CircNet

General Information

circRNA Basic Information

CircID	chr6:393159\|393310
Strand	-
CircType	exon
Host Gene	ENSG00000137265.13;
Algorism	CIRI2;
Sequence	CTGGAGGGCGGCGGCCGAGGCGGAGAGTTCGGCATGAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCCAGTGGCTGATCGACCAGATCGACAGCGGCAAGTACCCCGGGCTGGTGTGGGAGAACGAGGAGAAGAGCATCTTCCGCATCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:393159\|393310	hsa-miR-150-5p	0	0	1
chr6:393159\|393310	hsa-miR-150-3p	0	0	1
chr6:393159\|393310	hsa-miR-942-5p	0	0	1
chr6:393159\|393310	hsa-miR-942-3p	0	0	1
chr6:393159\|393310	hsa-miR-1226-5p	0	0	1
chr6:393159\|393310	hsa-miR-1226-3p	0	0	1
chr6:393159\|393310	hsa-miR-532-3p	0	1	1
chr6:393159\|393310	hsa-miR-188-3p	0	0	1
chr6:393159\|393310	hsa-miR-663a	1	0	0
chr6:393159\|393310	hsa-miR-1538	1	1	0
chr6:393159\|393310	hsa-miR-3655	0	1	0
chr6:393159\|393310	hsa-miR-4641	1	0	0
chr6:393159\|393310	hsa-miR-4730	0	1	0
chr6:393159\|393310	hsa-miR-9901	1	0	0
chr6:393159\|393310	hsa-miR-4665-3p	0	1	0
chr6:393159\|393310	hsa-miR-6720-5p	1	0	0
chr6:393159\|393310	hsa-miR-4728-3p	0	1	0
chr6:393159\|393310	hsa-miR-6850-5p	1	0	0
chr6:393159\|393310	hsa-miR-6716-3p	0	1	0
chr6:393159\|393310	hsa-miR-4713-5p	0	1	0
chr6:393159\|393310	hsa-miR-1908-3p	0	1	0
chr6:393159\|393310	hsa-miR-4691-3p	0	1	0
chr6:393159\|393310	hsa-miR-4764-5p	0	1	0
chr6:393159\|393310	hsa-miR-1236-3p	0	1	0
chr6:393159\|393310	hsa-miR-629-3p	0	1	0
chr6:393159\|393310	hsa-miR-4632-3p	0	1	0
chr6:393159\|393310	hsa-miR-937-3p	1	0	0
chr6:393159\|393310	hsa-miR-6847-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:393159\|393310
ORF Type	ORF1
Protein Length	50
Nucleotide Length	150
Protein Sequence	LEGGGRGGEFGMSAVSCGNGKLRQWLIDQIDSGKYPGLVWENEEKSIFRI
Nucleotide Sequence	CTGGAGGGCGGCGGCCGAGGCGGAGAGTTCGGCATGAGCGCGGTGAGCTGCGGCAACGGGAAGCTCCGCCAGTGGCTGATCGACCAGATCGACAGCGGCAAGTACCCCGGGCTGGTGTGGGAGAACGAGGAGAAGAGCATCTTCCGCATC

CircID	chr6:393159\|393310
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MRQREAPPVADRPDRQRQVPRAGVGERGEEHLPHP
Nucleotide Sequence	CTGCGGCAACGGGAAGCTCCGCCAGTGGCTGATCGACCAGATCGACAGCGGCAAGTACCCCGGGCTGGTGTGGGAGAACGAGGAGAAGAGCATCTTCCGCATCCC

CircID	chr6:393159\|393310
ORF Type	ORF3
Protein Length	49
Nucleotide Length	147
Protein Sequence	MRKMLFSSFSHTSPGYLPLSIWSISHWRSFPLPQLTALMPNSPPRPPPS
Nucleotide Sequence	ATGCGGAAGATGCTCTTCTCCTCGTTCTCCCACACCAGCCCGGGGTACTTGCCGCTGTCGATCTGGTCGATCAGCCACTGGCGGAGCTTCCCGTTGCCGCAGCTCACCGCGCTCATGCCGAACTCTCCGCCTCGGCCGCCGCCCTCC

CircID	chr6:393159\|393310
ORF Type	ORF4
Protein Length	29
Nucleotide Length	87
Protein Sequence	MVDQPLAELPVAAAHRAHAELSASAAALQ
Nucleotide Sequence	CTGGTCGATCAGCCACTGGCGGAGCTTCCCGTTGCCGCAGCTCACCGCGCTCATGCCGAACTCTCCGCCTCGGCCGCCGCCCTCCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information