CircRNA Information

General Information
circRNA Basic Information
CircID chr6:43785101|43785267
Strand +
CircType exon
Host Gene ENSG00000112715.19;
Algorism CIRI2;
Sequence CTGGGGTAGAGAGGCTCAGCGCCAGGGCTGGGTTTGTCGGTGTTCCCAAAACTGGGTCATATTTGCCCCCATGCCCTGGCCTTGCACATTCCTGGGCAGGGGAGAGGACCCTGGCCCCACCAAGTGGGACAAAAAAAAGATCATGCCAGAGTCTCTCATCTCCTCCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:43785101|43785267 hsa-miR-19a-5p 0 0 1
chr6:43785101|43785267 hsa-miR-19a-3p 0 0 1
chr6:43785101|43785267 hsa-miR-143-5p 0 0 1
chr6:43785101|43785267 hsa-miR-143-3p 0 0 1
chr6:43785101|43785267 hsa-miR-206 0 1 1
chr6:43785101|43785267 hsa-miR-613 0 0 1
chr6:43785101|43785267 hsa-miR-765 0 1 1
chr6:43785101|43785267 hsa-miR-541-5p 0 0 1
chr6:43785101|43785267 hsa-miR-541-3p 0 0 1
chr6:43785101|43785267 hsa-miR-1292-5p 0 0 1
chr6:43785101|43785267 hsa-miR-1292-3p 0 0 1
chr6:43785101|43785267 hsa-miR-129-5p 0 0 1
chr6:43785101|43785267 hsa-miR-654-5p 0 0 1
chr6:43785101|43785267 hsa-miR-331-3p 0 0 1
chr6:43785101|43785267 hsa-miR-19b 0 0 1
chr6:43785101|43785267 hsa-miR-1 0 0 1
chr6:43785101|43785267 hsa-miR-760 1 0 0
chr6:43785101|43785267 hsa-miR-1273c 0 1 0
chr6:43785101|43785267 hsa-miR-4784 0 1 0
chr6:43785101|43785267 hsa-miR-6069 0 1 0
chr6:43785101|43785267 hsa-miR-6840-3p 1 1 0
chr6:43785101|43785267 hsa-miR-1247-3p 0 1 0
chr6:43785101|43785267 hsa-miR-1227-5p 0 1 0
chr6:43785101|43785267 hsa-miR-6757-5p 0 1 0
chr6:43785101|43785267 hsa-miR-3622b-5p 0 1 0
chr6:43785101|43785267 hsa-miR-3151-5p 0 1 0
chr6:43785101|43785267 hsa-miR-3150b-3p 0 1 0
chr6:43785101|43785267 hsa-miR-6888-5p 0 1 0
chr6:43785101|43785267 hsa-miR-5006-5p 1 0 0
chr6:43785101|43785267 hsa-miR-6740-3p 0 1 0
chr6:43785101|43785267 hsa-miR-4786-3p 1 0 0
chr6:43785101|43785267 hsa-miR-4640-5p 0 1 0
chr6:43785101|43785267 hsa-miR-7111-3p 0 1 0
chr6:43785101|43785267 hsa-miR-887-5p 0 1 0
chr6:43785101|43785267 hsa-miR-3922-5p 0 1 0
chr6:43785101|43785267 hsa-miR-4712-3p 0 1 0
chr6:43785101|43785267 hsa-miR-1233-5p 1 0 0
chr6:43785101|43785267 hsa-miR-6870-5p 0 1 0
chr6:43785101|43785267 hsa-miR-6775-5p 1 1 0
chr6:43785101|43785267 hsa-miR-6862-5p 0 1 0
chr6:43785101|43785267 hsa-miR-328-5p 1 0 0
chr6:43785101|43785267 hsa-miR-4685-5p 0 1 0
chr6:43785101|43785267 hsa-miR-6885-5p 1 0 0
chr6:43785101|43785267 hsa-miR-6837-5p 0 1 0
chr6:43785101|43785267 hsa-miR-6751-3p 0 1 0
chr6:43785101|43785267 hsa-miR-6769b-3p 0 1 0
chr6:43785101|43785267 hsa-miR-6819-3p 0 1 0
chr6:43785101|43785267 hsa-miR-6823-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:43785101|43785267
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MGLSVFPKLGHICPHALALHIPGQGRGPWPHQVGQKKDHARVSHLL
Nucleotide Sequence CTGGGTTTGTCGGTGTTCCCAAAACTGGGTCATATTTGCCCCCATGCCCTGGCCTTGCACATTCCTGGGCAGGGGAGAGGACCCTGGCCCCACCAAGTGGGACAAAAAAAAGATCATGCCAGAGTCTCTCATCTCCTC

CircID chr6:43785101|43785267
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MPWPCTFLGRGEDPGPTKWDKKKIMPESLISS
Nucleotide Sequence ATGCCCTGGCCTTGCACATTCCTGGGCAGGGGAGAGGACCCTGGCCCCACCAAGTGGGACAAAAAAAAGATCATGCCAGAGTCTCTCATCTCCTCC

CircID chr6:43785101|43785267
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MPPCPGLAHSWAGERTLAPPSGTKKRSCQSLSSPP
Nucleotide Sequence TTGCCCCCATGCCCTGGCCTTGCACATTCCTGGGCAGGGGAGAGGACCCTGGCCCCACCAAGTGGGACAAAAAAAAGATCATGCCAGAGTCTCTCATCTCCTCCT

CircID chr6:43785101|43785267
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MRDSGMIFFLSHLVGPGSSPLPRNVQGQGMGANMTQFWEHRQTQPWR
Nucleotide Sequence ATGAGAGACTCTGGCATGATCTTTTTTTTGTCCCACTTGGTGGGGCCAGGGTCCTCTCCCCTGCCCAGGAATGTGCAAGGCCAGGGCATGGGGGCAAATATGACCCAGTTTTGGGAACACCGACAAACCCAGCCCTGGCGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites