CircRNA Information

General Information
circRNA Basic Information
CircID chr6:81752431|81752660
Strand -
CircType exon
Host Gene ENSG00000112773.14;
Algorism CIRI2;
Sequence CTGGAGGCGGCCGCCCCTTCTAGGAGCGCAGCGAGCGAGAGCGAAACCGAGAGGCGGCAACACTTCCAGGAGCTGCGAGCGCGCTCAGACAGCAAATAGCGACTTCGTCTTTCCCAGACCCCTGCCGCCTGCGCTCACCACTCCCTCCCCGCGACCCCTCCTGCGCCGCTGCCACCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTGCTGCCACACACGCTCGTGTCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:81752431|81752660 hsa-miR-335-5p 0 0 1
chr6:81752431|81752660 hsa-miR-335-3p 0 0 1
chr6:81752431|81752660 hsa-miR-608 1 1 1
chr6:81752431|81752660 hsa-miR-626 0 0 1
chr6:81752431|81752660 hsa-miR-639 0 1 1
chr6:81752431|81752660 hsa-miR-1281 0 0 1
chr6:81752431|81752660 hsa-miR-885-3p 1 1 1
chr6:81752431|81752660 hsa-miR-339-3p 0 0 1
chr6:81752431|81752660 hsa-miR-1207-3p 0 0 1
chr6:81752431|81752660 hsa-miR-1207-5p 1 1 1
chr6:81752431|81752660 hsa-miR-342-5p 0 0 1
chr6:81752431|81752660 hsa-miR-644 0 0 1
chr6:81752431|81752660 hsa-miR-720 0 0 1
chr6:81752431|81752660 hsa-miR-147 0 0 1
chr6:81752431|81752660 hsa-miR-602 1 0 0
chr6:81752431|81752660 hsa-miR-638 1 1 0
chr6:81752431|81752660 hsa-miR-1268a 1 0 0
chr6:81752431|81752660 hsa-miR-3141 1 0 0
chr6:81752431|81752660 hsa-miR-3154 1 0 0
chr6:81752431|81752660 hsa-miR-3196 1 0 0
chr6:81752431|81752660 hsa-miR-3197 1 0 0
chr6:81752431|81752660 hsa-miR-4281 1 0 0
chr6:81752431|81752660 hsa-miR-3615 0 1 0
chr6:81752431|81752660 hsa-miR-3621 1 0 0
chr6:81752431|81752660 hsa-miR-3937 0 1 0
chr6:81752431|81752660 hsa-miR-1268b 1 0 0
chr6:81752431|81752660 hsa-miR-4449 1 0 0
chr6:81752431|81752660 hsa-miR-4467 1 0 0
chr6:81752431|81752660 hsa-miR-4498 1 0 0
chr6:81752431|81752660 hsa-miR-2392 1 0 0
chr6:81752431|81752660 hsa-miR-4510 0 1 0
chr6:81752431|81752660 hsa-miR-3960 1 1 0
chr6:81752431|81752660 hsa-miR-4651 1 1 0
chr6:81752431|81752660 hsa-miR-4660 0 1 0
chr6:81752431|81752660 hsa-miR-4706 1 1 0
chr6:81752431|81752660 hsa-miR-4710 1 0 0
chr6:81752431|81752660 hsa-miR-4721 1 0 0
chr6:81752431|81752660 hsa-miR-4739 1 0 0
chr6:81752431|81752660 hsa-miR-4748 1 0 0
chr6:81752431|81752660 hsa-miR-5194 1 1 0
chr6:81752431|81752660 hsa-miR-5572 1 0 0
chr6:81752431|81752660 hsa-miR-5787 1 0 0
chr6:81752431|81752660 hsa-miR-6085 1 0 0
chr6:81752431|81752660 hsa-miR-6127 1 1 0
chr6:81752431|81752660 hsa-miR-6129 0 1 0
chr6:81752431|81752660 hsa-miR-6130 0 1 0
chr6:81752431|81752660 hsa-miR-6165 1 0 0
chr6:81752431|81752660 hsa-miR-7704 1 1 0
chr6:81752431|81752660 hsa-miR-8072 1 0 0
chr6:81752431|81752660 hsa-miR-8089 1 0 0
chr6:81752431|81752660 hsa-miR-12115 1 0 0
chr6:81752431|81752660 hsa-miR-4433b-3p 1 0 0
chr6:81752431|81752660 hsa-miR-504-3p 1 0 0
chr6:81752431|81752660 hsa-miR-6747-5p 1 0 0
chr6:81752431|81752660 hsa-miR-4433a-3p 1 0 0
chr6:81752431|81752660 hsa-miR-6825-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6799-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6510-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6728-5p 1 0 0
chr6:81752431|81752660 hsa-miR-4695-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6867-5p 0 1 0
chr6:81752431|81752660 hsa-miR-4722-5p 1 1 0
chr6:81752431|81752660 hsa-miR-1301-3p 1 1 0
chr6:81752431|81752660 hsa-miR-6820-5p 0 1 0
chr6:81752431|81752660 hsa-miR-6727-5p 1 1 0
chr6:81752431|81752660 hsa-miR-3180-3p 0 1 0
chr6:81752431|81752660 hsa-miR-6732-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6798-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6760-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6782-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6882-3p 1 0 0
chr6:81752431|81752660 hsa-miR-185-5p 1 0 0
chr6:81752431|81752660 hsa-miR-204-3p 0 1 0
chr6:81752431|81752660 hsa-miR-193b-5p 1 0 0
chr6:81752431|81752660 hsa-miR-1908-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6771-5p 1 0 0
chr6:81752431|81752660 hsa-miR-92b-5p 1 0 0
chr6:81752431|81752660 hsa-miR-4787-5p 1 0 0
chr6:81752431|81752660 hsa-miR-149-3p 1 1 0
chr6:81752431|81752660 hsa-miR-6789-5p 1 0 0
chr6:81752431|81752660 hsa-miR-423-5p 1 0 0
chr6:81752431|81752660 hsa-miR-3120-5p 0 1 0
chr6:81752431|81752660 hsa-miR-4632-3p 1 0 0
chr6:81752431|81752660 hsa-miR-2277-5p 1 0 0
chr6:81752431|81752660 hsa-miR-10400-5p 1 1 0
chr6:81752431|81752660 hsa-miR-4763-3p 1 1 0
chr6:81752431|81752660 hsa-miR-6787-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6812-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6865-5p 1 1 0
chr6:81752431|81752660 hsa-miR-3180 0 1 0
chr6:81752431|81752660 hsa-miR-6737-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6752-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6754-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6756-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6803-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6819-5p 1 1 0
chr6:81752431|81752660 hsa-miR-7110-5p 1 0 0
chr6:81752431|81752660 hsa-miR-11181-3p 1 0 0
chr6:81752431|81752660 hsa-miR-1249-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6722-3p 1 1 0
chr6:81752431|81752660 hsa-miR-6751-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6779-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6797-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6808-5p 1 0 0
chr6:81752431|81752660 hsa-miR-4728-5p 1 1 0
chr6:81752431|81752660 hsa-miR-5196-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6836-5p 1 0 0
chr6:81752431|81752660 hsa-miR-1237-5p 1 0 0
chr6:81752431|81752660 hsa-miR-1909-3p 1 0 0
chr6:81752431|81752660 hsa-miR-328-5p 1 0 0
chr6:81752431|81752660 hsa-miR-4749-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6738-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6777-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6795-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6846-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6848-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6858-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6883-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6887-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6889-5p 1 0 0
chr6:81752431|81752660 hsa-miR-939-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6511b-5p 0 1 0
chr6:81752431|81752660 hsa-miR-6739-5p 0 1 0
chr6:81752431|81752660 hsa-miR-1914-3p 1 1 0
chr6:81752431|81752660 hsa-miR-6855-5p 1 0 0
chr6:81752431|81752660 hsa-miR-4646-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6891-5p 1 0 0
chr6:81752431|81752660 hsa-miR-6785-5p 1 1 0
chr6:81752431|81752660 hsa-miR-6876-3p 0 1 0
chr6:81752431|81752660 hsa-miR-6733-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr6:81752431|81752660
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence LEAAAPSRSAASESETERRQHFQELRARSDSK
Nucleotide Sequence CTGGAGGCGGCCGCCCCTTCTAGGAGCGCAGCGAGCGAGAGCGAAACCGAGAGGCGGCAACACTTCCAGGAGCTGCGAGCGCGCTCAGACAGCAAATAG
CircID chr6:81752431|81752660
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MPPALTTPSPRPLLRRCHPSCGGPELAALAATHARV
Nucleotide Sequence CTGCCGCCTGCGCTCACCACTCCCTCCCCGCGACCCCTCCTGCGCCGCTGCCACCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTGCTGCCACACACGCTCGTGTC
CircID chr6:81752431|81752660
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MRSPLPPRDPSCAAATPAAVVPNWRLLLPHTLVS
Nucleotide Sequence CTGCGCTCACCACTCCCTCCCCGCGACCCCTCCTGCGCCGCTGCCACCCCAGCTGCGGTGGTCCCGAACTGGCGGCTCTTGCTGCCACACACGCTCGTGTCT
CircID chr6:81752431|81752660
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MLSERARSSWKCCRLSVSLSLAALLEGAAAS
Nucleotide Sequence TTGCTGTCTGAGCGCGCTCGCAGCTCCTGGAAGTGTTGCCGCCTCTCGGTTTCGCTCTCGCTCGCTGCGCTCCTAGAAGGGGCGGCCGCCTCC
CircID chr6:81752431|81752660
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MGWQRRRRGRGEGVVSAGGRGLGKTKSLFAV
Nucleotide Sequence CTGGGGTGGCAGCGGCGCAGGAGGGGTCGCGGGGAGGGAGTGGTGAGCGCAGGCGGCAGGGGTCTGGGAAAGACGAAGTCGCTATTTGCTGTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab