CircNet

General Information

circRNA Basic Information

CircID	chr6:7211573\|7226656
Strand	+
CircType	exon
Host Gene	ENSG00000124782.19;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGTGACATTTGTTGTGTCACCTTTCGAACACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCACAAACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACGACTTAGGATTCACGGACTTCTCCTGTAGGAAGTTTCCTCGCATTTCTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:7211573\|7226656
ORF Type	ORF1
Protein Length	45
Nucleotide Length	135
Protein Sequence	MRGNFLQEKSVNPKSWKPAGIEGLFCMKGLPIASLGSCLWTSAL*
Nucleotide Sequence	ATGCGAGGAAACTTCCTACAGGAGAAGTCCGTGAATCCTAAGTCGTGGAAGCCAGCAGGAATTGAAGGGTTGTTCTGTATGAAAGGTCTGCCCATTGCATCCCTGGGAAGTTGTTTGTGGACAAGCGCGTTGTGA

CircID	chr6:7211573\|7226656
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MGRPFIQNNPSIPAGFHDLGFTDFSCRKFPRISQ
Nucleotide Sequence	ATGGGCAGACCTTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACGACTTAGGATTCACGGACTTCTCCTGTAGGAAGTTTCCTCGCATTTCTCAG

CircID	chr6:7211573\|7226656
ORF Type	ORF3
Protein Length	53
Nucleotide Length	159
Protein Sequence	LLCHLSNTSRTAASQRACPQTTSQGCNGQTFHTEQPFNSCWLPRLRIHGLLL*
Nucleotide Sequence	TTGTTGTGTCACCTTTCGAACACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCACAAACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACGACTTAGGATTCACGGACTTCTCCTGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:7211573\|7226656	KHSRP	2	0	0
chr6:7211573\|7226656	ELAVL1	4	1	0
chr6:7211573\|7226656	SF3B4	5	0	0
chr6:7211573\|7226656	METAP2	1	0	0
chr6:7211573\|7226656	TBRG4	2	0	0
chr6:7211573\|7226656	CELF2	1	0	0
chr6:7211573\|7226656	RC3H1	1	0	0
chr6:7211573\|7226656	PRPF8	13	3	1
chr6:7211573\|7226656	UPF1	2	0	0
chr6:7211573\|7226656	SRSF10	1	0	0
chr6:7211573\|7226656	TNRC6A	1	0	0
chr6:7211573\|7226656	CAPRIN1	2	0	0
chr6:7211573\|7226656	FMR1	3	1	4
chr6:7211573\|7226656	CPSF6	2	0	0
chr6:7211573\|7226656	GPKOW	1	0	0
chr6:7211573\|7226656	EIF3H	2	0	0
chr6:7211573\|7226656	SRSF7	4	0	2
chr6:7211573\|7226656	SRSF1	1	0	1
chr6:7211573\|7226656	NOP58	1	0	3
chr6:7211573\|7226656	TARBP2	0	1	0
chr6:7211573\|7226656	U2AF1	5	0	0
chr6:7211573\|7226656	U2AF2	33	7	2
chr6:7211573\|7226656	DDX54	4	0	5
chr6:7211573\|7226656	EFTUD2	2	0	0
chr6:7211573\|7226656	RBM10	3	1	0
chr6:7211573\|7226656	RBM15	1	0	0
chr6:7211573\|7226656	SF3A3	5	0	0
chr6:7211573\|7226656	PTBP1	3	0	0
chr6:7211573\|7226656	HNRNPC	2	4	0
chr6:7211573\|7226656	HNRNPD	0	1	0
chr6:7211573\|7226656	TRA2A	1	0	0
chr6:7211573\|7226656	FAM120A	1	0	0
chr6:7211573\|7226656	DDX3X	9	0	0
chr6:7211573\|7226656	SMNDC1	3	0	0
chr6:7211573\|7226656	ACIN1	1	0	1
chr6:7211573\|7226656	LIN28B	1	0	0
chr6:7211573\|7226656	FXR1	1	0	1
chr6:7211573\|7226656	FXR2	1	0	1
chr6:7211573\|7226656	IGF2BP1	12	1	4
chr6:7211573\|7226656	IGF2BP3	1	0	2
chr6:7211573\|7226656	IGF2BP2	3	0	4
chr6:7211573\|7226656	TARDBP	25	1	0
chr6:7211573\|7226656	YTHDC1	1	0	0
chr6:7211573\|7226656	BUD13	5	0	0
chr6:7211573\|7226656	CNBP	1	0	0
chr6:7211573\|7226656	EIF4G2	4	0	0
chr6:7211573\|7226656	CSTF2T	0	0	1
chr6:7211573\|7226656	TIA1	2	0	0
chr6:7211573\|7226656	CPSF7	2	0	0
chr6:7211573\|7226656	RBM22	4	1	0
chr6:7211573\|7226656	DKC1	1	0	0
chr6:7211573\|7226656	CSTF2	0	1	0
chr6:7211573\|7226656	EIF4A3	9	2	3
chr6:7211573\|7226656	FBL	0	1	0

CircRNA Information