CircNet

General Information

circRNA Basic Information

CircID	chr6:75621532\|75640704
Strand	+
CircType	exon
Host Gene	ENSG00000112701.17;
Algorism	CIRI2;find_circ;DCC;
Sequence	CTTTGGCTAGATCAGAGTCTAAGAGAGATGGAGGTTTTAAAAATAATTGGAGCTTTGATCATGAAGAAGAAAGTGAAGGAGATACAGATAAAGAGCATTCTGTTCAGGCAGCAATTTGGAAATCCACCATTTATCATGAGTGCTTCACTTCTGTCTGGGCAACAGCTCCGTTCATCATTACCACTTTATGTGCCTTCACCGATGAGATGTTGATTTGAAGTTTTATTTGAAGGAGAGCTTTGAACTGTGAAAATACGCAAAATACGTCATTATGTTCTGGAACTGTAGTTCATGGTAGACGTTTTCATCATGCTCATGCACAGATACCAGTAGTAAAAACAGCAGCCCAAAGCAGTCTGGACCGAAAAGAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:75621532\|75640704	hsa-miR-198	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:75621532\|75640704
ORF Type	ORF1
Protein Length	62
Nucleotide Length	186
Protein Sequence	MEVLKIIGALIMKKKVKEIQIKSILFRQQFGNPPFIMSASLLSGQQLRSSLPLYVPSPMRC*
Nucleotide Sequence	ATGGAGGTTTTAAAAATAATTGGAGCTTTGATCATGAAGAAGAAAGTGAAGGAGATACAGATAAAGAGCATTCTGTTCAGGCAGCAATTTGGAAATCCACCATTTATCATGAGTGCTTCACTTCTGTCTGGGCAACAGCTCCGTTCATCATTACCACTTTATGTGCCTTCACCGATGAGATGTTGA

CircID	chr6:75621532\|75640704
ORF Type	ORF2
Protein Length	42
Nucleotide Length	126
Protein Sequence	MINGGFPNCCLNRMLFICISFTFFFMIKAPIIFKTSISLRL*
Nucleotide Sequence	ATGATAAATGGTGGATTTCCAAATTGCTGCCTGAACAGAATGCTCTTTATCTGTATCTCCTTCACTTTCTTCTTCATGATCAAAGCTCCAATTATTTTTAAAACCTCCATCTCTCTTAGACTCTGA

CircID	chr6:75621532\|75640704
ORF Type	ORF3
Protein Length	72
Nucleotide Length	216
Protein Sequence	LARSESKRDGGFKNNWSFDHEEESEGDTDKEHSVQAAIWKSTIYHECFTSVWATAPFIITTLCAFTDEMLI*
Nucleotide Sequence	TTGGCTAGATCAGAGTCTAAGAGAGATGGAGGTTTTAAAAATAATTGGAGCTTTGATCATGAAGAAGAAAGTGAAGGAGATACAGATAAAGAGCATTCTGTTCAGGCAGCAATTTGGAAATCCACCATTTATCATGAGTGCTTCACTTCTGTCTGGGCAACAGCTCCGTTCATCATTACCACTTTATGTGCCTTCACCGATGAGATGTTGATTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:75621532\|75640704	RBM5	1	0	0
chr6:75621532\|75640704	KHSRP	0	5	0
chr6:75621532\|75640704	MOV10	0	1	0
chr6:75621532\|75640704	ELAVL1	7	7	1
chr6:75621532\|75640704	NUMA1	0	3	0
chr6:75621532\|75640704	SF3B4	1	1	0
chr6:75621532\|75640704	FAM120A	0	2	1
chr6:75621532\|75640704	KHDRBS1	0	3	0
chr6:75621532\|75640704	CELF2	1	1	0
chr6:75621532\|75640704	NOP56	0	4	0
chr6:75621532\|75640704	PRPF8	0	3	1
chr6:75621532\|75640704	TAF15	0	1	0
chr6:75621532\|75640704	FMR1	0	0	3
chr6:75621532\|75640704	CPSF6	0	1	1
chr6:75621532\|75640704	TIA1	0	2	0
chr6:75621532\|75640704	AGO2	0	1	1
chr6:75621532\|75640704	DGCR8	0	1	0
chr6:75621532\|75640704	SRSF7	0	1	0
chr6:75621532\|75640704	SRSF1	0	2	3
chr6:75621532\|75640704	NOP58	3	2	2
chr6:75621532\|75640704	SRSF3	1	0	0
chr6:75621532\|75640704	U2AF1	0	6	0
chr6:75621532\|75640704	U2AF2	3	35	6
chr6:75621532\|75640704	SRSF9	1	0	1
chr6:75621532\|75640704	HNRNPU	0	1	0
chr6:75621532\|75640704	DDX54	0	1	14
chr6:75621532\|75640704	RBM10	0	2	0
chr6:75621532\|75640704	HNRNPL	0	3	0
chr6:75621532\|75640704	HNRNPM	0	1	0
chr6:75621532\|75640704	SF3A3	0	2	1
chr6:75621532\|75640704	PCBP2	0	2	0
chr6:75621532\|75640704	PTBP1	1	0	1
chr6:75621532\|75640704	HNRNPC	3	4	0
chr6:75621532\|75640704	HNRNPD	0	1	0
chr6:75621532\|75640704	TRA2A	0	0	2
chr6:75621532\|75640704	ZNF184	0	0	2
chr6:75621532\|75640704	HNRNPA1	0	8	0
chr6:75621532\|75640704	DDX3X	0	0	1
chr6:75621532\|75640704	SMNDC1	2	4	2
chr6:75621532\|75640704	AUH	1	3	0
chr6:75621532\|75640704	ACIN1	2	0	6
chr6:75621532\|75640704	LIN28B	2	0	1
chr6:75621532\|75640704	LIN28A	0	1	0
chr6:75621532\|75640704	RANGAP1	0	1	0
chr6:75621532\|75640704	FXR1	0	0	1
chr6:75621532\|75640704	FXR2	1	0	0
chr6:75621532\|75640704	SND1	1	0	1
chr6:75621532\|75640704	IGF2BP1	0	0	2
chr6:75621532\|75640704	GTF2F1	0	1	0
chr6:75621532\|75640704	IGF2BP3	0	0	1
chr6:75621532\|75640704	IGF2BP2	0	7	8
chr6:75621532\|75640704	TARDBP	0	0	1
chr6:75621532\|75640704	AIFM1	0	1	0
chr6:75621532\|75640704	BUD13	1	1	1
chr6:75621532\|75640704	BCCIP	0	2	0
chr6:75621532\|75640704	RBM47	0	0	1
chr6:75621532\|75640704	SLTM	0	1	0
chr6:75621532\|75640704	DDX42	0	5	0
chr6:75621532\|75640704	CSTF2T	0	4	3
chr6:75621532\|75640704	DHX9	0	1	0
chr6:75621532\|75640704	SAFB2	0	0	1
chr6:75621532\|75640704	EIF4A3	3	4	4
chr6:75621532\|75640704	TIAL1	0	2	0
chr6:75621532\|75640704	HNRNPK	0	5	0
chr6:75621532\|75640704	ALKBH5	0	0	1
chr6:75621532\|75640704	ILF3	0	0	1
chr6:75621532\|75640704	FBL	2	3	2

CircRNA Information