CircNet

General Information

circRNA Basic Information

CircID	chr6:75879820\|75891306
Strand	+
CircType	exon
Host Gene	ENSG00000196586.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GGATGGTGTCTGTTTTGGACTTGATGCAGGGTGGTTACCCATCACGAGCTTCATTTCATGAACTCTACAACATGTACAAAAAGTATATGCCAGATAAACTTGCAAGATTGGATCCAAGACTATTTTGTAAGGCTTTGTTTAAAGCTTTGGGCTTAAATGAAAATGACTACAAGTTTGGGTTAACCAAAGTATTTTTTAGACCTGGCAAGTGAAAAACAAAATAAAATATCGAGCTGAAGCCTGCATTAAAATGCAAAAAACTATTCGAATGTGGCTTTGCAAGAGGAGACACAAACCTCGGAAACTTGAGATGGAAGCAAAGAGAAAACAAGAAGAAGAAGAGAGAAAGAAAAGGGAAGATGATGAAAAACGCATTCAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:75879820\|75891306	hsa-miR-127-5p	0	1	1
chr6:75879820\|75891306	hsa-miR-9-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:75879820\|75891306
ORF Type	ORF1
Protein Length	70
Nucleotide Length	210
Protein Sequence	MVSVLDLMQGGYPSRASFHELYNMYKKYMPDKLARLDPRLFCKALFKALGLNENDYKFGLTKVFFRPGK*
Nucleotide Sequence	ATGGTGTCTGTTTTGGACTTGATGCAGGGTGGTTACCCATCACGAGCTTCATTTCATGAACTCTACAACATGTACAAAAAGTATATGCCAGATAAACTTGCAAGATTGGATCCAAGACTATTTTGTAAGGCTTTGTTTAAAGCTTTGGGCTTAAATGAAAATGACTACAAGTTTGGGTTAACCAAAGTATTTTTTAGACCTGGCAAGTGA

CircID	chr6:75879820\|75891306
ORF Type	ORF2
Protein Length	60
Nucleotide Length	180
Protein Sequence	MRFSSSSLFFLSSSSCFLFASISSFRGLCLLLQSHIRIVFCILMQASARYFILFFTCQV*
Nucleotide Sequence	ATGCGTTTTTCATCATCTTCCCTTTTCTTTCTCTCTTCTTCTTCTTGTTTTCTCTTTGCTTCCATCTCAAGTTTCCGAGGTTTGTGTCTCCTCTTGCAAAGCCACATTCGAATAGTTTTTTGCATTTTAATGCAGGCTTCAGCTCGATATTTTATTTTGTTTTTCACTTGCCAGGTCTAA

CircID	chr6:75879820\|75891306
ORF Type	ORF3
Protein Length	43
Nucleotide Length	129
Protein Sequence	MQKTIRMWLCKRRHKPRKLEMEAKRKQEEEERKKREDDEKRIQ
Nucleotide Sequence	ATGCAAAAAACTATTCGAATGTGGCTTTGCAAGAGGAGACACAAACCTCGGAAACTTGAGATGGAAGCAAAGAGAAAACAAGAAGAAGAAGAGAGAAAGAAAAGGGAAGATGATGAAAAACGCATTCAA

CircID	chr6:75879820\|75891306
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MNSTTCTKSICQINLQDWIQDYFVRLCLKLWA*
Nucleotide Sequence	ATGAACTCTACAACATGTACAAAAAGTATATGCCAGATAAACTTGCAAGATTGGATCCAAGACTATTTTGTAAGGCTTTGTTTAAAGCTTTGGGCTTAA

CircID	chr6:75879820\|75891306
ORF Type	ORF5
Protein Length	71
Nucleotide Length	213
Protein Sequence	LNAFFIIFPFLSLFFFLFSLCFHLKFPRFVSPLAKPHSNSFLHFNAGFSSIFYFVFHLPGLKNTLVNPNL*
Nucleotide Sequence	TTGAATGCGTTTTTCATCATCTTCCCTTTTCTTTCTCTCTTCTTCTTCTTGTTTTCTCTTTGCTTCCATCTCAAGTTTCCGAGGTTTGTGTCTCCTCTTGCAAAGCCACATTCGAATAGTTTTTTGCATTTTAATGCAGGCTTCAGCTCGATATTTTATTTTGTTTTTCACTTGCCAGGTCTAAAAAATACTTTGGTTAACCCAAACTTGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:75879820\|75891306	NOP56	0	0	1
chr6:75879820\|75891306	ELAVL1	2	0	1
chr6:75879820\|75891306	SF3B4	1	0	0
chr6:75879820\|75891306	PRPF8	0	1	0
chr6:75879820\|75891306	UPF1	0	1	0
chr6:75879820\|75891306	TAF15	2	0	0
chr6:75879820\|75891306	FMR1	0	2	4
chr6:75879820\|75891306	CPSF6	0	0	2
chr6:75879820\|75891306	DGCR8	3	0	0
chr6:75879820\|75891306	SRSF7	0	0	1
chr6:75879820\|75891306	SRSF1	0	1	1
chr6:75879820\|75891306	NOP58	0	2	2
chr6:75879820\|75891306	U2AF2	1	1	3
chr6:75879820\|75891306	DDX54	1	4	15
chr6:75879820\|75891306	RBM10	2	0	0
chr6:75879820\|75891306	TRA2A	0	3	5
chr6:75879820\|75891306	ZNF184	0	0	1
chr6:75879820\|75891306	LIN28B	1	0	2
chr6:75879820\|75891306	FXR1	0	0	1
chr6:75879820\|75891306	IGF2BP1	0	0	1
chr6:75879820\|75891306	IGF2BP2	0	0	3
chr6:75879820\|75891306	BUD13	0	1	1
chr6:75879820\|75891306	RBM47	0	0	1
chr6:75879820\|75891306	EIF4G2	0	0	1
chr6:75879820\|75891306	CSTF2T	1	1	3
chr6:75879820\|75891306	DKC1	0	1	0
chr6:75879820\|75891306	EIF4A3	1	0	5
chr6:75879820\|75891306	FBL	1	0	1

CircRNA Information