +
CircType exon
Host Gene ENSG00000137409.17;
Algorism CIRI2;
Sequence CCCACCCCGTCTACCCCTCCAGTCAGCCCAGCGCCCATCCTGCAGCTCAGCTGGGAGCATCATTCTCCTGCTTTGTACATAGGGTGTGGTCCCCTGGCACGTGGCCACCATCATGTCTAGGCCTATGCTAGGAGGCAAATGGCCAGGCTCTGCCTGTGTTTTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:36968393|36968555 hsa-miR-379-5p 0 0 1
chr6:36968393|36968555 hsa-miR-379-3p 0 0 1
chr6:36968393|36968555 hsa-miR-558 0 0 1
chr6:36968393|36968555 hsa-miR-588 0 0 1
chr6:36968393|36968555 hsa-miR-608 0 0 1
chr6:36968393|36968555 hsa-miR-1205 0 1 1
chr6:36968393|36968555 hsa-miR-1286 0 0 1
chr6:36968393|36968555 hsa-miR-1322 0 1 1
chr6:36968393|36968555 hsa-miR-330-3p 0 0 1
chr6:36968393|36968555 hsa-miR-483-5p 0 0 1
chr6:36968393|36968555 hsa-miR-524-5p 0 0 1
chr6:36968393|36968555 hsa-miR-520d-5p 0 0 1
chr6:36968393|36968555 hsa-miR-762 1 0 0
chr6:36968393|36968555 hsa-miR-760 1 0 0
chr6:36968393|36968555 hsa-miR-1183 1 0 0
chr6:36968393|36968555 hsa-miR-1268a 1 0 0
chr6:36968393|36968555 hsa-miR-3147 1 0 0
chr6:36968393|36968555 hsa-miR-3652 1 0 0
chr6:36968393|36968555 hsa-miR-3907 0 1 0
chr6:36968393|36968555 hsa-miR-1268b 1 0 0
chr6:36968393|36968555 hsa-miR-4487 1 0 0
chr6:36968393|36968555 hsa-miR-4492 1 0 0
chr6:36968393|36968555 hsa-miR-4498 1 0 0
chr6:36968393|36968555 hsa-miR-4505 1 0 0
chr6:36968393|36968555 hsa-miR-2392 1 1 0
chr6:36968393|36968555 hsa-miR-4507 1 0 0
chr6:36968393|36968555 hsa-miR-1587 1 1 0
chr6:36968393|36968555 hsa-miR-4651 0 1 0
chr6:36968393|36968555 hsa-miR-4656 1 1 0
chr6:36968393|36968555 hsa-miR-4663 1 1 0
chr6:36968393|36968555 hsa-miR-4692 0 1 0
chr6:36968393|36968555 hsa-miR-4734 1 0 0
chr6:36968393|36968555 hsa-miR-4741 1 1 0
chr6:36968393|36968555 hsa-miR-5192 0 1 0
chr6:36968393|36968555 hsa-miR-6165 0 1 0
chr6:36968393|36968555 hsa-miR-8077 1 0 0
chr6:36968393|36968555 hsa-miR-134-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6894-5p 1 1 0
chr6:36968393|36968555 hsa-miR-8071 1 0 0
chr6:36968393|36968555 hsa-miR-6515-5p 0 1 0
chr6:36968393|36968555 hsa-miR-4722-5p 1 1 0
chr6:36968393|36968555 hsa-miR-6741-5p 1 0 0
chr6:36968393|36968555 hsa-miR-197-5p 0 1 0
chr6:36968393|36968555 hsa-miR-8069 1 0 0
chr6:36968393|36968555 hsa-miR-6768-5p 0 1 0
chr6:36968393|36968555 hsa-miR-6829-5p 1 0 0
chr6:36968393|36968555 hsa-miR-619-3p 0 1 0
chr6:36968393|36968555 hsa-miR-4690-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6823-5p 1 0 0
chr6:36968393|36968555 hsa-miR-3190-5p 0 1 0
chr6:36968393|36968555 hsa-miR-455-5p 0 1 0
chr6:36968393|36968555 hsa-miR-6812-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6726-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6756-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6851-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6779-5p 1 0 0
chr6:36968393|36968555 hsa-miR-3620-5p 1 1 0
chr6:36968393|36968555 hsa-miR-5189-5p 1 0 0
chr6:36968393|36968555 hsa-miR-5196-5p 1 0 0
chr6:36968393|36968555 hsa-miR-1909-3p 1 0 0
chr6:36968393|36968555 hsa-miR-6738-5p 0 1 0
chr6:36968393|36968555 hsa-miR-6846-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6848-5p 1 0 0
chr6:36968393|36968555 hsa-miR-10394-3p 1 0 0
chr6:36968393|36968555 hsa-miR-6511b-5p 1 0 0
chr6:36968393|36968555 hsa-miR-7843-5p 1 0 0
chr6:36968393|36968555 hsa-miR-6766-5p 0 1 0
chr6:36968393|36968555 hsa-miR-6785-5p 1 0 0
chr6:36968393|36968555 hsa-miR-3529-5p 0 1 0
chr6:36968393|36968555 hsa-miR-6829-3p 0 1 0
chr6:36968393|36968555 hsa-miR-10400-3p 1 0 0
chr6:36968393|36968555 hsa-miR-664b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:36968393|36968555
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MQLSWEHHSPALYIGCGPLARGHHHV
Nucleotide Sequence CTGCAGCTCAGCTGGGAGCATCATTCTCCTGCTTTGTACATAGGGTGTGGTCCCCTGGCACGTGGCCACCATCATGTCTAG
CircID chr6:36968393|36968555
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MGASFSCFVHRVWSPGTWPPSCLGLC
Nucleotide Sequence CTGGGAGCATCATTCTCCTGCTTTGTACATAGGGTGTGGTCCCCTGGCACGTGGCCACCATCATGTCTAGGCCTATGCTAG
CircID chr6:36968393|36968555
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence MPPSIGLDMMVATCQGTTPYVQSRRMMLPAELQDGRWADWRGRRGG
Nucleotide Sequence TTGCCTCCTAGCATAGGCCTAGACATGATGGTGGCCACGTGCCAGGGGACCACACCCTATGTACAAAGCAGGAGAATGATGCTCCCAGCTGAGCTGCAGGATGGGCGCTGGGCTGACTGGAGGGGTAGACGGGGTGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab