CircRNA Information

General Information
circRNA Basic Information
CircID chr6:44250330|44250541
Strand +
CircType exon
Host Gene ENSG00000096384.18;
Algorism CIRI2;
Sequence TCCTCTTGGGTGATGTCATCAGGGTTTCTGGTCCAAATAGGCTTGGTCTTGTTTAGTTCTTCCTGATCAATGTATTTCTCTTTGATCTTCTTAGTTTTCTTCTTCTTATCCTTACCGCTGTCATCCTCCTCATCTGAACCCACATCTTCGATCTTGGGTTTTTCTTCATCATCTTTATCTTCCTCTTCTTTCTCACCTTTCTCTTCCTCTGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:44250330|44250541 hsa-miR-383-5p 0 0 1
chr6:44250330|44250541 hsa-miR-383-3p 0 0 1
chr6:44250330|44250541 hsa-miR-489-5p 0 0 1
chr6:44250330|44250541 hsa-miR-489-3p 0 0 1
chr6:44250330|44250541 hsa-miR-539-5p 0 0 1
chr6:44250330|44250541 hsa-miR-539-3p 0 0 1
chr6:44250330|44250541 hsa-miR-577 0 0 1
chr6:44250330|44250541 hsa-miR-873-5p 0 0 1
chr6:44250330|44250541 hsa-miR-873-3p 0 0 1
chr6:44250330|44250541 hsa-miR-1272 0 0 1
chr6:44250330|44250541 hsa-miR-299-3p 0 0 1
chr6:44250330|44250541 hsa-miR-576-3p 0 0 1
chr6:44250330|44250541 hsa-miR-548d-3p 0 0 1
chr6:44250330|44250541 hsa-miR-1826 0 0 1
chr6:44250330|44250541 hsa-miR-499-3p 0 0 1
chr6:44250330|44250541 hsa-miR-583 1 0 0
chr6:44250330|44250541 hsa-miR-765 1 1 0
chr6:44250330|44250541 hsa-miR-1255a 0 1 0
chr6:44250330|44250541 hsa-miR-3125 1 1 0
chr6:44250330|44250541 hsa-miR-3132 1 0 0
chr6:44250330|44250541 hsa-miR-3153 1 0 0
chr6:44250330|44250541 hsa-miR-3154 1 0 0
chr6:44250330|44250541 hsa-miR-4298 1 0 0
chr6:44250330|44250541 hsa-miR-4306 1 0 0
chr6:44250330|44250541 hsa-miR-4322 1 0 0
chr6:44250330|44250541 hsa-miR-4257 1 0 0
chr6:44250330|44250541 hsa-miR-4271 1 1 0
chr6:44250330|44250541 hsa-miR-3911 1 0 0
chr6:44250330|44250541 hsa-miR-3916 1 1 0
chr6:44250330|44250541 hsa-miR-4458 1 0 0
chr6:44250330|44250541 hsa-miR-4496 0 1 0
chr6:44250330|44250541 hsa-miR-2392 1 0 0
chr6:44250330|44250541 hsa-miR-4510 1 0 0
chr6:44250330|44250541 hsa-miR-4525 1 0 0
chr6:44250330|44250541 hsa-miR-4644 1 1 0
chr6:44250330|44250541 hsa-miR-4689 1 1 0
chr6:44250330|44250541 hsa-miR-4706 1 0 0
chr6:44250330|44250541 hsa-miR-4710 1 0 0
chr6:44250330|44250541 hsa-miR-4739 1 0 0
chr6:44250330|44250541 hsa-miR-5191 1 1 0
chr6:44250330|44250541 hsa-miR-5739 1 0 0
chr6:44250330|44250541 hsa-miR-6076 1 0 0
chr6:44250330|44250541 hsa-miR-6090 1 0 0
chr6:44250330|44250541 hsa-miR-6124 1 0 0
chr6:44250330|44250541 hsa-miR-6127 1 0 0
chr6:44250330|44250541 hsa-miR-6129 1 0 0
chr6:44250330|44250541 hsa-miR-6133 1 0 0
chr6:44250330|44250541 hsa-miR-7150 1 0 0
chr6:44250330|44250541 hsa-miR-7515 1 0 0
chr6:44250330|44250541 hsa-miR-8085 1 0 0
chr6:44250330|44250541 hsa-miR-9500 1 0 0
chr6:44250330|44250541 hsa-miR-12114 1 0 0
chr6:44250330|44250541 hsa-miR-12118 1 0 0
chr6:44250330|44250541 hsa-miR-4433b-3p 1 0 0
chr6:44250330|44250541 hsa-miR-122-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6734-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6809-5p 1 1 0
chr6:44250330|44250541 hsa-miR-6765-5p 1 0 0
chr6:44250330|44250541 hsa-miR-7106-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6825-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6894-5p 1 1 0
chr6:44250330|44250541 hsa-miR-125a-3p 1 0 0
chr6:44250330|44250541 hsa-miR-6804-5p 1 1 0
chr6:44250330|44250541 hsa-miR-6833-5p 1 0 0
chr6:44250330|44250541 hsa-miR-1236-5p 1 0 0
chr6:44250330|44250541 hsa-miR-5187-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4786-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6515-5p 1 0 0
chr6:44250330|44250541 hsa-miR-7847-3p 1 0 0
chr6:44250330|44250541 hsa-miR-4695-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6744-5p 1 1 0
chr6:44250330|44250541 hsa-miR-4709-3p 1 0 0
chr6:44250330|44250541 hsa-miR-6730-5p 1 1 0
chr6:44250330|44250541 hsa-miR-7154-3p 1 0 0
chr6:44250330|44250541 hsa-miR-197-5p 1 0 0
chr6:44250330|44250541 hsa-miR-7845-5p 1 0 0
chr6:44250330|44250541 hsa-miR-3605-5p 1 1 0
chr6:44250330|44250541 hsa-miR-6748-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6793-5p 1 1 0
chr6:44250330|44250541 hsa-miR-6796-5p 1 0 0
chr6:44250330|44250541 hsa-miR-3190-3p 1 0 0
chr6:44250330|44250541 hsa-miR-23a-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6798-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6760-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6881-5p 1 1 0
chr6:44250330|44250541 hsa-miR-2467-3p 0 1 0
chr6:44250330|44250541 hsa-miR-6782-5p 1 0 0
chr6:44250330|44250541 hsa-miR-185-5p 1 0 0
chr6:44250330|44250541 hsa-miR-1229-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4640-5p 1 0 0
chr6:44250330|44250541 hsa-miR-3691-5p 1 0 0
chr6:44250330|44250541 hsa-miR-885-3p 1 0 0
chr6:44250330|44250541 hsa-miR-6847-5p 1 1 0
chr6:44250330|44250541 hsa-miR-3202 1 0 0
chr6:44250330|44250541 hsa-miR-6717-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6878-5p 1 0 0
chr6:44250330|44250541 hsa-miR-5010-5p 1 1 0
chr6:44250330|44250541 hsa-miR-5584-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4776-5p 0 1 0
chr6:44250330|44250541 hsa-miR-423-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4724-5p 0 1 0
chr6:44250330|44250541 hsa-miR-1207-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4763-3p 1 0 0
chr6:44250330|44250541 hsa-miR-6769b-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6865-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6737-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6743-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6769a-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6819-5p 1 0 0
chr6:44250330|44250541 hsa-miR-11181-3p 1 1 0
chr6:44250330|44250541 hsa-miR-6763-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6808-5p 1 0 0
chr6:44250330|44250541 hsa-miR-7111-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6780b-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4632-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4725-3p 1 0 0
chr6:44250330|44250541 hsa-miR-4726-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6738-5p 1 0 0
chr6:44250330|44250541 hsa-miR-675-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6794-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6846-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6858-5p 1 1 0
chr6:44250330|44250541 hsa-miR-6831-5p 1 1 0
chr6:44250330|44250541 hsa-miR-1238-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4758-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4769-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6731-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6739-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6758-5p 1 0 0
chr6:44250330|44250541 hsa-miR-3173-3p 1 0 0
chr6:44250330|44250541 hsa-miR-3679-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6891-5p 1 0 0
chr6:44250330|44250541 hsa-miR-4716-3p 1 0 0
chr6:44250330|44250541 hsa-miR-4667-5p 1 0 0
chr6:44250330|44250541 hsa-miR-6859-5p 1 1 0
chr6:44250330|44250541 hsa-miR-1255b-5p 1 0 0
chr6:44250330|44250541 hsa-miR-9902 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:44250330|44250541
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MYFSLIFLVFFFLSLPLSSSSSEPTSSILGFSSSSLSSSSFSPFSSS
Nucleotide Sequence ATGTATTTCTCTTTGATCTTCTTAGTTTTCTTCTTCTTATCCTTACCGCTGTCATCCTCCTCATCTGAACCCACATCTTCGATCTTGGGTTTTTCTTCATCATCTTTATCTTCCTCTTCTTTCTCACCTTTCTCTTCCTCT
CircID chr6:44250330|44250541
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MNPHLRSWVFLHHLYLPLLSHLSLPL
Nucleotide Sequence CTGAACCCACATCTTCGATCTTGGGTTTTTCTTCATCATCTTTATCTTCCTCTTCTTTCTCACCTTTCTCTTCCTCTG
CircID chr6:44250330|44250541
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MMKKNPRSKMWVQMRRMTAVRIRRRKLRRSKRNTLIRKN
Nucleotide Sequence ATGATGAAGAAAAACCCAAGATCGAAGATGTGGGTTCAGATGAGGAGGATGACAGCGGTAAGGATAAGAAGAAGAAAACTAAGAAGATCAAAGAGAAATACATTGATCAGGAAGAACTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab