CircRNA Information

General Information
circRNA Basic Information
CircID chr6:41742325|41742465
Strand +
CircType exon
Host Gene ENSG00000096088.15;
Algorism CIRI2;
Sequence CAGGAGTTCGGCTTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:41742325|41742465 hsa-miR-484 0 1 1
chr6:41742325|41742465 hsa-miR-874-5p 0 0 1
chr6:41742325|41742465 hsa-miR-874-3p 0 0 1
chr6:41742325|41742465 hsa-miR-1229-5p 0 0 1
chr6:41742325|41742465 hsa-miR-1229-3p 0 0 1
chr6:41742325|41742465 hsa-miR-1263 0 0 1
chr6:41742325|41742465 hsa-miR-1322 0 0 1
chr6:41742325|41742465 hsa-miR-767-5p 0 1 1
chr6:41742325|41742465 hsa-miR-146b-3p 0 0 1
chr6:41742325|41742465 hsa-miR-153 0 0 1
chr6:41742325|41742465 hsa-miR-1976 0 1 0
chr6:41742325|41742465 hsa-miR-2278 0 1 0
chr6:41742325|41742465 hsa-miR-5092 0 1 0
chr6:41742325|41742465 hsa-miR-5704 0 1 0
chr6:41742325|41742465 hsa-miR-6069 1 0 0
chr6:41742325|41742465 hsa-miR-6081 0 1 0
chr6:41742325|41742465 hsa-miR-6861-5p 1 0 0
chr6:41742325|41742465 hsa-miR-6510-5p 0 1 0
chr6:41742325|41742465 hsa-miR-4755-3p 0 1 0
chr6:41742325|41742465 hsa-miR-593-5p 0 1 0
chr6:41742325|41742465 hsa-miR-4690-5p 1 0 0
chr6:41742325|41742465 hsa-miR-6824-5p 1 0 0
chr6:41742325|41742465 hsa-miR-1237-3p 0 1 0
chr6:41742325|41742465 hsa-miR-660-3p 0 1 0
chr6:41742325|41742465 hsa-miR-6758-3p 0 1 0
chr6:41742325|41742465 hsa-miR-6501-3p 0 1 0
chr6:41742325|41742465 hsa-miR-6743-5p 1 0 0
chr6:41742325|41742465 hsa-miR-6722-3p 1 0 0
chr6:41742325|41742465 hsa-miR-6879-5p 0 1 0
chr6:41742325|41742465 hsa-miR-6836-5p 1 0 0
chr6:41742325|41742465 hsa-miR-10396b-5p 1 0 0
chr6:41742325|41742465 hsa-miR-1909-3p 1 0 0
chr6:41742325|41742465 hsa-miR-4632-5p 0 1 0
chr6:41742325|41742465 hsa-miR-3085-5p 1 0 0
chr6:41742325|41742465 hsa-miR-6799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:41742325|41742465
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGA
Nucleotide Sequence TTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCGCC

CircID chr6:41742325|41742465
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MSLVPTSSMRSLMASWAWPTLLCPWMRPPQLCRAWCRRA
Nucleotide Sequence ATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACCCTGCTCTGTCCGTGGATGAGGCCACCACAGCTATGCAGGGCATGGTGCAGGAGGGCG

CircID chr6:41742325|41742465
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MHHALHSCGGLIHGQSRVGQAHDAIKLRIDEVGTRLILTQAELL
Nucleotide Sequence CTGCACCATGCCCTGCATAGCTGTGGTGGCCTCATCCACGGACAGAGCAGGGTAGGCCAGGCCCATGATGCCATCAAACTGCGCATAGACGAAGTTGGTACCAGGCTCATTCTCACTCAAGCCGAACTCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites