CircRNA Information

General Information
circRNA Basic Information
CircID chr6:47503280|47504758
Strand +
CircType exon
Host Gene ENSG00000198087.7;
Algorism CIRI2;
Sequence TTTATTCTTAACGAAATTGTCAGGGAACATTCCTCTTCTCCCATTTAGTTCTCCTTCCAGCCACCCTTCCTCCTGTAGCTTTTTCACATTCCTGATGATTTCTCCAACTCGAATAGTTAATTCATCATCATGTACAGCATCATAGTCATACTCCACAATATAGTCAA
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:47503280|47504758 hsa-miR-146a-5p 0 0 1
chr6:47503280|47504758 hsa-miR-146a-3p 0 0 1
chr6:47503280|47504758 hsa-miR-206 0 1 1
chr6:47503280|47504758 hsa-miR-522-5p 0 0 1
chr6:47503280|47504758 hsa-miR-522-3p 0 0 1
chr6:47503280|47504758 hsa-miR-539-5p 0 0 1
chr6:47503280|47504758 hsa-miR-539-3p 0 0 1
chr6:47503280|47504758 hsa-miR-571 0 0 1
chr6:47503280|47504758 hsa-miR-613 0 1 1
chr6:47503280|47504758 hsa-miR-620 0 0 1
chr6:47503280|47504758 hsa-miR-873-5p 0 0 1
chr6:47503280|47504758 hsa-miR-873-3p 0 0 1
chr6:47503280|47504758 hsa-miR-1253 0 0 1
chr6:47503280|47504758 hsa-miR-1270 0 0 1
chr6:47503280|47504758 hsa-miR-1272 0 0 1
chr6:47503280|47504758 hsa-miR-1322 0 1 1
chr6:47503280|47504758 hsa-miR-125a-5p 0 0 1
chr6:47503280|47504758 hsa-miR-146b-5p 0 0 1
chr6:47503280|47504758 hsa-miR-1274a 0 0 1
chr6:47503280|47504758 hsa-miR-125b 0 0 1
chr6:47503280|47504758 hsa-miR-1 0 0 1
chr6:47503280|47504758 hsa-miR-184 1 0 0
chr6:47503280|47504758 hsa-miR-608 1 0 0
chr6:47503280|47504758 hsa-miR-765 1 1 0
chr6:47503280|47504758 hsa-miR-1293 1 0 0
chr6:47503280|47504758 hsa-miR-3125 1 0 0
chr6:47503280|47504758 hsa-miR-3131 1 0 0
chr6:47503280|47504758 hsa-miR-3141 1 0 0
chr6:47503280|47504758 hsa-miR-3154 1 0 0
chr6:47503280|47504758 hsa-miR-3652 1 1 0
chr6:47503280|47504758 hsa-miR-3916 1 1 0
chr6:47503280|47504758 hsa-miR-4430 1 1 0
chr6:47503280|47504758 hsa-miR-4458 1 0 0
chr6:47503280|47504758 hsa-miR-3135b 1 0 0
chr6:47503280|47504758 hsa-miR-4505 1 0 0
chr6:47503280|47504758 hsa-miR-2392 1 0 0
chr6:47503280|47504758 hsa-miR-4533 1 0 0
chr6:47503280|47504758 hsa-miR-4651 1 0 0
chr6:47503280|47504758 hsa-miR-4689 1 0 0
chr6:47503280|47504758 hsa-miR-4706 1 0 0
chr6:47503280|47504758 hsa-miR-4739 1 0 0
chr6:47503280|47504758 hsa-miR-5194 1 1 0
chr6:47503280|47504758 hsa-miR-5681a 1 0 0
chr6:47503280|47504758 hsa-miR-5787 1 0 0
chr6:47503280|47504758 hsa-miR-6124 1 0 0
chr6:47503280|47504758 hsa-miR-6127 1 1 0
chr6:47503280|47504758 hsa-miR-6133 1 0 0
chr6:47503280|47504758 hsa-miR-6165 1 0 0
chr6:47503280|47504758 hsa-miR-6745 1 0 0
chr6:47503280|47504758 hsa-miR-12118 1 0 0
chr6:47503280|47504758 hsa-miR-4433b-3p 1 0 0
chr6:47503280|47504758 hsa-miR-122-5p 1 1 0
chr6:47503280|47504758 hsa-miR-4433a-3p 1 0 0
chr6:47503280|47504758 hsa-miR-7106-5p 1 1 0
chr6:47503280|47504758 hsa-miR-6894-5p 1 0 0
chr6:47503280|47504758 hsa-miR-8071 1 0 0
chr6:47503280|47504758 hsa-miR-766-5p 1 1 0
chr6:47503280|47504758 hsa-miR-6833-5p 1 0 0
chr6:47503280|47504758 hsa-miR-7114-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6515-5p 1 0 0
chr6:47503280|47504758 hsa-miR-4695-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6746-5p 1 0 0
chr6:47503280|47504758 hsa-miR-4709-3p 0 1 0
chr6:47503280|47504758 hsa-miR-4722-5p 1 0 0
chr6:47503280|47504758 hsa-miR-7154-3p 1 0 0
chr6:47503280|47504758 hsa-miR-4474-3p 1 0 0
chr6:47503280|47504758 hsa-miR-432-5p 0 1 0
chr6:47503280|47504758 hsa-miR-6742-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6871-5p 0 1 0
chr6:47503280|47504758 hsa-miR-6748-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6796-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6798-5p 1 1 0
chr6:47503280|47504758 hsa-miR-1224-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6760-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6782-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6835-5p 1 0 0
chr6:47503280|47504758 hsa-miR-30c-2-3p 0 1 0
chr6:47503280|47504758 hsa-miR-296-3p 1 0 0
chr6:47503280|47504758 hsa-miR-6771-5p 1 0 0
chr6:47503280|47504758 hsa-miR-3202 1 0 0
chr6:47503280|47504758 hsa-miR-149-3p 1 0 0
chr6:47503280|47504758 hsa-miR-6824-5p 1 0 0
chr6:47503280|47504758 hsa-miR-3925-5p 1 0 0
chr6:47503280|47504758 hsa-miR-4444 0 1 0
chr6:47503280|47504758 hsa-miR-1207-5p 1 1 0
chr6:47503280|47504758 hsa-miR-6769b-5p 1 0 0
chr6:47503280|47504758 hsa-miR-5001-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6737-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6754-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6756-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6819-5p 1 0 0
chr6:47503280|47504758 hsa-miR-11181-3p 1 0 0
chr6:47503280|47504758 hsa-miR-1249-5p 1 1 0
chr6:47503280|47504758 hsa-miR-6722-3p 1 0 0
chr6:47503280|47504758 hsa-miR-6779-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6780a-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6788-5p 1 1 0
chr6:47503280|47504758 hsa-miR-6797-5p 1 1 0
chr6:47503280|47504758 hsa-miR-6808-5p 1 0 0
chr6:47503280|47504758 hsa-miR-5196-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6780b-5p 1 1 0
chr6:47503280|47504758 hsa-miR-10526-3p 1 0 0
chr6:47503280|47504758 hsa-miR-6738-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6794-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6846-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6848-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6858-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6883-5p 1 0 0
chr6:47503280|47504758 hsa-miR-30c-1-3p 0 1 0
chr6:47503280|47504758 hsa-miR-1914-3p 1 0 0
chr6:47503280|47504758 hsa-miR-3173-3p 1 0 0
chr6:47503280|47504758 hsa-miR-4646-5p 1 0 0
chr6:47503280|47504758 hsa-miR-4747-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6876-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6891-5p 1 0 0
chr6:47503280|47504758 hsa-miR-4716-3p 1 0 0
chr6:47503280|47504758 hsa-miR-6766-5p 1 0 0
chr6:47503280|47504758 hsa-miR-6785-5p 1 0 0
chr6:47503280|47504758 hsa-miR-10525-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr6:47503280|47504758
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MSGNIPLLPFSSPSSHPSSCSFFTFLMISPTRIVNSSSCTAS
Nucleotide Sequence TTGTCAGGGAACATTCCTCTTCTCCCATTTAGTTCTCCTTCCAGCCACCCTTCCTCCTGTAGCTTTTTCACATTCCTGATGATTTCTCCAACTCGAATAGTTAATTCATCATCATGTACAGCATCATAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab