CircNet

General Information

circRNA Basic Information

CircID	chr6:42676783\|42683111
Strand	+
CircType	exon
Host Gene	ENSG00000024048.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAGAGAATGGCATGGATCAAGAAAATCCCCCTTGTGAAGAAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGGAAGTGCCTTGAAAGAAATACCATCCGGCTGGCATCTGTGGAGGAGTGTCAGAGCTGGAATCATGCCTTTCCTGAAGTGTTCTGCTTTATTTTTTCATTACTTAAATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGCCATTTTGAACATTTATGTAGCTATCTTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGATAATGAATTCACTGATTGAAAGTTGGTGCCGTAACAGTGAAGTTAAAAGATATCTAGAAGGTGAAAGAGATGCTATAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:42676783\|42683111	hsa-miR-92a-2-5p	0	1	1
chr6:42676783\|42683111	hsa-miR-136-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:42676783\|42683111
ORF Type	ORF1
Protein Length	125
Nucleotide Length	375
Protein Sequence	MDQENPPCEEESAVLALYKTLHQYTGSALKEIPSGWHLWRSVRAGIMPFLKCSALFFHYLNGVPSPPDIQVPGTSHFEHLCSYLSLPNNLICLFQENSEIMNSLIESWCRNSEVKRYLEGERDAI
Nucleotide Sequence	ATGGATCAAGAAAATCCCCCTTGTGAAGAAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGGAAGTGCCTTGAAAGAAATACCATCCGGCTGGCATCTGTGGAGGAGTGTCAGAGCTGGAATCATGCCTTTCCTGAAGTGTTCTGCTTTATTTTTTCATTACTTAAATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGCCATTTTGAACATTTATGTAGCTATCTTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGATAATGAATTCACTGATTGAAAGTTGGTGCCGTAACAGTGAAGTTAAAAGATATCTAGAAGGTGAAAGAGATGCTATA

CircID	chr6:42676783\|42683111
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MEFLPHPTFKFLEQAILNIYVAIFPYQTTSFAFFKKIVR*
Nucleotide Sequence	ATGGAGTTCCTTCCCCACCCGACATTCAAGTTCCTGGAACAAGCCATTTTGAACATTTATGTAGCTATCTTTCCCTACCAAACAACCTCATTTGCCTTTTTCAAGAAAATAGTGAGATAA

CircID	chr6:42676783\|42683111
ORF Type	ORF3
Protein Length	37
Nucleotide Length	111
Protein Sequence	MVFLSRHFPYTGEVFYTKQELLILLHKGDFLDPCHSL
Nucleotide Sequence	ATGGTATTTCTTTCAAGGCACTTCCCGTATACTGGTGAAGTGTTTTATACAAAGCAAGAACTGCTGATTCTTCTTCACAAGGGGGATTTTCTTGATCCATGCCATTCTCTT

CircID	chr6:42676783\|42683111
ORF Type	ORF4
Protein Length	31
Nucleotide Length	93
Protein Sequence	MAWIKKIPLVKKNQQFLLCIKHFTSIREVP*
Nucleotide Sequence	ATGGCATGGATCAAGAAAATCCCCCTTGTGAAGAAGAATCAGCAGTTCTTGCTTTGTATAAAACACTTCACCAGTATACGGGAAGTGCCTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:42676783\|42683111	U2AF2	26	1	2
chr6:42676783\|42683111	MOV10	1	0	0
chr6:42676783\|42683111	ELAVL1	10	2	1
chr6:42676783\|42683111	SF3B4	4	0	0
chr6:42676783\|42683111	YTHDF3	1	0	0
chr6:42676783\|42683111	PRPF8	1	0	2
chr6:42676783\|42683111	UPF1	2	1	0
chr6:42676783\|42683111	TNRC6A	1	0	0
chr6:42676783\|42683111	FMR1	6	0	2
chr6:42676783\|42683111	NUDT21	2	0	0
chr6:42676783\|42683111	TIA1	1	0	0
chr6:42676783\|42683111	FUS	0	1	0
chr6:42676783\|42683111	SRSF7	1	1	0
chr6:42676783\|42683111	SRSF1	2	1	2
chr6:42676783\|42683111	NOP58	4	2	5
chr6:42676783\|42683111	U2AF1	5	0	0
chr6:42676783\|42683111	KHSRP	0	0	2
chr6:42676783\|42683111	SRSF9	1	0	0
chr6:42676783\|42683111	NOP56	0	1	0
chr6:42676783\|42683111	DDX54	4	0	13
chr6:42676783\|42683111	EFTUD2	1	0	0
chr6:42676783\|42683111	RBM10	5	0	0
chr6:42676783\|42683111	SF3A3	3	0	1
chr6:42676783\|42683111	RBM22	0	1	0
chr6:42676783\|42683111	PTBP1	7	0	0
chr6:42676783\|42683111	HNRNPC	4	2	0
chr6:42676783\|42683111	HNRNPD	1	0	0
chr6:42676783\|42683111	TRA2A	3	0	2
chr6:42676783\|42683111	ZNF184	2	0	0
chr6:42676783\|42683111	DDX3X	1	0	0
chr6:42676783\|42683111	HNRNPA1	2	0	0
chr6:42676783\|42683111	FXR1	4	0	4
chr6:42676783\|42683111	FXR2	2	0	0
chr6:42676783\|42683111	IGF2BP1	10	0	5
chr6:42676783\|42683111	GTF2F1	1	0	0
chr6:42676783\|42683111	IGF2BP3	2	0	0
chr6:42676783\|42683111	IGF2BP2	4	2	1
chr6:42676783\|42683111	YTHDC1	1	0	0
chr6:42676783\|42683111	TAF15	2	0	0
chr6:42676783\|42683111	BUD13	1	0	2
chr6:42676783\|42683111	RBFOX2	2	0	0
chr6:42676783\|42683111	RBM47	1	0	2
chr6:42676783\|42683111	RTCB	1	0	0
chr6:42676783\|42683111	CSTF2T	2	0	4
chr6:42676783\|42683111	CSTF2	1	0	0
chr6:42676783\|42683111	RBM27	1	0	0
chr6:42676783\|42683111	CPSF7	2	0	0
chr6:42676783\|42683111	WDR33	0	0	1
chr6:42676783\|42683111	AGO2	2	0	2
chr6:42676783\|42683111	AGO1	1	0	0
chr6:42676783\|42683111	EIF4A3	5	1	3
chr6:42676783\|42683111	FBL	2	0	3

CircRNA Information