CircRNA Information

General Information
circRNA Basic Information
CircID chr6:43357320|43357503
Strand -
CircType exon
Host Gene ENSG00000171467.14;
Algorism CIRI2;
Sequence TTCGCTCCTCCTCTTCCTCTCGCTTTCGTCTGGCAAGATCCAGTTCTCGAAACTCAGGGTCGAGAAACCTAGGACTTGGGCTTCTTCTACGCTGTCGATAGTTGCGAGTTCCTGATGTAAAACTTGGGTGATCCCCTCCCATGCTGTTTATCTTCACTGTGTCATCATAACGGGGTCTTTTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:43357320|43357503 hsa-miR-146a-5p 0 0 1
chr6:43357320|43357503 hsa-miR-146a-3p 0 0 1
chr6:43357320|43357503 hsa-miR-425-5p 0 0 1
chr6:43357320|43357503 hsa-miR-425-3p 0 0 1
chr6:43357320|43357503 hsa-miR-504-5p 0 0 1
chr6:43357320|43357503 hsa-miR-504-3p 0 0 1
chr6:43357320|43357503 hsa-miR-551a 0 0 1
chr6:43357320|43357503 hsa-miR-551b-5p 0 0 1
chr6:43357320|43357503 hsa-miR-551b-3p 0 0 1
chr6:43357320|43357503 hsa-miR-577 0 0 1
chr6:43357320|43357503 hsa-miR-765 0 0 1
chr6:43357320|43357503 hsa-miR-873-5p 0 0 1
chr6:43357320|43357503 hsa-miR-873-3p 0 0 1
chr6:43357320|43357503 hsa-miR-1202 1 0 1
chr6:43357320|43357503 hsa-miR-1243 0 0 1
chr6:43357320|43357503 hsa-miR-1272 0 0 1
chr6:43357320|43357503 hsa-miR-1322 0 0 1
chr6:43357320|43357503 hsa-miR-516a-5p 0 0 1
chr6:43357320|43357503 hsa-miR-125a-5p 0 0 1
chr6:43357320|43357503 hsa-miR-146b-5p 0 1 1
chr6:43357320|43357503 hsa-miR-128 0 0 1
chr6:43357320|43357503 hsa-miR-125b 0 0 1
chr6:43357320|43357503 hsa-miR-499-3p 0 0 1
chr6:43357320|43357503 hsa-miR-638 1 0 0
chr6:43357320|43357503 hsa-miR-3125 0 1 0
chr6:43357320|43357503 hsa-miR-3138 1 0 0
chr6:43357320|43357503 hsa-miR-3153 1 0 0
chr6:43357320|43357503 hsa-miR-3916 0 1 0
chr6:43357320|43357503 hsa-miR-4462 1 0 0
chr6:43357320|43357503 hsa-miR-4682 0 1 0
chr6:43357320|43357503 hsa-miR-4739 1 0 0
chr6:43357320|43357503 hsa-miR-6088 1 0 0
chr6:43357320|43357503 hsa-miR-6165 1 0 0
chr6:43357320|43357503 hsa-miR-12115 1 0 0
chr6:43357320|43357503 hsa-miR-6746-5p 1 0 0
chr6:43357320|43357503 hsa-miR-3622b-5p 1 0 0
chr6:43357320|43357503 hsa-miR-3682-3p 1 1 0
chr6:43357320|43357503 hsa-miR-30b-3p 0 1 0
chr6:43357320|43357503 hsa-miR-5006-5p 1 0 0
chr6:43357320|43357503 hsa-miR-7109-5p 1 0 0
chr6:43357320|43357503 hsa-miR-1226-5p 1 0 0
chr6:43357320|43357503 hsa-miR-149-3p 1 0 0
chr6:43357320|43357503 hsa-miR-193a-5p 0 1 0
chr6:43357320|43357503 hsa-miR-28-5p 0 1 0
chr6:43357320|43357503 hsa-miR-1249-5p 1 0 0
chr6:43357320|43357503 hsa-miR-6779-5p 1 1 0
chr6:43357320|43357503 hsa-miR-6780a-5p 1 1 0
chr6:43357320|43357503 hsa-miR-7111-5p 1 0 0
chr6:43357320|43357503 hsa-miR-4728-5p 1 1 0
chr6:43357320|43357503 hsa-miR-642b-3p 1 0 0
chr6:43357320|43357503 hsa-miR-6758-5p 1 0 0
chr6:43357320|43357503 hsa-miR-6856-5p 1 0 0
chr6:43357320|43357503 hsa-miR-1914-3p 1 0 0
chr6:43357320|43357503 hsa-miR-3679-5p 1 1 0
chr6:43357320|43357503 hsa-miR-6859-5p 0 1 0
chr6:43357320|43357503 hsa-miR-6783-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:43357320|43357503
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MGGDHPSFTSGTRNYRQRRRSPSPRFLDPEFRELDLARRKREEEEER
Nucleotide Sequence ATGGGAGGGGATCACCCAAGTTTTACATCAGGAACTCGCAACTATCGACAGCGTAGAAGAAGCCCAAGTCCTAGGTTTCTCGACCCTGAGTTTCGAGAACTGGATCTTGCCAGACGAAAGCGAGAGGAAGAGGAGGAGCGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites