CircNet

General Information

circRNA Basic Information

CircID	chr6:47232649\|47232856
Strand	-
CircType	exon
Host Gene	ENSG00000146072.6;
Algorism	CIRI2;
Sequence	ACACACACACAAACACACACACACACCCCAAACAACAAAAATCAGAAACAGAAGAAAATTAAAAAACCACCCTGCCACTAAATTGAGTAATTTCCAGAATGCAGTATCCCTATGTTCTACAGCAGGTCAGGAAGATGGCTATAAACAGAGTCCAGGAGGGTCTGGCTGGCTTCCTGGCTCTTGACTCCAATAATTTCGAATAGCCGGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:47232649\|47232856	hsa-miR-217-5p	0	0	1
chr6:47232649\|47232856	hsa-miR-217-3p	0	0	1
chr6:47232649\|47232856	hsa-miR-370-5p	0	0	1
chr6:47232649\|47232856	hsa-miR-370-3p	0	0	1
chr6:47232649\|47232856	hsa-miR-335-5p	0	0	1
chr6:47232649\|47232856	hsa-miR-335-3p	0	0	1
chr6:47232649\|47232856	hsa-miR-422a	-1	0	1
chr6:47232649\|47232856	hsa-miR-599	0	0	1
chr6:47232649\|47232856	hsa-miR-608	-18	0	1
chr6:47232649\|47232856	hsa-miR-631	-3	0	1
chr6:47232649\|47232856	hsa-miR-888-5p	0	0	1
chr6:47232649\|47232856	hsa-miR-888-3p	0	0	1
chr6:47232649\|47232856	hsa-miR-944	0	0	1
chr6:47232649\|47232856	hsa-miR-1200	-5	0	1
chr6:47232649\|47232856	hsa-miR-1293	-14	0	1
chr6:47232649\|47232856	hsa-miR-1299	-11	0	1
chr6:47232649\|47232856	hsa-miR-671-5p	-5	0	1
chr6:47232649\|47232856	hsa-miR-1289	0	0	1
chr6:47232649\|47232856	hsa-miR-876-3p	-11	0	1
chr6:47232649\|47232856	hsa-miR-875-3p	-5	0	1
chr6:47232649\|47232856	hsa-miR-1207-5p	-14	0	1
chr6:47232649\|47232856	hsa-miR-342-5p	-17	0	1
chr6:47232649\|47232856	hsa-miR-509-3-5p	-8	0	1
chr6:47232649\|47232856	hsa-miR-509-5p	-10	0	1
chr6:47232649\|47232856	hsa-miR-590-3p	-1	0	1
chr6:47232649\|47232856	hsa-miR-378	0	0	1
chr6:47232649\|47232856	hsa-miR-516b	0	0	1
chr6:47232649\|47232856	hsa-miR-147	0	0	1
chr6:47232649\|47232856	hsa-miR-4455	-22	1	0
chr6:47232649\|47232856	hsa-miR-378h	0	1	0
chr6:47232649\|47232856	hsa-miR-4522	-4	1	0
chr6:47232649\|47232856	hsa-miR-5572	-15	1	0
chr6:47232649\|47232856	hsa-miR-8058	-3	1	0
chr6:47232649\|47232856	hsa-miR-141-5p	-1	1	0
chr6:47232649\|47232856	hsa-miR-505-5p	-7	1	0
chr6:47232649\|47232856	hsa-miR-4786-3p	-9	1	0
chr6:47232649\|47232856	hsa-miR-4640-5p	-14	1	0
chr6:47232649\|47232856	hsa-miR-619-3p	-8	1	0
chr6:47232649\|47232856	hsa-miR-574-5p	-31	1	0
chr6:47232649\|47232856	hsa-miR-3198	-5	1	0
chr6:47232649\|47232856	hsa-miR-664a-5p	-15	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:47232649\|47232856
ORF Type	ORF1
Protein Length	33
Nucleotide Length	102
Protein Sequence	MSNFQNAVSLCSTAGQEDGYKQSPGGSGWLPGS
Nucleotide Sequence	TTGAGTAATTTCCAGAATGCAGTATCCCTATGTTCTACAGCAGGTCAGGAAGATGGCTATAAACAGAGTCCAGGAGGGTCTGGCTGGCTTCCTGGCTCTTGA

CircID	chr6:47232649\|47232856
ORF Type	ORF2
Protein Length	34
Nucleotide Length	105
Protein Sequence	MQYPYVLQQVRKMAINRVQEGLAGFLALDSNNFE
Nucleotide Sequence	ATGCAGTATCCCTATGTTCTACAGCAGGTCAGGAAGATGGCTATAAACAGAGTCCAGGAGGGTCTGGCTGGCTTCCTGGCTCTTGACTCCAATAATTTCGAATAG

CircID	chr6:47232649\|47232856
ORF Type	ORF3
Protein Length	26
Nucleotide Length	81
Protein Sequence	MESRARKPARPSWTLFIAIFLTCCRT
Nucleotide Sequence	TTGGAGTCAAGAGCCAGGAAGCCAGCCAGACCCTCCTGGACTCTGTTTATAGCCATCTTCCTGACCTGCTGTAGAACATAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information