CircRNA Information

General Information
circRNA Basic Information
CircID chr6:41653486|41653799
Strand -
CircType exon
Host Gene ENSG00000112559.12;
Algorism CIRI2;
Sequence CTGGACTGCGGCATCCTGGATGCCTGCTGCGAGTCCGCGGACTGCCTGGAGATCTGCATGGAGTGCTGTGGGCTCTGCTTCTCCTCCTGAGCCTCTGTCGGGGGCTAAGCCAGCCTGGCGCCCCTGCAGATTCCAGCAGGGTCCCTCTGAGTGGGGCCAGGCCCAGGACTGTCACACAAGGCTTGAGAAGCCCCCTCTCCCTGGTCCTCTCCTACCCACCCATGTCCTCTCAGAACCCCAGCCTTGAAAATAGTGGGGGGCACTCAGAGGGGCCACCTCCTCAGCCGTGGGTGGTGGGCCCATGGCAGAGAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:41653486|41653799 hsa-miR-214-5p 0 0 1
chr6:41653486|41653799 hsa-miR-214-3p 0 0 1
chr6:41653486|41653799 hsa-miR-370-5p 0 0 1
chr6:41653486|41653799 hsa-miR-370-3p 0 0 1
chr6:41653486|41653799 hsa-miR-498-5p 0 0 1
chr6:41653486|41653799 hsa-miR-498-3p 0 0 1
chr6:41653486|41653799 hsa-miR-504-5p 0 0 1
chr6:41653486|41653799 hsa-miR-504-3p 0 0 1
chr6:41653486|41653799 hsa-miR-581 0 0 1
chr6:41653486|41653799 hsa-miR-766-5p 0 0 1
chr6:41653486|41653799 hsa-miR-766-3p 0 0 1
chr6:41653486|41653799 hsa-miR-765 0 1 1
chr6:41653486|41653799 hsa-miR-665 0 0 1
chr6:41653486|41653799 hsa-miR-942-5p 0 0 1
chr6:41653486|41653799 hsa-miR-942-3p 0 0 1
chr6:41653486|41653799 hsa-miR-663b 0 0 1
chr6:41653486|41653799 hsa-miR-1205 0 0 1
chr6:41653486|41653799 hsa-miR-1287-5p 0 0 1
chr6:41653486|41653799 hsa-miR-1287-3p 0 0 1
chr6:41653486|41653799 hsa-miR-1293 0 0 1
chr6:41653486|41653799 hsa-miR-1305 0 0 1
chr6:41653486|41653799 hsa-miR-513c-5p 0 0 1
chr6:41653486|41653799 hsa-miR-513c-3p 0 0 1
chr6:41653486|41653799 hsa-miR-296-5p 0 0 1
chr6:41653486|41653799 hsa-miR-1184 0 0 1
chr6:41653486|41653799 hsa-miR-455-3p 0 0 1
chr6:41653486|41653799 hsa-miR-542-3p 0 0 1
chr6:41653486|41653799 hsa-miR-220b 0 0 1
chr6:41653486|41653799 hsa-miR-1308 0 0 1
chr6:41653486|41653799 hsa-miR-24 0 0 1
chr6:41653486|41653799 hsa-miR-147 0 0 1
chr6:41653486|41653799 hsa-miR-762 1 0 0
chr6:41653486|41653799 hsa-miR-2861 0 1 0
chr6:41653486|41653799 hsa-miR-3132 1 0 0
chr6:41653486|41653799 hsa-miR-3170 1 1 0
chr6:41653486|41653799 hsa-miR-4270 0 1 0
chr6:41653486|41653799 hsa-miR-3921 0 1 0
chr6:41653486|41653799 hsa-miR-4429 1 0 0
chr6:41653486|41653799 hsa-miR-4434 0 1 0
chr6:41653486|41653799 hsa-miR-4481 1 0 0
chr6:41653486|41653799 hsa-miR-4488 1 0 0
chr6:41653486|41653799 hsa-miR-4505 1 1 0
chr6:41653486|41653799 hsa-miR-2392 1 0 0
chr6:41653486|41653799 hsa-miR-4507 1 0 0
chr6:41653486|41653799 hsa-miR-1587 1 0 0
chr6:41653486|41653799 hsa-miR-4651 1 0 0
chr6:41653486|41653799 hsa-miR-4656 1 1 0
chr6:41653486|41653799 hsa-miR-4673 0 1 0
chr6:41653486|41653799 hsa-miR-4689 1 0 0
chr6:41653486|41653799 hsa-miR-4692 0 1 0
chr6:41653486|41653799 hsa-miR-4739 1 0 0
chr6:41653486|41653799 hsa-miR-4784 0 1 0
chr6:41653486|41653799 hsa-miR-5787 1 1 0
chr6:41653486|41653799 hsa-miR-6132 1 0 0
chr6:41653486|41653799 hsa-miR-8085 0 1 0
chr6:41653486|41653799 hsa-miR-8089 1 0 0
chr6:41653486|41653799 hsa-miR-9899 0 1 0
chr6:41653486|41653799 hsa-miR-12119 1 0 0
chr6:41653486|41653799 hsa-miR-12128 1 0 0
chr6:41653486|41653799 hsa-miR-6734-5p 1 0 0
chr6:41653486|41653799 hsa-miR-4731-5p 1 0 0
chr6:41653486|41653799 hsa-miR-7155-5p 0 1 0
chr6:41653486|41653799 hsa-miR-6765-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6861-5p 1 0 0
chr6:41653486|41653799 hsa-miR-7106-5p 1 0 0
chr6:41653486|41653799 hsa-miR-210-5p 1 0 0
chr6:41653486|41653799 hsa-miR-3692-5p 0 1 0
chr6:41653486|41653799 hsa-miR-6089 1 0 0
chr6:41653486|41653799 hsa-miR-3192-5p 1 0 0
chr6:41653486|41653799 hsa-miR-874-5p 0 1 0
chr6:41653486|41653799 hsa-miR-197-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6748-5p 1 1 0
chr6:41653486|41653799 hsa-miR-185-3p 1 0 0
chr6:41653486|41653799 hsa-miR-6732-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6798-5p 1 1 0
chr6:41653486|41653799 hsa-miR-6782-5p 1 0 0
chr6:41653486|41653799 hsa-miR-1343-3p 0 1 0
chr6:41653486|41653799 hsa-miR-6852-5p 1 1 0
chr6:41653486|41653799 hsa-miR-939-3p 0 1 0
chr6:41653486|41653799 hsa-miR-1226-5p 1 0 0
chr6:41653486|41653799 hsa-miR-1229-5p 1 1 0
chr6:41653486|41653799 hsa-miR-193b-5p 1 1 0
chr6:41653486|41653799 hsa-miR-4640-5p 0 1 0
chr6:41653486|41653799 hsa-miR-6753-5p 0 1 0
chr6:41653486|41653799 hsa-miR-3127-5p 1 0 0
chr6:41653486|41653799 hsa-miR-7161-3p 1 0 0
chr6:41653486|41653799 hsa-miR-6847-5p 1 1 0
chr6:41653486|41653799 hsa-miR-4446-3p 1 0 0
chr6:41653486|41653799 hsa-miR-1910-5p 0 1 0
chr6:41653486|41653799 hsa-miR-7113-5p 0 1 0
chr6:41653486|41653799 hsa-miR-4749-3p 0 1 0
chr6:41653486|41653799 hsa-miR-6761-5p 0 1 0
chr6:41653486|41653799 hsa-miR-3670 0 1 0
chr6:41653486|41653799 hsa-miR-3664-3p 0 1 0
chr6:41653486|41653799 hsa-miR-371b-3p 0 1 0
chr6:41653486|41653799 hsa-miR-6838-3p 0 1 0
chr6:41653486|41653799 hsa-miR-4727-5p 0 1 0
chr6:41653486|41653799 hsa-miR-5581-3p 0 1 0
chr6:41653486|41653799 hsa-miR-1233-5p 1 0 0
chr6:41653486|41653799 hsa-miR-4763-3p 1 0 0
chr6:41653486|41653799 hsa-miR-6769b-5p 1 1 0
chr6:41653486|41653799 hsa-miR-6778-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6812-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6737-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6752-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6754-5p 1 1 0
chr6:41653486|41653799 hsa-miR-6756-5p 1 1 0
chr6:41653486|41653799 hsa-miR-6769a-5p 1 1 0
chr6:41653486|41653799 hsa-miR-6819-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6851-5p 0 1 0
chr6:41653486|41653799 hsa-miR-11181-3p 0 1 0
chr6:41653486|41653799 hsa-miR-6722-3p 1 1 0
chr6:41653486|41653799 hsa-miR-6774-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6779-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6780a-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6875-5p 0 1 0
chr6:41653486|41653799 hsa-miR-6879-5p 1 0 0
chr6:41653486|41653799 hsa-miR-3620-5p 1 0 0
chr6:41653486|41653799 hsa-miR-4728-5p 1 0 0
chr6:41653486|41653799 hsa-miR-1237-5p 1 0 0
chr6:41653486|41653799 hsa-miR-1909-3p 0 1 0
chr6:41653486|41653799 hsa-miR-449c-5p 0 1 0
chr6:41653486|41653799 hsa-miR-4649-5p 1 0 0
chr6:41653486|41653799 hsa-miR-4685-5p 1 0 0
chr6:41653486|41653799 hsa-miR-4749-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6729-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6848-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6858-5p 1 1 0
chr6:41653486|41653799 hsa-miR-4697-5p 1 0 0
chr6:41653486|41653799 hsa-miR-4758-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6856-5p 1 1 0
chr6:41653486|41653799 hsa-miR-1914-3p 1 0 0
chr6:41653486|41653799 hsa-miR-6855-5p 0 1 0
chr6:41653486|41653799 hsa-miR-4700-5p 1 0 0
chr6:41653486|41653799 hsa-miR-3679-5p 1 1 0
chr6:41653486|41653799 hsa-miR-4646-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6766-5p 1 1 0
chr6:41653486|41653799 hsa-miR-6724-5p 0 1 0
chr6:41653486|41653799 hsa-miR-320a-3p 1 0 0
chr6:41653486|41653799 hsa-miR-320b 1 0 0
chr6:41653486|41653799 hsa-miR-320c 1 0 0
chr6:41653486|41653799 hsa-miR-4723-3p 0 1 0
chr6:41653486|41653799 hsa-miR-6859-5p 1 0 0
chr6:41653486|41653799 hsa-miR-6783-3p 0 1 0
chr6:41653486|41653799 hsa-miR-3619-5p 1 1 0
chr6:41653486|41653799 hsa-miR-320d 1 0 0
chr6:41653486|41653799 hsa-miR-4769-3p 0 1 0
chr6:41653486|41653799 hsa-miR-10524-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:41653486|41653799
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence LDCGILDACCESADCLEICMECCGLCFSS
Nucleotide Sequence CTGGACTGCGGCATCCTGGATGCCTGCTGCGAGTCCGCGGACTGCCTGGAGATCTGCATGGAGTGCTGTGGGCTCTGCTTCTCCTCCTGA

CircID chr6:41653486|41653799
ORF Type ORF2
Protein Length 75
Nucleotide Length 228
Protein Sequence MPAASPRTAWRSAWSAVGSASPPEPLSGAKPAWRPCRFQQGPSEWGQAQDCHTRLEKPPLPGPLLPTHVLSEPQP
Nucleotide Sequence ATGCCTGCTGCGAGTCCGCGGACTGCCTGGAGATCTGCATGGAGTGCTGTGGGCTCTGCTTCTCCTCCTGAGCCTCTGTCGGGGGCTAAGCCAGCCTGGCGCCCCTGCAGATTCCAGCAGGGTCCCTCTGAGTGGGGCCAGGCCCAGGACTGTCACACAAGGCTTGAGAAGCCCCCTCTCCCTGGTCCTCTCCTACCCACCCATGTCCTCTCAGAACCCCAGCCTTGA

CircID chr6:41653486|41653799
ORF Type ORF3
Protein Length 103
Nucleotide Length 309
Protein Sequence MRHPGCLLRVRGLPGDLHGVLWALLLLLSLCRGLSQPGAPADSSRVPLSGARPRTVTQGLRSPLSLVLSYPPMSSQNPSLENSGGHSEGPPPQPWVVGPWQRS
Nucleotide Sequence CTGCGGCATCCTGGATGCCTGCTGCGAGTCCGCGGACTGCCTGGAGATCTGCATGGAGTGCTGTGGGCTCTGCTTCTCCTCCTGAGCCTCTGTCGGGGGCTAAGCCAGCCTGGCGCCCCTGCAGATTCCAGCAGGGTCCCTCTGAGTGGGGCCAGGCCCAGGACTGTCACACAAGGCTTGAGAAGCCCCCTCTCCCTGGTCCTCTCCTACCCACCCATGTCCTCTCAGAACCCCAGCCTTGAAAATAGTGGGGGGCACTCAGAGGGGCCACCTCCTCAGCCGTGGGTGGTGGGCCCATGGCAGAGAAGC

CircID chr6:41653486|41653799
ORF Type ORF4
Protein Length 42
Nucleotide Length 129
Protein Sequence MRGHGWVGEDQGEGASQALCDSPGPGPTQRDPAGICRGARLA
Nucleotide Sequence CTGAGAGGACATGGGTGGGTAGGAGAGGACCAGGGAGAGGGGGCTTCTCAAGCCTTGTGTGACAGTCCTGGGCCTGGCCCCACTCAGAGGGACCCTGCTGGAATCTGCAGGGGCGCCAGGCTGGCTTAG

CircID chr6:41653486|41653799
ORF Type ORF5
Protein Length 55
Nucleotide Length 165
Protein Sequence MGLAPLRGTLLESAGAPGWLSPRQRLRRRSRAHSTPCRSPGSPRTRSRHPGCRSP
Nucleotide Sequence CTGGGCCTGGCCCCACTCAGAGGGACCCTGCTGGAATCTGCAGGGGCGCCAGGCTGGCTTAGCCCCCGACAGAGGCTCAGGAGGAGAAGCAGAGCCCACAGCACTCCATGCAGATCTCCAGGCAGTCCGCGGACTCGCAGCAGGCATCCAGGATGCCGCAGTCCA

CircID chr6:41653486|41653799
ORF Type ORF6
Protein Length 43
Nucleotide Length 132
Protein Sequence MGPPPTAEEVAPLSAPHYFQGWGSERTWVGRRGPGRGGFSSLV
Nucleotide Sequence ATGGGCCCACCACCCACGGCTGAGGAGGTGGCCCCTCTGAGTGCCCCCCACTATTTTCAAGGCTGGGGTTCTGAGAGGACATGGGTGGGTAGGAGAGGACCAGGGAGAGGGGGCTTCTCAAGCCTTGTGTGA

CircID chr6:41653486|41653799
ORF Type ORF7
Protein Length 43
Nucleotide Length 129
Protein Sequence MQGRQAGLAPDRGSGGEAEPTALHADLQAVRGLAAGIQDAAVQ
Nucleotide Sequence CTGCAGGGGCGCCAGGCTGGCTTAGCCCCCGACAGAGGCTCAGGAGGAGAAGCAGAGCCCACAGCACTCCATGCAGATCTCCAGGCAGTCCGCGGACTCGCAGCAGGCATCCAGGATGCCGCAGTCCAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites