CircRNA Information

General Information
circRNA Basic Information
CircID chr6:44253045|44253372
Strand +
CircType exon
Host Gene ENSG00000096384.18;
Algorism CIRI2;
Sequence CTAGCTTGATCATGCGATAGATGCGGTTGGAGTGGGTCTGGGGATCCTCAAGGGAAAAGCCAGAAGATAGCAGGGCGGTTTCAAACAGCAGCACCACCAGGTCCTTAACTGCCTTATCATTCTTGTCGGCCTCAGCCTTCTGCCGCAGCGTCTCCACAATGGGGTGGTCAGGGTTGATCTCCAGGTGCTTTTTGGCCATCATATAGCCCATGGTGGAGTTGTCCCGAAGTGCCTGGGCTTTCATGATCCGCTCCATATTGGCTGTCCAGCCGTAGGTGCTGGTCACAATGCAGCAAGGTGAAGACACAAGTCTATTGGAGATTGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:44253045|44253372 hsa-miR-33a-5p 0 0 1
chr6:44253045|44253372 hsa-miR-33a-3p 0 0 1
chr6:44253045|44253372 hsa-miR-204-5p 0 0 1
chr6:44253045|44253372 hsa-miR-204-3p 0 0 1
chr6:44253045|44253372 hsa-miR-211-5p 0 0 1
chr6:44253045|44253372 hsa-miR-211-3p 0 0 1
chr6:44253045|44253372 hsa-miR-149-5p 0 0 1
chr6:44253045|44253372 hsa-miR-149-3p 0 0 1
chr6:44253045|44253372 hsa-miR-412-5p 0 0 1
chr6:44253045|44253372 hsa-miR-412-3p 0 0 1
chr6:44253045|44253372 hsa-miR-492 0 0 1
chr6:44253045|44253372 hsa-miR-506-5p 0 0 1
chr6:44253045|44253372 hsa-miR-506-3p 0 0 1
chr6:44253045|44253372 hsa-miR-581 0 0 1
chr6:44253045|44253372 hsa-miR-592 0 0 1
chr6:44253045|44253372 hsa-miR-599 0 0 1
chr6:44253045|44253372 hsa-miR-619-5p 0 0 1
chr6:44253045|44253372 hsa-miR-619-3p 0 0 1
chr6:44253045|44253372 hsa-miR-620 0 0 1
chr6:44253045|44253372 hsa-miR-623 0 0 1
chr6:44253045|44253372 hsa-miR-631 0 0 1
chr6:44253045|44253372 hsa-miR-33b-5p 0 0 1
chr6:44253045|44253372 hsa-miR-33b-3p 0 0 1
chr6:44253045|44253372 hsa-miR-634 0 0 1
chr6:44253045|44253372 hsa-miR-758-5p 0 0 1
chr6:44253045|44253372 hsa-miR-758-3p 0 0 1
chr6:44253045|44253372 hsa-miR-298 0 0 1
chr6:44253045|44253372 hsa-miR-1270 0 0 1
chr6:44253045|44253372 hsa-miR-1272 0 0 1
chr6:44253045|44253372 hsa-miR-1322 0 0 1
chr6:44253045|44253372 hsa-miR-139-3p 0 0 1
chr6:44253045|44253372 hsa-miR-1224-5p 1 0 1
chr6:44253045|44253372 hsa-miR-876-3p 0 0 1
chr6:44253045|44253372 hsa-miR-515-5p 0 0 1
chr6:44253045|44253372 hsa-miR-323-5p 0 0 1
chr6:44253045|44253372 hsa-miR-124 0 0 1
chr6:44253045|44253372 hsa-miR-549 0 0 1
chr6:44253045|44253372 hsa-miR-1185 0 0 1
chr6:44253045|44253372 hsa-miR-1259 0 0 1
chr6:44253045|44253372 hsa-miR-639 1 0 0
chr6:44253045|44253372 hsa-miR-665 1 0 0
chr6:44253045|44253372 hsa-miR-1265 1 0 0
chr6:44253045|44253372 hsa-miR-1268a 1 0 0
chr6:44253045|44253372 hsa-miR-2861 1 0 0
chr6:44253045|44253372 hsa-miR-1268b 1 0 0
chr6:44253045|44253372 hsa-miR-4512 1 0 0
chr6:44253045|44253372 hsa-miR-4535 1 0 0
chr6:44253045|44253372 hsa-miR-3960 1 0 0
chr6:44253045|44253372 hsa-miR-4656 1 0 0
chr6:44253045|44253372 hsa-miR-4689 1 0 0
chr6:44253045|44253372 hsa-miR-4734 1 0 0
chr6:44253045|44253372 hsa-miR-4751 1 0 0
chr6:44253045|44253372 hsa-miR-5787 1 0 0
chr6:44253045|44253372 hsa-miR-6085 1 0 0
chr6:44253045|44253372 hsa-miR-8072 1 0 0
chr6:44253045|44253372 hsa-miR-8080 1 0 0
chr6:44253045|44253372 hsa-miR-8083 1 0 0
chr6:44253045|44253372 hsa-miR-8089 1 0 0
chr6:44253045|44253372 hsa-miR-6089 1 0 0
chr6:44253045|44253372 hsa-miR-7847-3p 1 0 0
chr6:44253045|44253372 hsa-miR-6746-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6820-5p 1 0 0
chr6:44253045|44253372 hsa-miR-7108-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6796-5p 1 0 0
chr6:44253045|44253372 hsa-miR-185-3p 1 0 0
chr6:44253045|44253372 hsa-miR-6888-5p 1 0 0
chr6:44253045|44253372 hsa-miR-4640-5p 1 0 0
chr6:44253045|44253372 hsa-miR-4650-3p 1 0 0
chr6:44253045|44253372 hsa-miR-6749-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6877-5p 1 0 0
chr6:44253045|44253372 hsa-miR-3191-3p 1 0 0
chr6:44253045|44253372 hsa-miR-10400-5p 1 0 0
chr6:44253045|44253372 hsa-miR-4763-3p 1 0 0
chr6:44253045|44253372 hsa-miR-6726-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6756-5p 1 0 0
chr6:44253045|44253372 hsa-miR-4726-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6795-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6511a-5p 1 0 0
chr6:44253045|44253372 hsa-miR-6799-3p 1 0 0
chr6:44253045|44253372 hsa-miR-6810-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr6:44253045|44253372
ORF Type ORF1
Protein Length 53
Nucleotide Length 162
Protein Sequence MPQRLHNGVVRVDLQVLFGHHIAHGGVVPKCLGFHDPLHIGCPAVGAGHNAAR
Nucleotide Sequence CTGCCGCAGCGTCTCCACAATGGGGTGGTCAGGGTTGATCTCCAGGTGCTTTTTGGCCATCATATAGCCCATGGTGGAGTTGTCCCGAAGTGCCTGGGCTTTCATGATCCGCTCCATATTGGCTGTCCAGCCGTAGGTGCTGGTCACAATGCAGCAAGGTGA
CircID chr6:44253045|44253372
ORF Type ORF2
Protein Length 61
Nucleotide Length 186
Protein Sequence MRLEWVWGSSREKPEDSRAVSNSSTTRSLTALSFLSASAFCRSVSTMGWSGLISRCFLAII
Nucleotide Sequence ATGCGGTTGGAGTGGGTCTGGGGATCCTCAAGGGAAAAGCCAGAAGATAGCAGGGCGGTTTCAAACAGCAGCACCACCAGGTCCTTAACTGCCTTATCATTCTTGTCGGCCTCAGCCTTCTGCCGCAGCGTCTCCACAATGGGGTGGTCAGGGTTGATCTCCAGGTGCTTTTTGGCCATCATATAG
CircID chr6:44253045|44253372
ORF Type ORF3
Protein Length 85
Nucleotide Length 255
Protein Sequence MERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSGFSLEDPQTHSNRIYRMIKL
Nucleotide Sequence ATGGAGCGGATCATGAAAGCCCAGGCACTTCGGGACAACTCCACCATGGGCTATATGATGGCCAAAAAGCACCTGGAGATCAACCCTGACCACCCCATTGTGGAGACGCTGCGGCAGAAGGCTGAGGCCGACAAGAATGATAAGGCAGTTAAGGACCTGGTGGTGCTGCTGTTTGAAACCGCCCTGCTATCTTCTGGCTTTTCCCTTGAGGATCCCCAGACCCACTCCAACCGCATCTATCGCATGATCAAGCTA
CircID chr6:44253045|44253372
ORF Type ORF4
Protein Length 53
Nucleotide Length 162
Protein Sequence MTTPLWRRCGRRLRPTRMIRQLRTWWCCCLKPPCYLLAFPLRIPRPTPTASIA
Nucleotide Sequence CTGACCACCCCATTGTGGAGACGCTGCGGCAGAAGGCTGAGGCCGACAAGAATGATAAGGCAGTTAAGGACCTGGTGGTGCTGCTGTTTGAAACCGCCCTGCTATCTTCTGGCTTTTCCCTTGAGGATCCCCAGACCCACTCCAACCGCATCTATCGCATGA
CircID chr6:44253045|44253372
ORF Type ORF5
Protein Length 42
Nucleotide Length 129
Protein Sequence MLHCDQHLRLDSQYGADHESPGTSGQLHHGLYDGQKAPGDQP
Nucleotide Sequence TTGCTGCATTGTGACCAGCACCTACGGCTGGACAGCCAATATGGAGCGGATCATGAAAGCCCAGGCACTTCGGGACAACTCCACCATGGGCTATATGATGGCCAAAAAGCACCTGGAGATCAACCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab