CircRNA Information

General Information
circRNA Basic Information
CircID chr6:52264147|52264449
Strand -
CircType exon
Host Gene ENSG00000112118.16;
Algorism CIRI2;
Sequence GTGCCTCAGAGCTTCTCTCCACCAATTGGAACCACCCAAAGCCTAGTCTAGACCAAAGTGCTCTGGAGAAAAAAAACAAAACAAAAAAACAGCAAACAGAAAACAGTTGTGCCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:52264147|52264449 hsa-miR-22-5p 0 0 1
chr6:52264147|52264449 hsa-miR-22-3p 0 0 1
chr6:52264147|52264449 hsa-miR-25-5p 0 0 1
chr6:52264147|52264449 hsa-miR-25-3p 0 0 1
chr6:52264147|52264449 hsa-miR-32-5p 0 0 1
chr6:52264147|52264449 hsa-miR-32-3p 0 0 1
chr6:52264147|52264449 hsa-miR-149-5p 0 0 1
chr6:52264147|52264449 hsa-miR-149-3p 0 0 1
chr6:52264147|52264449 hsa-miR-185-5p 0 0 1
chr6:52264147|52264449 hsa-miR-185-3p 0 0 1
chr6:52264147|52264449 hsa-miR-320a-5p 0 0 1
chr6:52264147|52264449 hsa-miR-320a-3p 0 0 1
chr6:52264147|52264449 hsa-miR-363-5p 0 0 1
chr6:52264147|52264449 hsa-miR-363-3p 0 0 1
chr6:52264147|52264449 hsa-miR-367-5p 0 0 1
chr6:52264147|52264449 hsa-miR-367-3p 0 0 1
chr6:52264147|52264449 hsa-miR-133b 0 0 1
chr6:52264147|52264449 hsa-miR-452-5p 0 0 1
chr6:52264147|52264449 hsa-miR-452-3p 0 0 1
chr6:52264147|52264449 hsa-miR-527 0 0 1
chr6:52264147|52264449 hsa-miR-92b-5p 0 0 1
chr6:52264147|52264449 hsa-miR-92b-3p 0 0 1
chr6:52264147|52264449 hsa-miR-583 0 0 1
chr6:52264147|52264449 hsa-miR-601 1 0 1
chr6:52264147|52264449 hsa-miR-608 1 0 1
chr6:52264147|52264449 hsa-miR-617 0 0 1
chr6:52264147|52264449 hsa-miR-645 0 0 1
chr6:52264147|52264449 hsa-miR-766-5p 0 0 1
chr6:52264147|52264449 hsa-miR-766-3p 0 0 1
chr6:52264147|52264449 hsa-miR-892b 0 0 1
chr6:52264147|52264449 hsa-miR-1293 0 0 1
chr6:52264147|52264449 hsa-miR-1262 0 0 1
chr6:52264147|52264449 hsa-miR-1275 0 0 1
chr6:52264147|52264449 hsa-miR-1827 0 0 1
chr6:52264147|52264449 hsa-miR-129-5p 0 0 1
chr6:52264147|52264449 hsa-miR-525-5p 0 0 1
chr6:52264147|52264449 hsa-miR-188-3p 0 0 1
chr6:52264147|52264449 hsa-miR-876-3p 0 0 1
chr6:52264147|52264449 hsa-miR-342-5p 0 0 1
chr6:52264147|52264449 hsa-miR-520a-5p 0 0 1
chr6:52264147|52264449 hsa-miR-320b 1 0 1
chr6:52264147|52264449 hsa-miR-320c 0 0 1
chr6:52264147|52264449 hsa-miR-320d 0 0 1
chr6:52264147|52264449 hsa-miR-518a-5p 0 0 1
chr6:52264147|52264449 hsa-miR-515-5p 0 0 1
chr6:52264147|52264449 hsa-miR-9 0 0 1
chr6:52264147|52264449 hsa-miR-24 0 0 1
chr6:52264147|52264449 hsa-miR-133a 0 0 1
chr6:52264147|52264449 hsa-miR-92a 0 0 1
chr6:52264147|52264449 hsa-miR-760 1 0 0
chr6:52264147|52264449 hsa-miR-4481 1 0 0
chr6:52264147|52264449 hsa-miR-1587 1 0 0
chr6:52264147|52264449 hsa-miR-4644 0 1 0
chr6:52264147|52264449 hsa-miR-4651 1 0 0
chr6:52264147|52264449 hsa-miR-4656 1 0 0
chr6:52264147|52264449 hsa-miR-4682 0 1 0
chr6:52264147|52264449 hsa-miR-4689 1 1 0
chr6:52264147|52264449 hsa-miR-4706 1 0 0
chr6:52264147|52264449 hsa-miR-4710 0 1 0
chr6:52264147|52264449 hsa-miR-4751 1 0 0
chr6:52264147|52264449 hsa-miR-4784 0 1 0
chr6:52264147|52264449 hsa-miR-5698 1 1 0
chr6:52264147|52264449 hsa-miR-6745 1 1 0
chr6:52264147|52264449 hsa-miR-8060 1 0 0
chr6:52264147|52264449 hsa-miR-8078 1 0 0
chr6:52264147|52264449 hsa-miR-8085 0 1 0
chr6:52264147|52264449 hsa-miR-12114 1 0 0
chr6:52264147|52264449 hsa-miR-4433b-3p 1 0 0
chr6:52264147|52264449 hsa-miR-6747-5p 1 1 0
chr6:52264147|52264449 hsa-miR-3150a-3p 0 1 0
chr6:52264147|52264449 hsa-miR-6857-5p 1 0 0
chr6:52264147|52264449 hsa-miR-29b-2-5p 0 1 0
chr6:52264147|52264449 hsa-miR-8071 1 1 0
chr6:52264147|52264449 hsa-miR-6880-5p 1 1 0
chr6:52264147|52264449 hsa-miR-7847-3p 1 0 0
chr6:52264147|52264449 hsa-miR-4695-5p 1 1 0
chr6:52264147|52264449 hsa-miR-6890-5p 1 1 0
chr6:52264147|52264449 hsa-miR-3187-3p 1 0 0
chr6:52264147|52264449 hsa-miR-197-5p 1 0 0
chr6:52264147|52264449 hsa-miR-148a-5p 0 1 0
chr6:52264147|52264449 hsa-miR-6716-5p 1 1 0
chr6:52264147|52264449 hsa-miR-6881-5p 1 0 0
chr6:52264147|52264449 hsa-miR-3150b-3p 0 1 0
chr6:52264147|52264449 hsa-miR-6821-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6786-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6740-5p 1 0 0
chr6:52264147|52264449 hsa-miR-3127-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6870-3p 0 1 0
chr6:52264147|52264449 hsa-miR-1233-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6812-5p 1 1 0
chr6:52264147|52264449 hsa-miR-5001-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6756-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6819-5p 1 1 0
chr6:52264147|52264449 hsa-miR-7110-5p 0 1 0
chr6:52264147|52264449 hsa-miR-1249-5p 0 1 0
chr6:52264147|52264449 hsa-miR-6751-5p 1 0 0
chr6:52264147|52264449 hsa-miR-3620-5p 1 0 0
chr6:52264147|52264449 hsa-miR-4685-5p 1 0 0
chr6:52264147|52264449 hsa-miR-675-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6887-5p 0 1 0
chr6:52264147|52264449 hsa-miR-4697-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6885-5p 1 0 0
chr6:52264147|52264449 hsa-miR-4758-5p 1 0 0
chr6:52264147|52264449 hsa-miR-365a-5p 1 0 0
chr6:52264147|52264449 hsa-miR-365b-5p 1 0 0
chr6:52264147|52264449 hsa-miR-3085-5p 1 0 0
chr6:52264147|52264449 hsa-miR-30c-1-3p 0 1 0
chr6:52264147|52264449 hsa-miR-6731-5p 0 1 0
chr6:52264147|52264449 hsa-miR-6856-5p 0 1 0
chr6:52264147|52264449 hsa-miR-6876-5p 0 1 0
chr6:52264147|52264449 hsa-miR-6724-5p 1 0 0
chr6:52264147|52264449 hsa-miR-3928-5p 0 1 0
chr6:52264147|52264449 hsa-miR-6817-5p 1 0 0
chr6:52264147|52264449 hsa-miR-6835-3p 0 1 0
chr6:52264147|52264449 hsa-miR-549a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr6:52264147|52264449
ORF Type ORF1
Protein Length 31
Nucleotide Length 96
Protein Sequence MCPQKYSEVICYLQLGLCGMGSRADEPVLLQ
Nucleotide Sequence TTGTGCCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATGA

CircID chr6:52264147|52264449
ORF Type ORF2
Protein Length 80
Nucleotide Length 240
Protein Sequence MEKKNKTKKQQTENSCAPKSTQKSYVIYNWVCVGWEVGRMSQCFCNEDAIVIVLSHCLLFPHPMAAFMTHSQRVHRVLNS
Nucleotide Sequence CTGGAGAAAAAAAACAAAACAAAAAAACAGCAAACAGAAAACAGTTGTGCCCCCAAAAGTACTCAGAAGTCATATGTTATTTACAATTGGGTTTGTGTGGGATGGGAAGTAGGGCGGATGAGCCAGTGCTTTTGCAATGAAGATGCAATAGTCATTGTCCTCTCCCACTGTCTCCTCTTTCCTCACCCCATGGCAGCTTTCATGACCCATTCCCAAAGGGTCCACCGAGTCCTGAACTCA

CircID chr6:52264147|52264449
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MTSEYFWGHNCFLFAVFLFCFFSPEHFGLD
Nucleotide Sequence ATGACTTCTGAGTACTTTTGGGGGCACAACTGTTTTCTGTTTGCTGTTTTTTTGTTTTGTTTTTTTTCTCCAGAGCACTTTGGTCTAGACTAG

CircID chr6:52264147|52264449
ORF Type ORF4
Protein Length 48
Nucleotide Length 147
Protein Sequence MGMGHESCHGVRKEETVGEDNDYCIFIAKALAHPPYFPSHTNPIVNNI
Nucleotide Sequence TTGGGAATGGGTCATGAAAGCTGCCATGGGGTGAGGAAAGAGGAGACAGTGGGAGAGGACAATGACTATTGCATCTTCATTGCAAAAGCACTGGCTCATCCGCCCTACTTCCCATCCCACACAAACCCAATTGTAAATAACATATGA

CircID chr6:52264147|52264449
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MSTFGGTTVFCLLFFCFVFFLQSTLV
Nucleotide Sequence CTGAGTACTTTTGGGGGCACAACTGTTTTCTGTTTGCTGTTTTTTTGTTTTGTTTTTTTTCTCCAGAGCACTTTGGTCTAG

CircID chr6:52264147|52264449
ORF Type ORF6
Protein Length 39
Nucleotide Length 117
Protein Sequence MGAQLFSVCCFFVLFFFSRALWSRLGFGWFQLVERSSEA
Nucleotide Sequence TTGGGGGCACAACTGTTTTCTGTTTGCTGTTTTTTTGTTTTGTTTTTTTTCTCCAGAGCACTTTGGTCTAGACTAGGCTTTGGGTGGTTCCAATTGGTGGAGAGAAGCTCTGAGGCA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites