CircNet

General Information

circRNA Basic Information

CircID	chr6:43527634\|43534007
Strand	-
CircType	exon
Host Gene	ENSG00000124571.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	AACCCACAATACATTATATGCACCAGAAATGCTAGCCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCTTGACGCGGAAAAATCTGCTATATTAGGATTACCTCAACCTCTCTTGGAACTCAATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTACCCTCTATGAAAACTGTGGAGAAGATGAGGCTGCAGATGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAGCAACTGGTGAGGATGTTAACCCGAGAAGTCATGGACCTAATCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:43527634\|43534007
ORF Type	ORF1
Protein Length	89
Nucleotide Length	267
Protein Sequence	MLAKMAEPFTKALDMLDAEKSAILGLPQPLLELNDSPVFKTVLERMQRFFSTLYENCGEDEAADENPESQEMLEEQLVRMLTREVMDLI
Nucleotide Sequence	ATGCTAGCCAAAATGGCAGAGCCTTTCACCAAGGCTCTGGATATGCTTGACGCGGAAAAATCTGCTATATTAGGATTACCTCAACCTCTCTTGGAACTCAATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTACCCTCTATGAAAACTGTGGAGAAGATGAGGCTGCAGATGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAGCAACTGGTGAGGATGTTAACCCGAGAAGTCATGGACCTAATC

CircID	chr6:43527634\|43534007
ORF Type	ORF2
Protein Length	45
Nucleotide Length	135
Protein Sequence	MTLLSSKPSWKECSVSSLPSMKTVEKMRLQMKTQSLKRCWRSNW*
Nucleotide Sequence	ATGACTCTCCTGTCTTCAAAACCGTCTTGGAAAGAATGCAGCGTTTCTTCTCTACCCTCTATGAAAACTGTGGAGAAGATGAGGCTGCAGATGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAGCAACTGGTGA

CircID	chr6:43527634\|43534007
ORF Type	ORF3
Protein Length	51
Nucleotide Length	153
Protein Sequence	LLLQHLLRLWVFICSLIFSTVFIEGREETLHSFQDGFEDRRVIEFQERLR*
Nucleotide Sequence	TTGCTCCTCCAGCATCTCTTGAGACTCTGGGTTTTCATCTGCAGCCTCATCTTCTCCACAGTTTTCATAGAGGGTAGAGAAGAAACGCTGCATTCTTTCCAAGACGGTTTTGAAGACAGGAGAGTCATTGAGTTCCAAGAGAGGTTGAGGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:43527634\|43534007	AGGF1	1	0	0
chr6:43527634\|43534007	NOP56	0	4	2
chr6:43527634\|43534007	MOV10	6	0	0
chr6:43527634\|43534007	ELAVL1	4	7	1
chr6:43527634\|43534007	DHX9	1	0	0
chr6:43527634\|43534007	SF3B4	2	2	0
chr6:43527634\|43534007	FAM120A	0	1	0
chr6:43527634\|43534007	CELF2	0	1	0
chr6:43527634\|43534007	SRRM4	1	0	0
chr6:43527634\|43534007	PRPF8	8	5	3
chr6:43527634\|43534007	UPF1	1	0	0
chr6:43527634\|43534007	TAF15	5	0	0
chr6:43527634\|43534007	CAPRIN1	0	1	0
chr6:43527634\|43534007	FMR1	1	2	2
chr6:43527634\|43534007	CPSF6	0	1	1
chr6:43527634\|43534007	NUDT21	0	1	0
chr6:43527634\|43534007	CNBP	0	1	0
chr6:43527634\|43534007	CPSF1	0	1	0
chr6:43527634\|43534007	FUS	1	0	0
chr6:43527634\|43534007	DGCR8	3	3	0
chr6:43527634\|43534007	SRSF7	0	0	2
chr6:43527634\|43534007	SRSF1	3	8	6
chr6:43527634\|43534007	NOP58	3	4	3
chr6:43527634\|43534007	SRSF3	1	0	0
chr6:43527634\|43534007	U2AF1	4	6	2
chr6:43527634\|43534007	U2AF2	17	28	4
chr6:43527634\|43534007	SRSF9	0	3	3
chr6:43527634\|43534007	HNRNPU	0	1	0
chr6:43527634\|43534007	DDX54	0	2	7
chr6:43527634\|43534007	LSM11	0	2	0
chr6:43527634\|43534007	EFTUD2	2	0	0
chr6:43527634\|43534007	ELAVL3	0	1	0
chr6:43527634\|43534007	GRWD1	1	0	1
chr6:43527634\|43534007	RBM10	7	7	0
chr6:43527634\|43534007	HNRNPA2B1	0	5	1
chr6:43527634\|43534007	SF3A3	4	3	0
chr6:43527634\|43534007	PTBP1	16	14	2
chr6:43527634\|43534007	HNRNPC	2	15	1
chr6:43527634\|43534007	TRA2A	0	8	3
chr6:43527634\|43534007	HNRNPM	0	2	0
chr6:43527634\|43534007	ZNF184	0	0	1
chr6:43527634\|43534007	RBFOX2	1	1	0
chr6:43527634\|43534007	HNRNPUL1	0	1	0
chr6:43527634\|43534007	SMNDC1	0	5	0
chr6:43527634\|43534007	AUH	0	2	0
chr6:43527634\|43534007	HNRNPA1	0	8	0
chr6:43527634\|43534007	LIN28B	5	2	1
chr6:43527634\|43534007	RANGAP1	0	0	1
chr6:43527634\|43534007	FXR1	0	1	3
chr6:43527634\|43534007	BCCIP	0	1	3
chr6:43527634\|43534007	NUMA1	0	2	0
chr6:43527634\|43534007	SND1	0	0	1
chr6:43527634\|43534007	IGF2BP1	0	1	4
chr6:43527634\|43534007	GTF2F1	0	1	0
chr6:43527634\|43534007	IGF2BP3	0	0	2
chr6:43527634\|43534007	IGF2BP2	1	3	3
chr6:43527634\|43534007	NPM1	0	1	1
chr6:43527634\|43534007	FTO	0	1	0
chr6:43527634\|43534007	TARDBP	2	1	2
chr6:43527634\|43534007	YTHDC1	1	0	0
chr6:43527634\|43534007	BUD13	2	3	3
chr6:43527634\|43534007	KHSRP	1	0	0
chr6:43527634\|43534007	DDX24	1	0	0
chr6:43527634\|43534007	CSTF2T	0	0	1
chr6:43527634\|43534007	FXR2	0	1	1
chr6:43527634\|43534007	TIA1	0	1	0
chr6:43527634\|43534007	RBM22	0	2	0
chr6:43527634\|43534007	HNRNPK	0	1	0
chr6:43527634\|43534007	ACIN1	0	1	0
chr6:43527634\|43534007	AGO2	0	2	2
chr6:43527634\|43534007	EIF4A3	5	13	6
chr6:43527634\|43534007	FBL	2	3	1

CircRNA Information