CircRNA Information

General Information
circRNA Basic Information
CircID chr6:39188745|39188873
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTACTGCAATGTTCCTCCCGCGTCCTTACCTCCCCACAGAGGCCTGCCTCTCCCCGCTCTCTTCATCTCTTTTCATTCTTTTCTCCCCTCCAGACCATCCAATCCTCTTATCAGTCTGTCCTGAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:39188745|39188873 hsa-miR-143-5p 0 0 1
chr6:39188745|39188873 hsa-miR-143-3p 0 0 1
chr6:39188745|39188873 hsa-miR-186-5p 0 0 1
chr6:39188745|39188873 hsa-miR-186-3p 0 0 1
chr6:39188745|39188873 hsa-miR-510-5p 0 0 1
chr6:39188745|39188873 hsa-miR-510-3p 0 0 1
chr6:39188745|39188873 hsa-miR-936 0 0 1
chr6:39188745|39188873 hsa-miR-939-5p 0 0 1
chr6:39188745|39188873 hsa-miR-939-3p 0 0 1
chr6:39188745|39188873 hsa-miR-940 0 0 1
chr6:39188745|39188873 hsa-miR-1827 0 0 1
chr6:39188745|39188873 hsa-miR-491-5p 0 0 1
chr6:39188745|39188873 hsa-miR-516b 0 0 1
chr6:39188745|39188873 hsa-miR-184 1 0 0
chr6:39188745|39188873 hsa-miR-608 1 0 0
chr6:39188745|39188873 hsa-miR-650 1 0 0
chr6:39188745|39188873 hsa-miR-663a 1 0 0
chr6:39188745|39188873 hsa-miR-658 1 0 0
chr6:39188745|39188873 hsa-miR-765 1 0 0
chr6:39188745|39188873 hsa-miR-1293 1 1 0
chr6:39188745|39188873 hsa-miR-1321 1 0 0
chr6:39188745|39188873 hsa-miR-2110 1 0 0
chr6:39188745|39188873 hsa-miR-3141 1 0 0
chr6:39188745|39188873 hsa-miR-3175 1 1 0
chr6:39188745|39188873 hsa-miR-3178 1 0 0
chr6:39188745|39188873 hsa-miR-3196 1 0 0
chr6:39188745|39188873 hsa-miR-4306 1 0 0
chr6:39188745|39188873 hsa-miR-4322 1 0 0
chr6:39188745|39188873 hsa-miR-4271 1 0 0
chr6:39188745|39188873 hsa-miR-3916 1 0 0
chr6:39188745|39188873 hsa-miR-4436a 1 1 0
chr6:39188745|39188873 hsa-miR-4458 1 0 0
chr6:39188745|39188873 hsa-miR-3689c 1 0 0
chr6:39188745|39188873 hsa-miR-4483 1 0 0
chr6:39188745|39188873 hsa-miR-4490 0 1 0
chr6:39188745|39188873 hsa-miR-4499 1 1 0
chr6:39188745|39188873 hsa-miR-4506 1 0 0
chr6:39188745|39188873 hsa-miR-2392 1 0 0
chr6:39188745|39188873 hsa-miR-4507 1 0 0
chr6:39188745|39188873 hsa-miR-4513 1 0 0
chr6:39188745|39188873 hsa-miR-4514 1 0 0
chr6:39188745|39188873 hsa-miR-4516 1 0 0
chr6:39188745|39188873 hsa-miR-4644 1 1 0
chr6:39188745|39188873 hsa-miR-4651 1 0 0
chr6:39188745|39188873 hsa-miR-4688 1 0 0
chr6:39188745|39188873 hsa-miR-4689 1 0 0
chr6:39188745|39188873 hsa-miR-4706 1 1 0
chr6:39188745|39188873 hsa-miR-4710 1 0 0
chr6:39188745|39188873 hsa-miR-4739 1 1 0
chr6:39188745|39188873 hsa-miR-4748 1 0 0
chr6:39188745|39188873 hsa-miR-5194 1 0 0
chr6:39188745|39188873 hsa-miR-5698 1 0 0
chr6:39188745|39188873 hsa-miR-5703 1 0 0
chr6:39188745|39188873 hsa-miR-5739 1 0 0
chr6:39188745|39188873 hsa-miR-5787 1 0 0
chr6:39188745|39188873 hsa-miR-6086 1 0 0
chr6:39188745|39188873 hsa-miR-6088 1 1 0
chr6:39188745|39188873 hsa-miR-6090 1 0 0
chr6:39188745|39188873 hsa-miR-6124 1 0 0
chr6:39188745|39188873 hsa-miR-6133 1 0 0
chr6:39188745|39188873 hsa-miR-6745 1 0 0
chr6:39188745|39188873 hsa-miR-6863 1 0 0
chr6:39188745|39188873 hsa-miR-8072 1 0 0
chr6:39188745|39188873 hsa-miR-8085 1 1 0
chr6:39188745|39188873 hsa-miR-8089 1 0 0
chr6:39188745|39188873 hsa-miR-12119 1 0 0
chr6:39188745|39188873 hsa-miR-12120 1 0 0
chr6:39188745|39188873 hsa-miR-92a-1-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6734-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6765-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3150a-3p 1 0 0
chr6:39188745|39188873 hsa-miR-7106-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6825-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6894-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6857-5p 1 0 0
chr6:39188745|39188873 hsa-miR-125a-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6799-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6728-5p 1 0 0
chr6:39188745|39188873 hsa-miR-8071 1 0 0
chr6:39188745|39188873 hsa-miR-766-5p 1 0 0
chr6:39188745|39188873 hsa-miR-139-3p 1 0 0
chr6:39188745|39188873 hsa-miR-1236-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6515-5p 0 1 0
chr6:39188745|39188873 hsa-miR-6089 1 0 0
chr6:39188745|39188873 hsa-miR-3192-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6757-5p 1 0 0
chr6:39188745|39188873 hsa-miR-7847-3p 1 0 0
chr6:39188745|39188873 hsa-miR-4695-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6746-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4653-3p 1 0 0
chr6:39188745|39188873 hsa-miR-4709-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6730-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3928-3p 0 1 0
chr6:39188745|39188873 hsa-miR-197-5p 1 0 0
chr6:39188745|39188873 hsa-miR-8069 1 0 0
chr6:39188745|39188873 hsa-miR-7845-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6742-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3151-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1292-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3180-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6748-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6805-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1224-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6760-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6881-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6782-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6810-5p 1 0 0
chr6:39188745|39188873 hsa-miR-30b-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6786-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6835-5p 1 0 0
