CircRNA Information

General Information
circRNA Basic Information
CircID chr6:44003416|44003680
Strand +
CircType exon
Host Gene ENSG00000237686.5;
Algorism CIRI2;
Sequence CTCACTCCTCACCAGCTCCCCTATGGCGGCCACAGCTGGCCAGCAGGCGGGGCCTCCGTGTCTGTGGCGGGGATGTCACCTTTCTTCGCAGGAAGGTAATTTCCCCGCCAGGGGAGGGAGTCCGTCGTGCTGCTCATAAAGCCACTGTTAAACGAGCGGGTCTGGGAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTCAAGTGCCAAACGGGGGTACTGCTGCCCTGCGTGCCTTTGCCACTCCTCCCACTGAAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:44003416|44003680 hsa-miR-15a-5p 0 0 1
chr6:44003416|44003680 hsa-miR-15a-3p 0 0 1
chr6:44003416|44003680 hsa-miR-96-5p 0 0 1
chr6:44003416|44003680 hsa-miR-96-3p 0 0 1
chr6:44003416|44003680 hsa-miR-182-5p 0 0 1
chr6:44003416|44003680 hsa-miR-182-3p 0 0 1
chr6:44003416|44003680 hsa-miR-212-5p 0 0 1
chr6:44003416|44003680 hsa-miR-212-3p 0 0 1
chr6:44003416|44003680 hsa-miR-15b-5p 0 0 1
chr6:44003416|44003680 hsa-miR-15b-3p 0 0 1
chr6:44003416|44003680 hsa-miR-132-5p 0 0 1
chr6:44003416|44003680 hsa-miR-132-3p 0 0 1
chr6:44003416|44003680 hsa-miR-195-5p 0 0 1
chr6:44003416|44003680 hsa-miR-195-3p 0 0 1
chr6:44003416|44003680 hsa-miR-370-5p 0 0 1
chr6:44003416|44003680 hsa-miR-370-3p 0 0 1
chr6:44003416|44003680 hsa-miR-424-5p 0 0 1
chr6:44003416|44003680 hsa-miR-424-3p 0 0 1
chr6:44003416|44003680 hsa-miR-489-5p 0 0 1
chr6:44003416|44003680 hsa-miR-489-3p 0 0 1
chr6:44003416|44003680 hsa-miR-497-5p 0 0 1
chr6:44003416|44003680 hsa-miR-497-3p 0 0 1
chr6:44003416|44003680 hsa-miR-506-5p 0 0 1
chr6:44003416|44003680 hsa-miR-506-3p 0 0 1
chr6:44003416|44003680 hsa-miR-564 0 0 1
chr6:44003416|44003680 hsa-miR-1271-5p 0 0 1
chr6:44003416|44003680 hsa-miR-1271-3p 0 0 1
chr6:44003416|44003680 hsa-miR-765 0 1 1
chr6:44003416|44003680 hsa-miR-920 0 1 1
chr6:44003416|44003680 hsa-miR-939-5p 0 0 1
chr6:44003416|44003680 hsa-miR-939-3p 0 0 1
chr6:44003416|44003680 hsa-miR-663b 0 0 1
chr6:44003416|44003680 hsa-miR-1304-5p 0 0 1
chr6:44003416|44003680 hsa-miR-1304-3p 0 0 1
chr6:44003416|44003680 hsa-miR-1827 0 0 1
chr6:44003416|44003680 hsa-miR-331-3p 0 0 1
chr6:44003416|44003680 hsa-miR-556-5p 0 0 1
chr6:44003416|44003680 hsa-miR-16 0 0 1
chr6:44003416|44003680 hsa-miR-138 0 0 1
chr6:44003416|44003680 hsa-miR-124 0 0 1
chr6:44003416|44003680 hsa-miR-663 0 0 1
chr6:44003416|44003680 hsa-miR-572 1 0 0
chr6:44003416|44003680 hsa-miR-608 1 0 0
chr6:44003416|44003680 hsa-miR-658 1 0 0
chr6:44003416|44003680 hsa-miR-298 1 0 0
chr6:44003416|44003680 hsa-miR-1202 1 0 0
chr6:44003416|44003680 hsa-miR-1291 0 1 0
chr6:44003416|44003680 hsa-miR-3147 1 0 0
chr6:44003416|44003680 hsa-miR-3154 0 1 0
chr6:44003416|44003680 hsa-miR-4300 0 1 0
chr6:44003416|44003680 hsa-miR-4260 1 1 0
chr6:44003416|44003680 hsa-miR-3714 1 1 0
chr6:44003416|44003680 hsa-miR-4462 0 1 0
chr6:44003416|44003680 hsa-miR-3689c 0 1 0
chr6:44003416|44003680 hsa-miR-4487 0 1 0
chr6:44003416|44003680 hsa-miR-4516 0 1 0
chr6:44003416|44003680 hsa-miR-4688 1 0 0
chr6:44003416|44003680 hsa-miR-4739 1 1 0
chr6:44003416|44003680 hsa-miR-5698 1 0 0
chr6:44003416|44003680 hsa-miR-5703 0 1 0
chr6:44003416|44003680 hsa-miR-6069 1 0 0
chr6:44003416|44003680 hsa-miR-6081 1 0 0
chr6:44003416|44003680 hsa-miR-7515 0 1 0
chr6:44003416|44003680 hsa-miR-12115 1 0 0
chr6:44003416|44003680 hsa-miR-12120 1 1 0
chr6:44003416|44003680 hsa-miR-4433b-3p 0 1 0
chr6:44003416|44003680 hsa-miR-6765-5p 1 0 0
chr6:44003416|44003680 hsa-miR-7106-5p 0 1 0
chr6:44003416|44003680 hsa-miR-6799-5p 1 0 0
chr6:44003416|44003680 hsa-miR-3692-5p 0 1 0
chr6:44003416|44003680 hsa-miR-3622a-5p 0 1 0
chr6:44003416|44003680 hsa-miR-3192-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6730-5p 0 1 0
chr6:44003416|44003680 hsa-miR-7108-5p 1 1 0
chr6:44003416|44003680 hsa-miR-6798-5p 1 0 0
chr6:44003416|44003680 hsa-miR-2467-3p 1 0 0
chr6:44003416|44003680 hsa-miR-7855-5p 0 1 0
chr6:44003416|44003680 hsa-miR-6786-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6740-5p 1 0 0
chr6:44003416|44003680 hsa-miR-3614-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6824-5p 1 1 0
chr6:44003416|44003680 hsa-miR-7112-5p 1 0 0
chr6:44003416|44003680 hsa-miR-3190-5p 0 1 0
chr6:44003416|44003680 hsa-miR-4758-3p 0 1 0
chr6:44003416|44003680 hsa-miR-4727-3p 1 1 0
chr6:44003416|44003680 hsa-miR-3940-3p 1 0 0
chr6:44003416|44003680 hsa-miR-16-5p 0 1 0
chr6:44003416|44003680 hsa-miR-124-3p 0 1 0
chr6:44003416|44003680 hsa-miR-1207-5p 1 0 0
chr6:44003416|44003680 hsa-miR-1233-5p 1 1 0
chr6:44003416|44003680 hsa-miR-1273h-5p 1 0 0
chr6:44003416|44003680 hsa-miR-3689b-3p 0 1 0
chr6:44003416|44003680 hsa-miR-4763-3p 1 0 0
chr6:44003416|44003680 hsa-miR-6769b-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6778-5p 1 1 0
chr6:44003416|44003680 hsa-miR-6812-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6870-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6775-5p 1 1 0
chr6:44003416|44003680 hsa-miR-1343-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6726-5p 0 1 0
chr6:44003416|44003680 hsa-miR-6756-5p 1 0 0
chr6:44003416|44003680 hsa-miR-1249-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6779-5p 1 1 0
chr6:44003416|44003680 hsa-miR-4728-5p 1 1 0
chr6:44003416|44003680 hsa-miR-5196-5p 1 1 0
chr6:44003416|44003680 hsa-miR-6780b-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6836-5p 1 0 0
chr6:44003416|44003680 hsa-miR-1909-3p 1 0 0
chr6:44003416|44003680 hsa-miR-328-5p 1 0 0
chr6:44003416|44003680 hsa-miR-3689a-3p 0 1 0
chr6:44003416|44003680 hsa-miR-4632-5p 1 1 0
chr6:44003416|44003680 hsa-miR-6794-5p 1 0 0
chr6:44003416|44003680 hsa-miR-6883-5p 1 0 0
chr6:44003416|44003680 hsa-miR-3187-5p 1 0 0
chr6:44003416|44003680 hsa-miR-4723-5p 1 0 0
chr6:44003416|44003680 hsa-miR-4758-5p 1 0 0
chr6:44003416|44003680 hsa-miR-4665-5p 1 0 0
chr6:44003416|44003680 hsa-miR-4747-5p 0 1 0
chr6:44003416|44003680 hsa-miR-6893-3p 0 1 0
chr6:44003416|44003680 hsa-miR-10392-3p 1 0 0
chr6:44003416|44003680 hsa-miR-6817-5p 1 1 0
chr6:44003416|44003680 hsa-miR-6797-3p 0 1 0
chr6:44003416|44003680 hsa-miR-6838-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:44003416|44003680
ORF Type ORF1
Protein Length 45
Nucleotide Length 135
Protein Sequence MLIKPLLNERVWEFWLGGLPFPSPCLKCQTGVLLPCVPLPLLPLK
Nucleotide Sequence CTGCTCATAAAGCCACTGTTAAACGAGCGGGTCTGGGAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTCAAGTGCCAAACGGGGGTACTGCTGCCCTGCGTGCCTTTGCCACTCCTCCCACTGAAG
CircID chr6:44003416|44003680
ORF Type ORF2
Protein Length 38
Nucleotide Length 117
Protein Sequence MAATAGQQAGPPCLWRGCHLSSQEGNFPARGGSPSCCS
Nucleotide Sequence ATGGCGGCCACAGCTGGCCAGCAGGCGGGGCCTCCGTGTCTGTGGCGGGGATGTCACCTTTCTTCGCAGGAAGGTAATTTCCCCGCCAGGGGAGGGAGTCCGTCGTGCTGCTCATAA
CircID chr6:44003416|44003680
ORF Type ORF3
Protein Length 76
Nucleotide Length 228
Protein Sequence MASRRGLRVCGGDVTFLRRKVISPPGEGVRRAAHKATVKRAGLGVLAGRTSLPFSVPQVPNGGTAALRAFATPPTE
Nucleotide Sequence CTGGCCAGCAGGCGGGGCCTCCGTGTCTGTGGCGGGGATGTCACCTTTCTTCGCAGGAAGGTAATTTCCCCGCCAGGGGAGGGAGTCCGTCGTGCTGCTCATAAAGCCACTGTTAAACGAGCGGGTCTGGGAGTTCTGGCTGGGCGGACTTCCCTTCCCTTCTCCGTGCCTCAAGTGCCAAACGGGGGTACTGCTGCCCTGCGTGCCTTTGCCACTCCTCCCACTGAA
CircID chr6:44003416|44003680
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MRRKVTSPPQTRRPRLLASCGRHRGAGEE
Nucleotide Sequence CTGCGAAGAAAGGTGACATCCCCGCCACAGACACGGAGGCCCCGCCTGCTGGCCAGCTGTGGCCGCCATAGGGGAGCTGGTGAGGAGTGA
CircID chr6:44003416|44003680
ORF Type ORF5
Protein Length 62
Nucleotide Length 189
Protein Sequence MRHGEGKGSPPSQNSQTRSFNSGFMSSTTDSLPWRGNYLPAKKGDIPATDTEAPPAGQLWPP
Nucleotide Sequence TTGAGGCACGGAGAAGGGAAGGGAAGTCCGCCCAGCCAGAACTCCCAGACCCGCTCGTTTAACAGTGGCTTTATGAGCAGCACGACGGACTCCCTCCCCTGGCGGGGAAATTACCTTCCTGCGAAGAAAGGTGACATCCCCGCCACAGACACGGAGGCCCCGCCTGCTGGCCAGCTGTGGCCGCCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab