CircRNA Information

General Information
circRNA Basic Information
CircID chr6:41742302|41742465
Strand +
CircType exon
Host Gene ENSG00000096088.15;
Algorism CIRI2;
Sequence CAGGAGTTCGGCTTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCCCTCACCAGCCCCGTCTTCAGCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:41742302|41742465 hsa-miR-484 0 1 1
chr6:41742302|41742465 hsa-miR-874-5p 0 0 1
chr6:41742302|41742465 hsa-miR-874-3p 0 0 1
chr6:41742302|41742465 hsa-miR-1229-5p 0 0 1
chr6:41742302|41742465 hsa-miR-1229-3p 0 0 1
chr6:41742302|41742465 hsa-miR-1263 0 0 1
chr6:41742302|41742465 hsa-miR-1322 0 0 1
chr6:41742302|41742465 hsa-miR-767-5p 0 1 1
chr6:41742302|41742465 hsa-miR-146b-3p 0 0 1
chr6:41742302|41742465 hsa-miR-483-5p 0 0 1
chr6:41742302|41742465 hsa-miR-153 0 0 1
chr6:41742302|41742465 hsa-miR-138 0 0 1
chr6:41742302|41742465 hsa-miR-762 0 1 0
chr6:41742302|41742465 hsa-miR-1976 0 1 0
chr6:41742302|41742465 hsa-miR-2278 0 1 0
chr6:41742302|41742465 hsa-miR-4492 0 1 0
chr6:41742302|41742465 hsa-miR-4498 0 1 0
chr6:41742302|41742465 hsa-miR-4508 1 1 0
chr6:41742302|41742465 hsa-miR-4647 0 1 0
chr6:41742302|41742465 hsa-miR-4710 0 1 0
chr6:41742302|41742465 hsa-miR-5092 0 1 0
chr6:41742302|41742465 hsa-miR-5704 0 1 0
chr6:41742302|41742465 hsa-miR-6069 1 0 0
chr6:41742302|41742465 hsa-miR-6081 0 1 0
chr6:41742302|41742465 hsa-miR-6085 1 0 0
chr6:41742302|41742465 hsa-miR-9899 0 1 0
chr6:41742302|41742465 hsa-miR-6861-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6510-5p 0 1 0
chr6:41742302|41742465 hsa-miR-6089 1 0 0
chr6:41742302|41742465 hsa-miR-4755-3p 0 1 0
chr6:41742302|41742465 hsa-miR-593-5p 0 1 0
chr6:41742302|41742465 hsa-miR-7160-5p 1 1 0
chr6:41742302|41742465 hsa-miR-7855-5p 0 1 0
chr6:41742302|41742465 hsa-miR-1226-5p 0 1 0
chr6:41742302|41742465 hsa-miR-3944-3p 1 0 0
chr6:41742302|41742465 hsa-miR-6784-5p 1 0 0
chr6:41742302|41742465 hsa-miR-4690-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6823-5p 1 0 0
chr6:41742302|41742465 hsa-miR-4787-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6824-5p 1 0 0
chr6:41742302|41742465 hsa-miR-1237-3p 0 1 0
chr6:41742302|41742465 hsa-miR-660-3p 0 1 0
chr6:41742302|41742465 hsa-miR-744-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6758-3p 0 1 0
chr6:41742302|41742465 hsa-miR-6501-3p 0 1 0
chr6:41742302|41742465 hsa-miR-6775-5p 1 0 0
chr6:41742302|41742465 hsa-miR-5001-5p 0 1 0
chr6:41742302|41742465 hsa-miR-6743-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6803-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6722-3p 1 0 0
chr6:41742302|41742465 hsa-miR-6751-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6879-5p 0 1 0
chr6:41742302|41742465 hsa-miR-6836-5p 1 0 0
chr6:41742302|41742465 hsa-miR-10396b-5p 1 0 0
chr6:41742302|41742465 hsa-miR-1909-3p 1 0 0
chr6:41742302|41742465 hsa-miR-4632-5p 0 1 0
chr6:41742302|41742465 hsa-miR-6846-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6848-5p 1 0 0
chr6:41742302|41742465 hsa-miR-3085-5p 1 0 0
chr6:41742302|41742465 hsa-miR-6799-3p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:41742302|41742465
ORF Type ORF1
Protein Length 50
Nucleotide Length 150
Protein Sequence MSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFS
Nucleotide Sequence TTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCCCTCACCAGCCCCGTCTTCAGC

CircID chr6:41742302|41742465
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MSLVPTSSMRSLMASWAWPTLLCPWMRPPQLCRAWCRRAPSPAPSSA
Nucleotide Sequence ATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCCCTCACCAGCCCCGTCTTCAGCG

CircID chr6:41742302|41742465
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MKTGLVRAPSCTMPCIAVVASSTDRAG
Nucleotide Sequence CTGAAGACGGGGCTGGTGAGGGCGCCCTCCTGCACCATGCCCTGCATAGCTGTGGTGGCCTCATCCACGGACAGAGCAGGGTAG

CircID chr6:41742302|41742465
ORF Type ORF4
Protein Length 44
Nucleotide Length 132
Protein Sequence MHHALHSCGGLIHGQSRVGQAHDAIKLRIDEVGTRLILTQAELL
Nucleotide Sequence CTGCACCATGCCCTGCATAGCTGTGGTGGCCTCATCCACGGACAGAGCAGGGTAGGCCAGGCCCATGATGCCATCAAACTGCGCATAGACGAAGTTGGTACCAGGCTCATTCTCACTCAAGCCGAACTCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites