CircNet

General Information

circRNA Basic Information

CircID	chr6:49440206\|49440320
Strand	-
CircType	exon
Host Gene	ENSG00000146085.7;
Algorism	CIRI2;
Sequence	CTGGAAAAGAGGGCCTATGTCCACATCAAAACCAAGATCAGCAAATCCTGTAGCAATAACTTTTGCTCCTCTGTCATGGCCATCTTGTCCCATTTTTGCTACAAGAAGACGAGGT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:49440206\|49440320	hsa-miR-221-5p	0	0	1
chr6:49440206\|49440320	hsa-miR-221-3p	0	0	1
chr6:49440206\|49440320	hsa-miR-222-5p	0	0	1
chr6:49440206\|49440320	hsa-miR-222-3p	0	0	1
chr6:49440206\|49440320	hsa-miR-137-5p	0	0	1
chr6:49440206\|49440320	hsa-miR-137-3p	0	0	1
chr6:49440206\|49440320	hsa-miR-578	0	0	1
chr6:49440206\|49440320	hsa-miR-643	0	0	1
chr6:49440206\|49440320	hsa-miR-548p	0	0	1
chr6:49440206\|49440320	hsa-miR-628-5p	0	0	1
chr6:49440206\|49440320	hsa-miR-1302	0	0	1
chr6:49440206\|49440320	hsa-miR-1205	0	1	0
chr6:49440206\|49440320	hsa-miR-4298	1	1	0
chr6:49440206\|49440320	hsa-miR-4647	0	1	0
chr6:49440206\|49440320	hsa-miR-6076	0	1	0
chr6:49440206\|49440320	hsa-miR-296-3p	1	0	0
chr6:49440206\|49440320	hsa-miR-548at-5p	0	1	0
chr6:49440206\|49440320	hsa-miR-6856-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:49440206\|49440320
ORF Type	ORF1
Protein Length	38
Nucleotide Length	114
Protein Sequence	LEKRAYVHIKTKISKSCSNNFCSSVMAILSHFCYKKTR
Nucleotide Sequence	CTGGAAAAGAGGGCCTATGTCCACATCAAAACCAAGATCAGCAAATCCTGTAGCAATAACTTTTGCTCCTCTGTCATGGCCATCTTGTCCCATTTTTGCTACAAGAAGACGAGG

CircID	chr6:49440206\|49440320
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MSTSKPRSANPVAITFAPLSWPSCPIFATRRRG
Nucleotide Sequence	ATGTCCACATCAAAACCAAGATCAGCAAATCCTGTAGCAATAACTTTTGCTCCTCTGTCATGGCCATCTTGTCCCATTTTTGCTACAAGAAGACGAGGT

CircID	chr6:49440206\|49440320
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MGQDGHDRGAKVIATGFADLGFDVDIGPLFQ
Nucleotide Sequence	ATGGGACAAGATGGCCATGACAGAGGAGCAAAAGTTATTGCTACAGGATTTGCTGATCTTGGTTTTGATGTGGACATAGGCCCTCTTTTCCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information