CircNet

General Information

circRNA Basic Information

CircID	chr6:46652406\|46652597
Strand	-
CircType	exon
Host Gene	ENSG00000146233.6;
Algorism	CIRI2;
Sequence	CTTGATTCTTGCTTTCTCTATAAATTCTAGAGGGGCTTTCCCAAACTCAAATCCAACTCCAATCCAAGGAATCCAGCCCTTGATGCACGGGGGTCTACGCAAATTCTTCCGCTGAAGGAGTAAGAACAGAGCAAGGCAACCCAGGATTATAATCACTGTTGGGGAAATTAGTTCCATGTTTTTGTCCAGCAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	targetScan
chr6:46652406\|46652597	hsa-miR-205-5p	0	1
chr6:46652406\|46652597	hsa-miR-205-3p	0	1
chr6:46652406\|46652597	hsa-miR-374a-5p	0	1
chr6:46652406\|46652597	hsa-miR-374a-3p	0	1
chr6:46652406\|46652597	hsa-miR-517-5p	0	1
chr6:46652406\|46652597	hsa-miR-517b-3p	0	1
chr6:46652406\|46652597	hsa-miR-571	0	1
chr6:46652406\|46652597	hsa-miR-374b-5p	0	1
chr6:46652406\|46652597	hsa-miR-374b-3p	0	1
chr6:46652406\|46652597	hsa-miR-1287-5p	0	1
chr6:46652406\|46652597	hsa-miR-1287-3p	0	1
chr6:46652406\|46652597	hsa-miR-1290	0	1
chr6:46652406\|46652597	hsa-miR-502-5p	0	1
chr6:46652406\|46652597	hsa-miR-876-5p	0	1
chr6:46652406\|46652597	hsa-miR-500	0	1
chr6:46652406\|46652597	hsa-miR-923	0	1
chr6:46652406\|46652597	hsa-miR-661	1	0
chr6:46652406\|46652597	hsa-miR-658	1	0
chr6:46652406\|46652597	hsa-miR-1587	1	0
chr6:46652406\|46652597	hsa-miR-4741	1	0
chr6:46652406\|46652597	hsa-miR-6793-5p	1	0
chr6:46652406\|46652597	hsa-miR-23a-5p	1	0
chr6:46652406\|46652597	hsa-miR-939-3p	1	0
chr6:46652406\|46652597	hsa-miR-1229-5p	1	0
chr6:46652406\|46652597	hsa-miR-296-3p	1	0
chr6:46652406\|46652597	hsa-miR-6742-3p	1	0
chr6:46652406\|46652597	hsa-miR-4709-5p	1	0
chr6:46652406\|46652597	hsa-miR-6803-5p	1	0
chr6:46652406\|46652597	hsa-miR-3198	1	0
chr6:46652406\|46652597	hsa-miR-3940-5p	1	0
chr6:46652406\|46652597	hsa-miR-6805-3p	1	0
chr6:46652406\|46652597	hsa-miR-6783-3p	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:46652406\|46652597
ORF Type	ORF1
Protein Length	37
Nucleotide Length	114
Protein Sequence	LILAFSINSRGAFPNSNPTPIQGIQPLMHGGLRKFFR
Nucleotide Sequence	TTGATTCTTGCTTTCTCTATAAATTCTAGAGGGGCTTTCCCAAACTCAAATCCAACTCCAATCCAAGGAATCCAGCCCTTGATGCACGGGGGTCTACGCAAATTCTTCCGCTGA

CircID	chr6:46652406\|46652597
ORF Type	ORF2
Protein Length	63
Nucleotide Length	189
Protein Sequence	MDKNMELISPTVIIILGCLALFLLLQRKNLRRPPCIKGWIPWIGVGFEFGKAPLEFIEKARIK
Nucleotide Sequence	CTGGACAAAAACATGGAACTAATTTCCCCAACAGTGATTATAATCCTGGGTTGCCTTGCTCTGTTCTTACTCCTTCAGCGGAAGAATTTGCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTTGGATTGGAGTTGGATTTGAGTTTGGGAAAGCCCCTCTAGAATTTATAGAGAAAGCAAGAATCAAG

CircID	chr6:46652406\|46652597
ORF Type	ORF3
Protein Length	35
Nucleotide Length	108
Protein Sequence	MLCSYSFSGRICVDPRASRAGFLGLELDLSLGKPL
Nucleotide Sequence	TTGCTCTGTTCTTACTCCTTCAGCGGAAGAATTTGCGTAGACCCCCGTGCATCAAGGGCTGGATTCCTTGGATTGGAGTTGGATTTGAGTTTGGGAAAGCCCCTCTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information