CircNet

General Information

circRNA Basic Information

CircID	chr6:7882628\|7882815
Strand	+
CircType	exon
Host Gene	ENSG00000259040.4;
Algorism	CIRI2;
Sequence	TATTTGTGGCTCCTGAGTTGAGTGATTTTGGTGAAAGAAAGCACATCCAAAGCATAGTTTACCTGCCCACGAGTTCTGGAAAGGTGGCCTTGTGGCAGTATTGACGTTCCTCTGATCTTAAGGTCACAGTTGACTCAATACTGTGTTGGTCCGTAGCATGGAGCAGATTGAAATGCAAAAACCCACAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:7882628\|7882815	hsa-miR-33a-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-33a-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-197-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-197-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-200b-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-200b-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-144-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-144-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-200c-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-200c-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-34b-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-34b-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-383-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-383-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-429	0	0	1
chr6:7882628\|7882815	hsa-miR-507	0	0	1
chr6:7882628\|7882815	hsa-miR-510-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-510-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-557	0	0	1
chr6:7882628\|7882815	hsa-miR-627-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-627-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-629-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-629-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-33b-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-33b-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-636	0	0	1
chr6:7882628\|7882815	hsa-miR-129-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-525-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-767-3p	0	0	1
chr6:7882628\|7882815	hsa-miR-520a-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-450b-5p	0	0	1
chr6:7882628\|7882815	hsa-miR-218	0	0	1
chr6:7882628\|7882815	hsa-miR-4736	0	1	0
chr6:7882628\|7882815	hsa-miR-4788	0	1	0
chr6:7882628\|7882815	hsa-miR-8063	0	1	0
chr6:7882628\|7882815	hsa-miR-668-3p	1	1	0
chr6:7882628\|7882815	hsa-miR-6759-5p	1	0	0
chr6:7882628\|7882815	hsa-miR-1228-5p	1	0	0
chr6:7882628\|7882815	hsa-miR-3664-3p	0	1	0
chr6:7882628\|7882815	hsa-miR-3064-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:7882628\|7882815
ORF Type	ORF1
Protein Length	26
Nucleotide Length	81
Protein Sequence	MERWPCGSIDVPLILRSQLTQYCVGP
Nucleotide Sequence	CTGGAAAGGTGGCCTTGTGGCAGTATTGACGTTCCTCTGATCTTAAGGTCACAGTTGACTCAATACTGTGTTGGTCCGTAG

CircID	chr6:7882628\|7882815
ORF Type	ORF2
Protein Length	28
Nucleotide Length	87
Protein Sequence	MSDFGERKHIQSIVYLPTSSGKVALWQY
Nucleotide Sequence	TTGAGTGATTTTGGTGAAAGAAAGCACATCCAAAGCATAGTTTACCTGCCCACGAGTTCTGGAAAGGTGGCCTTGTGGCAGTATTGA

CircID	chr6:7882628\|7882815
ORF Type	ORF3
Protein Length	32
Nucleotide Length	96
Protein Sequence	MPQGHLSRTRGQVNYALDVLSFTKITQLRSHK
Nucleotide Sequence	CTGCCACAAGGCCACCTTTCCAGAACTCGTGGGCAGGTAAACTATGCTTTGGATGTGCTTTCTTTCACCAAAATCACTCAACTCAGGAGCCACAAA

CircID	chr6:7882628\|7882815
ORF Type	ORF4
Protein Length	39
Nucleotide Length	120
Protein Sequence	MHFNLLHATDQHSIESTVTLRSEERQYCHKATFPELVGR
Nucleotide Sequence	TTGCATTTCAATCTGCTCCATGCTACGGACCAACACAGTATTGAGTCAACTGTGACCTTAAGATCAGAGGAACGTCAATACTGCCACAAGGCCACCTTTCCAGAACTCGTGGGCAGGTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information