CircRNA Information

General Information
circRNA Basic Information
CircID chr6:41652167|41652501
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGGCATCTCCACTCCACACCGCAGCCAGAGGGATCCTTTAGAAATACCTGTTGGATCCTGGCCCTCCTCTGCTCAGACCCCTCCCATGGTTCACATGTCGCTTGTGATAAAAGCTGAAATCTTTGAAGTGGCCTCTGAGGCCCCCTGTAGTGTGGTCCCTGTGCCCTCTTAGTTCTCTTCTCCCACTCTTCTCCTCCAGATCACTCTGCTCTGGCCACGCCAGCCTCCTGGCTGCTCCTTGGCCATGCAGGCGCTGATTCCTCTGCCTGGAACAATCTTGCCACAGGCACGTGCTTGGCTGAGTCCCTCATCTCCTTCTTTGCCCAAATGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:41652167|41652501 hsa-miR-31-5p 0 0 1
chr6:41652167|41652501 hsa-miR-31-3p 0 0 1
chr6:41652167|41652501 hsa-miR-122-5p 0 0 1
chr6:41652167|41652501 hsa-miR-122-3p 0 0 1
chr6:41652167|41652501 hsa-miR-143-5p 0 0 1
chr6:41652167|41652501 hsa-miR-143-3p 0 0 1
chr6:41652167|41652501 hsa-miR-146a-5p 0 0 1
chr6:41652167|41652501 hsa-miR-146a-3p 0 0 1
chr6:41652167|41652501 hsa-miR-149-5p 0 0 1
chr6:41652167|41652501 hsa-miR-149-3p 0 0 1
chr6:41652167|41652501 hsa-miR-604 0 0 1
chr6:41652167|41652501 hsa-miR-620 0 0 1
chr6:41652167|41652501 hsa-miR-647 0 0 1
chr6:41652167|41652501 hsa-miR-765 1 1 1
chr6:41652167|41652501 hsa-miR-665 0 1 1
chr6:41652167|41652501 hsa-miR-1204 0 0 1
chr6:41652167|41652501 hsa-miR-1253 0 0 1
chr6:41652167|41652501 hsa-miR-1256 0 0 1
chr6:41652167|41652501 hsa-miR-1270 0 0 1
chr6:41652167|41652501 hsa-miR-513b-5p 0 0 1
chr6:41652167|41652501 hsa-miR-513b-3p 0 0 1
chr6:41652167|41652501 hsa-miR-512-5p 0 0 1
chr6:41652167|41652501 hsa-miR-485-5p 0 1 1
chr6:41652167|41652501 hsa-miR-576-5p 0 0 1
chr6:41652167|41652501 hsa-miR-146b-5p 0 1 1
chr6:41652167|41652501 hsa-miR-550 0 0 1
chr6:41652167|41652501 hsa-miR-642 0 0 1
chr6:41652167|41652501 hsa-miR-220c 0 0 1
chr6:41652167|41652501 hsa-miR-516b 0 0 1
chr6:41652167|41652501 hsa-miR-1245 0 0 1
chr6:41652167|41652501 hsa-miR-762 1 1 0
chr6:41652167|41652501 hsa-miR-760 1 0 0
chr6:41652167|41652501 hsa-miR-1275 1 0 0
chr6:41652167|41652501 hsa-miR-2278 0 1 0
chr6:41652167|41652501 hsa-miR-3131 1 0 0
chr6:41652167|41652501 hsa-miR-3132 1 1 0
chr6:41652167|41652501 hsa-miR-3141 1 0 0
chr6:41652167|41652501 hsa-miR-3147 1 1 0
chr6:41652167|41652501 hsa-miR-3154 1 1 0
chr6:41652167|41652501 hsa-miR-3175 1 0 0
chr6:41652167|41652501 hsa-miR-3185 1 0 0
chr6:41652167|41652501 hsa-miR-4303 0 1 0
chr6:41652167|41652501 hsa-miR-4271 1 0 0
chr6:41652167|41652501 hsa-miR-3911 0 1 0
chr6:41652167|41652501 hsa-miR-3916 0 1 0
chr6:41652167|41652501 hsa-miR-3945 1 0 0
chr6:41652167|41652501 hsa-miR-4428 0 1 0
chr6:41652167|41652501 hsa-miR-4430 1 0 0
chr6:41652167|41652501 hsa-miR-4437 1 0 0
chr6:41652167|41652501 hsa-miR-4476 1 0 0
chr6:41652167|41652501 hsa-miR-4486 1 0 0
chr6:41652167|41652501 hsa-miR-4498 0 1 0
chr6:41652167|41652501 hsa-miR-2392 1 0 0
chr6:41652167|41652501 hsa-miR-4516 1 1 0
chr6:41652167|41652501 hsa-miR-4644 1 0 0
chr6:41652167|41652501 hsa-miR-4648 1 0 0
chr6:41652167|41652501 hsa-miR-4651 1 0 0
chr6:41652167|41652501 hsa-miR-4654 1 0 0
chr6:41652167|41652501 hsa-miR-4656 1 0 0
chr6:41652167|41652501 hsa-miR-4673 0 1 0
chr6:41652167|41652501 hsa-miR-4689 1 1 0
chr6:41652167|41652501 hsa-miR-4692 0 1 0
chr6:41652167|41652501 hsa-miR-4739 1 1 0
chr6:41652167|41652501 hsa-miR-4754 1 0 0
chr6:41652167|41652501 hsa-miR-4767 1 0 0
chr6:41652167|41652501 hsa-miR-4784 1 1 0
chr6:41652167|41652501 hsa-miR-5194 1 1 0
chr6:41652167|41652501 hsa-miR-5698 1 0 0
chr6:41652167|41652501 hsa-miR-5703 1 1 0
chr6:41652167|41652501 hsa-miR-5739 1 0 0
chr6:41652167|41652501 hsa-miR-5787 1 0 0
chr6:41652167|41652501 hsa-miR-6081 0 1 0
chr6:41652167|41652501 hsa-miR-6085 1 0 0
chr6:41652167|41652501 hsa-miR-6133 1 0 0
chr6:41652167|41652501 hsa-miR-6165 1 0 0
chr6:41652167|41652501 hsa-miR-6745 1 0 0
chr6:41652167|41652501 hsa-miR-8085 1 1 0
chr6:41652167|41652501 hsa-miR-9500 1 0 0
chr6:41652167|41652501 hsa-miR-12118 1 1 0
chr6:41652167|41652501 hsa-miR-211-3p 1 1 0
chr6:41652167|41652501 hsa-miR-150-3p 1 0 0
chr6:41652167|41652501 hsa-miR-4435 0 1 0
chr6:41652167|41652501 hsa-miR-4433b-3p 1 1 0
chr6:41652167|41652501 hsa-miR-6734-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4731-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3157-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6747-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6809-5p 1 1 0
chr6:41652167|41652501 hsa-miR-4433a-3p 1 0 0
chr6:41652167|41652501 hsa-miR-7106-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6894-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6799-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6510-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6728-5p 1 0 0
chr6:41652167|41652501 hsa-miR-766-5p 0 1 0
chr6:41652167|41652501 hsa-miR-1236-5p 1 0 0
chr6:41652167|41652501 hsa-miR-5187-5p 1 1 0
chr6:41652167|41652501 hsa-miR-7114-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6089 1 0 0
chr6:41652167|41652501 hsa-miR-3192-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6873-5p 1 0 0
chr6:41652167|41652501 hsa-miR-7847-3p 1 0 0
chr6:41652167|41652501 hsa-miR-4695-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6746-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3064-5p 1 1 0
chr6:41652167|41652501 hsa-miR-3677-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6730-5p 1 0 0
chr6:41652167|41652501 hsa-miR-7154-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6727-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3622b-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6721-5p 1 0 0
chr6:41652167|41652501 hsa-miR-197-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6776-5p 1 0 0
chr6:41652167|41652501 hsa-miR-7108-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3151-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6796-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6805-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6827-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6798-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6770-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3126-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6760-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6881-5p 1 0 0
chr6:41652167|41652501 hsa-miR-2467-3p 0 1 0
chr6:41652167|41652501 hsa-miR-6782-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6888-5p 0 1 0
chr6:41652167|41652501 hsa-miR-7855-5p 1 0 0
chr6:41652167|41652501 hsa-miR-5006-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6786-5p 1 0 0
chr6:41652167|41652501 hsa-miR-5088-5p 1 0 0
chr6:41652167|41652501 hsa-miR-1226-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6740-5p 1 0 0
chr6:41652167|41652501 hsa-miR-2277-3p 1 0 0
chr6:41652167|41652501 hsa-miR-193b-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4640-5p 1 1 0
chr6:41652167|41652501 hsa-miR-3691-5p 1 0 0
chr6:41652167|41652501 hsa-miR-885-3p 1 1 0
chr6:41652167|41652501 hsa-miR-1228-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6771-5p 1 0 0
chr6:41652167|41652501 hsa-miR-767-5p 1 0 0
chr6:41652167|41652501 hsa-miR-877-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6847-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6834-5p 0 1 0
chr6:41652167|41652501 hsa-miR-4743-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3616-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6830-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6824-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3925-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6878-5p 1 1 0
chr6:41652167|41652501 hsa-miR-516b-5p 1 1 0
chr6:41652167|41652501 hsa-miR-4800-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6895-5p 0 1 0
chr6:41652167|41652501 hsa-miR-664b-5p 1 0 0
chr6:41652167|41652501 hsa-miR-423-5p 1 0 0
chr6:41652167|41652501 hsa-miR-7846-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6499-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4661-3p 0 1 0
chr6:41652167|41652501 hsa-miR-6720-3p 0 1 0
chr6:41652167|41652501 hsa-miR-518c-5p 1 0 0
chr6:41652167|41652501 hsa-miR-5197-3p 0 1 0
chr6:41652167|41652501 hsa-miR-5002-5p 1 0 0
chr6:41652167|41652501 hsa-miR-1207-5p 1 0 0
chr6:41652167|41652501 hsa-miR-1233-5p 1 1 0
chr6:41652167|41652501 hsa-miR-1273h-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4763-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6769b-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6778-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6787-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6870-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6743-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6752-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6756-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6803-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6819-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6842-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6851-5p 1 0 0
chr6:41652167|41652501 hsa-miR-7110-5p 1 0 0
chr6:41652167|41652501 hsa-miR-10401-5p 1 0 0
chr6:41652167|41652501 hsa-miR-11181-3p 1 1 0
chr6:41652167|41652501 hsa-miR-1249-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6722-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6774-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6779-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6780a-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6788-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6797-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6875-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6879-5p 1 0 0
chr6:41652167|41652501 hsa-miR-7111-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4728-5p 1 1 0
chr6:41652167|41652501 hsa-miR-5189-5p 0 1 0
chr6:41652167|41652501 hsa-miR-5196-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6780b-5p 1 0 0
chr6:41652167|41652501 hsa-miR-1237-5p 1 0 0
chr6:41652167|41652501 hsa-miR-328-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4649-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4685-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4726-5p 1 1 0
chr6:41652167|41652501 hsa-miR-4745-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6729-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6735-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6738-5p 1 1 0
chr6:41652167|41652501 hsa-miR-6795-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6846-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6848-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6883-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6887-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4723-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6845-5p 1 1 0
chr6:41652167|41652501 hsa-miR-1238-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4758-5p 1 0 0
chr6:41652167|41652501 hsa-miR-4769-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6731-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6856-5p 1 0 0
chr6:41652167|41652501 hsa-miR-1285-3p 1 0 0
chr6:41652167|41652501 hsa-miR-1271-3p 0 1 0
chr6:41652167|41652501 hsa-miR-7843-5p 1 0 0
chr6:41652167|41652501 hsa-miR-1914-3p 1 1 0
chr6:41652167|41652501 hsa-miR-4665-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6855-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6891-5p 1 1 0
chr6:41652167|41652501 hsa-miR-4716-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6766-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6785-5p 1 0 0
chr6:41652167|41652501 hsa-miR-3184-5p 1 1 0
chr6:41652167|41652501 hsa-miR-550a-3-5p 0 1 0
chr6:41652167|41652501 hsa-miR-550a-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6762-5p 0 1 0
chr6:41652167|41652501 hsa-miR-6718-5p 1 0 0
chr6:41652167|41652501 hsa-miR-6859-5p 0 1 0
chr6:41652167|41652501 hsa-miR-99b-3p 1 0 0
chr6:41652167|41652501 hsa-miR-6504-5p 1 1 0
chr6:41652167|41652501 hsa-miR-10399-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:41652167|41652501
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MKSLKWPLRPPVVWSLCPLSSLLPLFSSRSLCSGHASLLAAPWPCRR
Nucleotide Sequence CTGAAATCTTTGAAGTGGCCTCTGAGGCCCCCTGTAGTGTGGTCCCTGTGCCCTCTTAGTTCTCTTCTCCCACTCTTCTCCTCCAGATCACTCTGCTCTGGCCACGCCAGCCTCCTGGCTGCTCCTTGGCCATGCAGGCGCTGA

CircID chr6:41652167|41652501
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MATPASWLLLGHAGADSSAWNNLATGTCLAESLISFFAQMP
Nucleotide Sequence CTGGCCACGCCAGCCTCCTGGCTGCTCCTTGGCCATGCAGGCGCTGATTCCTCTGCCTGGAACAATCTTGCCACAGGCACGTGCTTGGCTGAGTCCCTCATCTCCTTCTTTGCCCAAATGCCA

CircID chr6:41652167|41652501
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MVHMSLVIKAEIFEVASEAPCSVVPVPS
Nucleotide Sequence ATGGTTCACATGTCGCTTGTGATAAAAGCTGAAATCTTTGAAGTGGCCTCTGAGGCCCCCTGTAGTGTGGTCCCTGTGCCCTCTTAG

CircID chr6:41652167|41652501
ORF Type ORF4
Protein Length 43
Nucleotide Length 129
Protein Sequence MLWPRQPPGCSLAMQALIPLPGTILPQARAWLSPSSPSLPKCH
Nucleotide Sequence CTGCTCTGGCCACGCCAGCCTCCTGGCTGCTCCTTGGCCATGCAGGCGCTGATTCCTCTGCCTGGAACAATCTTGCCACAGGCACGTGCTTGGCTGAGTCCCTCATCTCCTTCTTTGCCCAAATGCCAC

CircID chr6:41652167|41652501
ORF Type ORF5
Protein Length 82
Nucleotide Length 249
Protein Sequence MWQDCSRQRNQRLHGQGAARRLAWPEQSDLEEKSGRRELRGHRDHTTGGLRGHFKDFSFYHKRHVNHGRGLSRGGPGSNRYF
Nucleotide Sequence CTGTGGCAAGATTGTTCCAGGCAGAGGAATCAGCGCCTGCATGGCCAAGGAGCAGCCAGGAGGCTGGCGTGGCCAGAGCAGAGTGATCTGGAGGAGAAGAGTGGGAGAAGAGAACTAAGAGGGCACAGGGACCACACTACAGGGGGCCTCAGAGGCCACTTCAAAGATTTCAGCTTTTATCACAAGCGACATGTGAACCATGGGAGGGGTCTGAGCAGAGGAGGGCCAGGATCCAACAGGTATTTCTAA

CircID chr6:41652167|41652501
ORF Type ORF6
Protein Length 52
Nucleotide Length 159
Protein Sequence MGKEGDEGLSQARACGKIVPGRGISACMAKEQPGGWRGQSRVIWRRRVGEEN
Nucleotide Sequence TTGGGCAAAGAAGGAGATGAGGGACTCAGCCAAGCACGTGCCTGTGGCAAGATTGTTCCAGGCAGAGGAATCAGCGCCTGCATGGCCAAGGAGCAGCCAGGAGGCTGGCGTGGCCAGAGCAGAGTGATCTGGAGGAGAAGAGTGGGAGAAGAGAACTAA

CircID chr6:41652167|41652501
ORF Type ORF7
Protein Length 36
Nucleotide Length 111
Protein Sequence MRDSAKHVPVARLFQAEESAPAWPRSSQEAGVARAE
Nucleotide Sequence ATGAGGGACTCAGCCAAGCACGTGCCTGTGGCAAGATTGTTCCAGGCAGAGGAATCAGCGCCTGCATGGCCAAGGAGCAGCCAGGAGGCTGGCGTGGCCAGAGCAGAGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites