CircRNA Information

General Information
circRNA Basic Information
CircID chr6:72258125|72292046
Strand +
CircType exon
Host Gene ENSG00000079841.18;
Algorism CIRI2;DCC;find_circ;
Sequence TAGGCTATAGGTCTAGTGCTAGAGAAAGTAAATCTACAACATTAACTGTGCCAGAACAGCAAAGAACAACTCATCACCGCTCACGTTCAGTATCTCCTCATCGCGGCAATGATCAGGGAAAGCCGCGTTCACGTTTACCAAATGTGCCATTACAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)
CircID chr6:72258125|72292046
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MAHLVNVNAAFPDHCRDEEILNVSGDELFFAVLAQLML*
Nucleotide Sequence ATGGCACATTTGGTAAACGTGAACGCGGCTTTCCCTGATCATTGCCGCGATGAGGAGATACTGAACGTGAGCGGTGATGAGTTGTTCTTTGCTGTTCTGGCACAGTTAATGTTGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr6:72258125|72292046 FUS 0 1 0
chr6:72258125|72292046 U2AF2 0 1 0
chr6:72258125|72292046 TAF15 0 2 0
chr6:72258125|72292046 NUDT21 1 0 0
chr6:72258125|72292046 HNRNPC 0 1 0
chr6:72258125|72292046 FBL 1 0 0