chr6:39188745|39188873 hsa-miR-7109-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1226-5p 1 0 0
chr6:39188745|39188873 hsa-miR-185-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1229-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1908-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1228-5p 1 0 0
chr6:39188745|39188873 hsa-miR-296-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6771-5p 1 0 0
chr6:39188745|39188873 hsa-miR-92b-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6749-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3202 1 0 0
chr6:39188745|39188873 hsa-miR-149-3p 1 0 0
chr6:39188745|39188873 hsa-miR-202-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6824-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6878-5p 1 1 0
chr6:39188745|39188873 hsa-miR-516b-5p 1 1 0
chr6:39188745|39188873 hsa-miR-423-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3191-3p 1 0 0
chr6:39188745|39188873 hsa-miR-509-3p 1 0 0
chr6:39188745|39188873 hsa-miR-2277-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4650-5p 0 1 0
chr6:39188745|39188873 hsa-miR-1207-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1233-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1273h-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3689b-3p 1 0 0
chr6:39188745|39188873 hsa-miR-4763-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6778-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6787-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6812-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6816-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6870-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6893-5p 1 1 0
chr6:39188745|39188873 hsa-miR-1343-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6726-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6737-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6743-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6752-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6756-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6769a-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6803-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6819-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6851-5p 1 0 0
chr6:39188745|39188873 hsa-miR-7110-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1249-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6763-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6779-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6780a-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6788-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6797-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6808-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6879-5p 1 0 0
chr6:39188745|39188873 hsa-miR-7111-5p 1 1 0
chr6:39188745|39188873 hsa-miR-4728-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6780b-5p 1 0 0
chr6:39188745|39188873 hsa-miR-10396b-5p 1 0 0
chr6:39188745|39188873 hsa-miR-1237-5p 1 0 0
chr6:39188745|39188873 hsa-miR-328-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3689a-3p 1 0 0
chr6:39188745|39188873 hsa-miR-4632-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4649-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4725-3p 1 0 0
chr6:39188745|39188873 hsa-miR-4745-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4749-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6729-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6738-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6777-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6795-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6858-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6883-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6887-5p 1 1 0
chr6:39188745|39188873 hsa-miR-4723-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6831-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6885-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4758-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4769-5p 1 0 0
chr6:39188745|39188873 hsa-miR-10394-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6731-5p 1 1 0
chr6:39188745|39188873 hsa-miR-6758-5p 1 0 0
chr6:39188745|39188873 hsa-miR-6856-5p 1 0 0
chr6:39188745|39188873 hsa-miR-3173-3p 1 0 0
chr6:39188745|39188873 hsa-miR-3679-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4646-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4716-3p 1 0 0
chr6:39188745|39188873 hsa-miR-6785-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4667-5p 1 0 0
chr6:39188745|39188873 hsa-miR-4757-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:39188745|39188873
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MPLPALFISFHSFLPSRPSNPLISLS
Nucleotide Sequence CTGCCTCTCCCCGCTCTCTTCATCTCTTTTCATTCTTTTCTCCCCTCCAGACCATCCAATCCTCTTATCAGTCTGTCCTGA
CircID chr6:39188745|39188873
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MFLPRPYLPTEACLSPLSSSLFILFSPPDHPILLSVCPE
Nucleotide Sequence ATGTTCCTCCCGCGTCCTTACCTCCCCACAGAGGCCTGCCTCTCCCCGCTCTCTTCATCTCTTTTCATTCTTTTCTCCCCTCCAGACCATCCAATCCTCTTATCAGTCTGTCCTGAG
CircID chr6:39188745|39188873
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MQCSSRVLTSPQRPASPRSLHLFSFFSPLQTIQSSYQSVLS
Nucleotide Sequence CTGCAATGTTCCTCCCGCGTCCTTACCTCCCCACAGAGGCCTGCCTCTCCCCGCTCTCTTCATCTCTTTTCATTCTTTTCTCCCCTCCAGACCATCCAATCCTCTTATCAGTCTGTCCTGAGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab