CircRNA Information

General Information
circRNA Basic Information
CircID chr6:43520392|43520774
Strand +
CircType exon
Host Gene ENSG00000171453.16;
Algorism CIRI2;
Sequence CTTGGACTTCCTGCACCTCAATAACACCAGGTGAGAAGCACCTGCTCAACTCCTCAGCTGCCTCCCCTTCCACGGGCTCAAGCAGGGTGATGTCTGGCAGGAGCCTGTAACTGGCTGTTGCCACTGGTGAAAACTTGGCATGATCTTTGCCAATGCCCTTGACACAGTGCATGAGCAGGTCAATTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:43520392|43520774 hsa-miR-21-5p 0 0 1
chr6:43520392|43520774 hsa-miR-21-3p 0 0 1
chr6:43520392|43520774 hsa-miR-192-5p 0 0 1
chr6:43520392|43520774 hsa-miR-192-3p 0 0 1
chr6:43520392|43520774 hsa-miR-197-5p 0 0 1
chr6:43520392|43520774 hsa-miR-197-3p 0 0 1
chr6:43520392|43520774 hsa-miR-10a-5p 0 0 1
chr6:43520392|43520774 hsa-miR-10a-3p 0 0 1
chr6:43520392|43520774 hsa-miR-10b-5p 0 0 1
chr6:43520392|43520774 hsa-miR-10b-3p 0 0 1
chr6:43520392|43520774 hsa-miR-182-5p 0 0 1
chr6:43520392|43520774 hsa-miR-182-3p 0 0 1
chr6:43520392|43520774 hsa-miR-215-5p 0 0 1
chr6:43520392|43520774 hsa-miR-215-3p 0 0 1
chr6:43520392|43520774 hsa-miR-146a-5p 0 0 1
chr6:43520392|43520774 hsa-miR-146a-3p 0 0 1
chr6:43520392|43520774 hsa-miR-384 0 0 1
chr6:43520392|43520774 hsa-miR-484 0 0 1
chr6:43520392|43520774 hsa-miR-496 0 0 1
chr6:43520392|43520774 hsa-miR-575 0 1 1
chr6:43520392|43520774 hsa-miR-589-5p 0 0 1
chr6:43520392|43520774 hsa-miR-589-3p 0 0 1
chr6:43520392|43520774 hsa-miR-592 0 1 1
chr6:43520392|43520774 hsa-miR-597-5p 0 0 1
chr6:43520392|43520774 hsa-miR-597-3p 0 0 1
chr6:43520392|43520774 hsa-miR-630 0 1 1
chr6:43520392|43520774 hsa-miR-631 0 0 1
chr6:43520392|43520774 hsa-miR-636 0 0 1
chr6:43520392|43520774 hsa-miR-650 1 1 1
chr6:43520392|43520774 hsa-miR-766-5p 0 0 1
chr6:43520392|43520774 hsa-miR-766-3p 0 0 1
chr6:43520392|43520774 hsa-miR-765 0 0 1
chr6:43520392|43520774 hsa-miR-892a 0 1 1
chr6:43520392|43520774 hsa-miR-935 0 1 1
chr6:43520392|43520774 hsa-miR-1226-5p 0 0 1
chr6:43520392|43520774 hsa-miR-1226-3p 0 0 1
chr6:43520392|43520774 hsa-miR-1229-5p 0 0 1
chr6:43520392|43520774 hsa-miR-1229-3p 0 0 1
chr6:43520392|43520774 hsa-miR-1236-5p 0 0 1
chr6:43520392|43520774 hsa-miR-1236-3p 0 0 1
chr6:43520392|43520774 hsa-miR-1286 0 0 1
chr6:43520392|43520774 hsa-miR-1256 0 0 1
chr6:43520392|43520774 hsa-miR-1827 0 0 1
chr6:43520392|43520774 hsa-miR-512-5p 0 1 1
chr6:43520392|43520774 hsa-miR-1225-3p 0 0 1
chr6:43520392|43520774 hsa-miR-486-3p 0 0 1
chr6:43520392|43520774 hsa-miR-296-3p 0 0 1
chr6:43520392|43520774 hsa-miR-1207-3p 0 0 1
chr6:43520392|43520774 hsa-miR-767-3p 0 0 1
chr6:43520392|43520774 hsa-miR-337-3p 0 1 1
chr6:43520392|43520774 hsa-miR-146b-5p 0 0 1
chr6:43520392|43520774 hsa-miR-590-5p 0 0 1
chr6:43520392|43520774 hsa-miR-1233 0 0 1
chr6:43520392|43520774 hsa-miR-550 0 0 1
chr6:43520392|43520774 hsa-miR-642 0 0 1
chr6:43520392|43520774 hsa-miR-218 0 0 1
chr6:43520392|43520774 hsa-miR-219-1-3p 0 0 1
chr6:43520392|43520774 hsa-miR-499-3p 0 0 1
chr6:43520392|43520774 hsa-miR-657 1 0 0
chr6:43520392|43520774 hsa-miR-764 0 1 0
chr6:43520392|43520774 hsa-miR-3141 1 0 0
chr6:43520392|43520774 hsa-miR-3154 1 0 0
chr6:43520392|43520774 hsa-miR-4297 0 1 0
chr6:43520392|43520774 hsa-miR-3612 0 1 0
chr6:43520392|43520774 hsa-miR-4438 0 1 0
chr6:43520392|43520774 hsa-miR-4440 1 0 0
chr6:43520392|43520774 hsa-miR-4471 0 1 0
chr6:43520392|43520774 hsa-miR-4656 1 0 0
chr6:43520392|43520774 hsa-miR-4657 1 0 0
chr6:43520392|43520774 hsa-miR-4688 1 1 0
chr6:43520392|43520774 hsa-miR-4706 1 0 0
chr6:43520392|43520774 hsa-miR-4739 1 0 0
chr6:43520392|43520774 hsa-miR-5194 0 1 0
chr6:43520392|43520774 hsa-miR-5572 0 1 0
chr6:43520392|43520774 hsa-miR-5698 1 0 0
chr6:43520392|43520774 hsa-miR-6133 1 0 0
chr6:43520392|43520774 hsa-miR-8059 0 1 0
chr6:43520392|43520774 hsa-miR-8089 1 0 0
chr6:43520392|43520774 hsa-miR-6734-5p 1 0 0
chr6:43520392|43520774 hsa-miR-671-5p 1 0 0
chr6:43520392|43520774 hsa-miR-7106-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6825-5p 1 1 0
chr6:43520392|43520774 hsa-miR-4687-3p 1 0 0
chr6:43520392|43520774 hsa-miR-6799-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6728-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6833-5p 1 0 0
chr6:43520392|43520774 hsa-miR-7114-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6807-5p 1 0 0
chr6:43520392|43520774 hsa-miR-3192-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6880-5p 1 0 0
chr6:43520392|43520774 hsa-miR-7847-3p 1 0 0
chr6:43520392|43520774 hsa-miR-4695-5p 1 0 0
chr6:43520392|43520774 hsa-miR-593-5p 1 0 0
chr6:43520392|43520774 hsa-miR-7160-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6875-3p 0 1 0
chr6:43520392|43520774 hsa-miR-4761-3p 0 1 0
chr6:43520392|43520774 hsa-miR-8069 1 0 0
chr6:43520392|43520774 hsa-miR-6787-3p 0 1 0
chr6:43520392|43520774 hsa-miR-6742-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6716-5p 1 0 0
chr6:43520392|43520774 hsa-miR-3151-5p 0 1 0
chr6:43520392|43520774 hsa-miR-877-3p 0 1 0
chr6:43520392|43520774 hsa-miR-6732-5p 1 0 0
chr6:43520392|43520774 hsa-miR-3190-3p 1 1 0
chr6:43520392|43520774 hsa-miR-6805-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6798-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6782-5p 1 0 0
chr6:43520392|43520774 hsa-miR-7855-5p 0 1 0
chr6:43520392|43520774 hsa-miR-204-3p 0 1 0
chr6:43520392|43520774 hsa-miR-2277-3p 1 0 0
chr6:43520392|43520774 hsa-miR-652-5p 0 1 0
chr6:43520392|43520774 hsa-miR-1228-5p 1 0 0
chr6:43520392|43520774 hsa-miR-3667-3p 1 0 0
chr6:43520392|43520774 hsa-miR-92b-5p 1 0 0
chr6:43520392|43520774 hsa-miR-877-5p 1 0 0
chr6:43520392|43520774 hsa-miR-642b-5p 0 1 0
chr6:43520392|43520774 hsa-miR-3202 0 1 0
chr6:43520392|43520774 hsa-miR-149-3p 1 0 0
chr6:43520392|43520774 hsa-miR-6824-5p 1 0 0
chr6:43520392|43520774 hsa-miR-194-3p 0 1 0
chr6:43520392|43520774 hsa-miR-4742-5p 0 1 0
chr6:43520392|43520774 hsa-miR-4778-3p 0 1 0
chr6:43520392|43520774 hsa-miR-3620-3p 0 1 0
chr6:43520392|43520774 hsa-miR-6732-3p 0 1 0
chr6:43520392|43520774 hsa-miR-1207-5p 1 0 0
chr6:43520392|43520774 hsa-miR-1233-5p 1 0 0
chr6:43520392|43520774 hsa-miR-4763-3p 1 0 0
chr6:43520392|43520774 hsa-miR-6778-5p 1 1 0
chr6:43520392|43520774 hsa-miR-6787-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6870-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6893-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6775-5p 1 0 0
chr6:43520392|43520774 hsa-miR-1343-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6726-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6756-5p 1 0 0
chr6:43520392|43520774 hsa-miR-11181-3p 1 0 0
chr6:43520392|43520774 hsa-miR-1249-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6763-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6779-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6780a-5p 1 1 0
chr6:43520392|43520774 hsa-miR-6797-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6879-5p 1 0 0
chr6:43520392|43520774 hsa-miR-7111-5p 1 0 0
chr6:43520392|43520774 hsa-miR-4728-5p 1 1 0
chr6:43520392|43520774 hsa-miR-5196-5p 1 1 0
chr6:43520392|43520774 hsa-miR-6780b-5p 1 0 0
chr6:43520392|43520774 hsa-miR-328-5p 1 1 0
chr6:43520392|43520774 hsa-miR-4632-5p 1 0 0
chr6:43520392|43520774 hsa-miR-4745-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6729-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6777-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6794-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6795-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6846-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6848-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6858-5p 1 1 0
chr6:43520392|43520774 hsa-miR-6883-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6887-5p 1 0 0
chr6:43520392|43520774 hsa-miR-4723-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6831-5p 0 1 0
chr6:43520392|43520774 hsa-miR-939-5p 1 0 0
chr6:43520392|43520774 hsa-miR-4769-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6511a-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6773-5p 1 0 0
chr6:43520392|43520774 hsa-miR-4700-5p 0 1 0
chr6:43520392|43520774 hsa-miR-4646-5p 1 1 0
chr6:43520392|43520774 hsa-miR-4747-5p 0 1 0
chr6:43520392|43520774 hsa-miR-6750-5p 0 1 0
chr6:43520392|43520774 hsa-miR-6785-5p 1 0 0
chr6:43520392|43520774 hsa-miR-6724-5p 1 1 0
chr6:43520392|43520774 hsa-miR-6822-5p 0 1 0
chr6:43520392|43520774 hsa-miR-4722-3p 1 1 0
chr6:43520392|43520774 hsa-miR-3059-5p 0 1 0
chr6:43520392|43520774 hsa-miR-5581-5p 0 1 0
chr6:43520392|43520774 hsa-miR-664a-5p 0 1 0
chr6:43520392|43520774 hsa-miR-34c-5p 0 1 0
chr6:43520392|43520774 hsa-miR-499a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:43520392|43520774
ORF Type ORF1
Protein Length 45
Nucleotide Length 138
Protein Sequence MTCSCTVSRALAKIMPSFHQWQQPVTGSCQTSPCLSPWKGRQLRS
Nucleotide Sequence TTGACCTGCTCATGCACTGTGTCAAGGGCATTGGCAAAGATCATGCCAAGTTTTCACCAGTGGCAACAGCCAGTTACAGGCTCCTGCCAGACATCACCCTGCTTGAGCCCGTGGAAGGGGAGGCAGCTGAGGAGTTGA
CircID chr6:43520392|43520774
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MCQGHWQRSCQVFTSGNSQLQAPARHHPA
Nucleotide Sequence CTGTGTCAAGGGCATTGGCAAAGATCATGCCAAGTTTTCACCAGTGGCAACAGCCAGTTACAGGCTCCTGCCAGACATCACCCTGCTTGA
CircID chr6:43520392|43520774
ORF Type ORF3
Protein Length 59
Nucleotide Length 177
Protein Sequence MLMHCVKGIGKDHAKFSPVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQ
Nucleotide Sequence CTGCTCATGCACTGTGTCAAGGGCATTGGCAAAGATCATGCCAAGTTTTCACCAGTGGCAACAGCCAGTTACAGGCTCCTGCCAGACATCACCCTGCTTGAGCCCGTGGAAGGGGAGGCAGCTGAGGAGTTGAGCAGGTGCTTCTCACCTGGTGTTATTGAGGTGCAGGAAGTCCAA
CircID chr6:43520392|43520774
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MAGACNWLLPLVKTWHDLCLERKRERAYRKPF
Nucleotide Sequence CTGGCAGGAGCCTGTAACTGGCTGTTGCCACTGGTGAAAACTTGGCATGATCTTTGCCTGGAGAGGAAGAGGGAACGTGCCTATAGGAAACCCTTCTAG
CircID chr6:43520392|43520774
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MAFYLPGMSQLSSLVSLPHCNRTIPLPRKAHRVLTNALDTVHEQVN
Nucleotide Sequence TTGGCTTTCTACCTGCCGGGAATGTCTCAGCTGAGTTCCCTAGTCAGCTTGCCCCACTGCAACCGAACTATCCCCCTTCCCAGGAAGGCACACAGGGTTCTCACCAATGCCCTTGACACAGTGCATGAGCAGGTCAAT
CircID chr6:43520392|43520774
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MIFAWRGRGNVPIGNPSRVRKNTPPKLLTAKAQPSWLSTCRECLS
Nucleotide Sequence ATGATCTTTGCCTGGAGAGGAAGAGGGAACGTGCCTATAGGAAACCCTTCTAGGGTTAGGAAGAATACTCCTCCTAAGCTACTAACAGCAAAAGCACAACCCTCTTGGCTTTCTACCTGCCGGGAATGTCTCAGCTGA
CircID chr6:43520392|43520774
ORF Type ORF4
Protein Length 36
Nucleotide Length 111
Protein Sequence MTCSCTVSRALVRTLCAFLGRGIVRLQWGKLTRELS
Nucleotide Sequence TTGACCTGCTCATGCACTGTGTCAAGGGCATTGGTGAGAACCCTGTGTGCCTTCCTGGGAAGGGGGATAGTTCGGTTGCAGTGGGGCAAGCTGACTAGGGAACTCAGCTGA
CircID chr6:43520392|43520774
ORF Type ORF5
Protein Length 33
Nucleotide Length 99
Protein Sequence MPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQ
Nucleotide Sequence CTGCCAGACATCACCCTGCTTGAGCCCGTGGAAGGGGAGGCAGCTGAGGAGTTGAGCAGGTGCTTCTCACCTGGTGTTATTGAGGTGCAGGAAGTCCAA
CircID chr6:43520392|43520774
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MLMHCVKGIGENPVCLPGKGDSSVAVGQAD
Nucleotide Sequence CTGCTCATGCACTGTGTCAAGGGCATTGGTGAGAACCCTGTGTGCCTTCCTGGGAAGGGGGATAGTTCGGTTGCAGTGGGGCAAGCTGACTAG
CircID chr6:43520392|43520774
ORF Type ORF7
Protein Length 75
Nucleotide Length 228
Protein Sequence MRHSRQVESQEGCAFAVSSLGGVFFLTLEGFPIGTFPLPLQAKIMPSFHQWQQPVTGSCQTSPCLSPWKGRQLRS
Nucleotide Sequence CTGAGACATTCCCGGCAGGTAGAAAGCCAAGAGGGTTGTGCTTTTGCTGTTAGTAGCTTAGGAGGAGTATTCTTCCTAACCCTAGAAGGGTTTCCTATAGGCACGTTCCCTCTTCCTCTCCAGGCAAAGATCATGCCAAGTTTTCACCAGTGGCAACAGCCAGTTACAGGCTCCTGCCAGACATCACCCTGCTTGAGCCCGTGGAAGGGGAGGCAGCTGAGGAGTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab