CircNet

General Information

circRNA Basic Information

CircID	chr6:41742384\|41743343
Strand	+
CircType	exon
Host Gene	ENSG00000096088.15;
Algorism	CIRI2;
Sequence	CAATGGGCAGACCTTCTCCCTGCAGTATGGCAGTGGCAGCCTCACCGGCTTCTTTGGCTATGACACCCTGACTGTCCAGAGCATCCAGGTCCCCAACCAGGAGTTCGGCTTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTACC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:41742384\|41743343	hsa-miR-217-5p	0	0	1
chr6:41742384\|41743343	hsa-miR-217-3p	0	0	1
chr6:41742384\|41743343	hsa-miR-346	0	0	1
chr6:41742384\|41743343	hsa-miR-422a	-14	0	1
chr6:41742384\|41743343	hsa-miR-484	-11	1	1
chr6:41742384\|41743343	hsa-miR-492	-9	0	1
chr6:41742384\|41743343	hsa-miR-493-5p	0	0	1
chr6:41742384\|41743343	hsa-miR-493-3p	0	0	1
chr6:41742384\|41743343	hsa-miR-619-5p	0	0	1
chr6:41742384\|41743343	hsa-miR-619-3p	0	0	1
chr6:41742384\|41743343	hsa-miR-631	-8	0	1
chr6:41742384\|41743343	hsa-miR-1229-5p	0	0	1
chr6:41742384\|41743343	hsa-miR-1229-3p	0	0	1
chr6:41742384\|41743343	hsa-miR-1205	-8	0	1
chr6:41742384\|41743343	hsa-miR-1263	-9	0	1
chr6:41742384\|41743343	hsa-miR-1322	-5	0	1
chr6:41742384\|41743343	hsa-miR-485-5p	-9	0	1
chr6:41742384\|41743343	hsa-miR-324-3p	-18	1	1
chr6:41742384\|41743343	hsa-miR-509-3-5p	-1	0	1
chr6:41742384\|41743343	hsa-miR-509-5p	-1	0	1
chr6:41742384\|41743343	hsa-miR-378	0	0	1
chr6:41742384\|41743343	hsa-miR-1294	-16	1	0
chr6:41742384\|41743343	hsa-miR-3185	-14	1	0
chr6:41742384\|41743343	hsa-miR-3649	-12	1	0
chr6:41742384\|41743343	hsa-miR-3661	-18	1	0
chr6:41742384\|41743343	hsa-miR-4441	-13	1	0
chr6:41742384\|41743343	hsa-miR-5704	-7	1	0
chr6:41742384\|41743343	hsa-miR-9986	-16	1	0
chr6:41742384\|41743343	hsa-miR-92a-1-5p	-10	1	0
chr6:41742384\|41743343	hsa-miR-4755-3p	-10	1	0
chr6:41742384\|41743343	hsa-miR-6760-5p	0	1	0
chr6:41742384\|41743343	hsa-miR-6810-5p	-15	1	0
chr6:41742384\|41743343	hsa-miR-30c-2-3p	0	1	0
chr6:41742384\|41743343	hsa-miR-450a-2-3p	-8	1	0
chr6:41742384\|41743343	hsa-miR-6758-3p	-11	1	0
chr6:41742384\|41743343	hsa-miR-6890-3p	-11	1	0
chr6:41742384\|41743343	hsa-miR-6754-5p	-16	1	0
chr6:41742384\|41743343	hsa-miR-6817-5p	-10	1	0
chr6:41742384\|41743343	hsa-miR-433-5p	-12	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:41742384\|41743343
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MQYGSGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAY
Nucleotide Sequence	CTGCAGTATGGCAGTGGCAGCCTCACCGGCTTCTTTGGCTATGACACCCTGACTGTCCAGAGCATCCAGGTCCCCAACCAGGAGTTCGGCTTGAGTGAGAATGAGCCTGGTACCAACTTCGTCTATGCGCAGTTTGATGGCATCATGGGCCTGGCCTAC

CircID	chr6:41742384\|41743343
ORF Type	ORF2
Protein Length	50
Nucleotide Length	150
Protein Sequence	MRIDEVGTRLILTQAELLVGDLDALDSQGVIAKEAGEAATAILQGEGLPI
Nucleotide Sequence	CTGCGCATAGACGAAGTTGGTACCAGGCTCATTCTCACTCAAGCCGAACTCCTGGTTGGGGACCTGGATGCTCTGGACAGTCAGGGTGTCATAGCCAAAGAAGCCGGTGAGGCTGCCACTGCCATACTGCAGGGAGAAGGTCTGCCCATT

CircID	chr6:41742384\|41743343
ORF Type	ORF3
Protein Length	25
Nucleotide Length	78
Protein Sequence	MVPGSFSLKPNSWLGTWMLWTVRVS
Nucleotide Sequence	TTGGTACCAGGCTCATTCTCACTCAAGCCGAACTCCTGGTTGGGGACCTGGATGCTCTGGACAGTCAGGGTGTCATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information