CircNet

General Information

circRNA Basic Information

CircID	chr6:87541918\|87569590
Strand	-
CircType	exon
Host Gene	ENSG00000146282.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGATCACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATCCTCTACAGCATCTCTTTGAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:87541918\|87569590	hsa-miR-29a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:87541918\|87569590
ORF Type	ORF1
Protein Length	189
Nucleotide Length	567
Protein Sequence	VLNLPPENLITSISAVPISQKEEVADFQLSVDSLLEKDNDHSRPDIQVQAKRLAEKLRCDTVVSEISTGQRTVNFKINRELLTKTVLQQVIEDGSKYGLKSELFSGLPQKKIVVEFSSPNVAKKFHVGHLRSTIIGNFIANLKEALGHQVIRINYLGDWGMQFGLLGTGFQLFGYEEKLQSNPLQHLFE
Nucleotide Sequence	GTGTTGAATCTTCCACCAGAAAACTTGATCACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTATTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGTGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAAGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCCAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATCCTCTACAGCATCTCTTTGAA

CircID	chr6:87541918\|87569590
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	LATLGELNSTTIFFWGSPEKSSLFNPYFEPSSITCCSTVFVKSSLFILKFTVL*
Nucleotide Sequence	TTGGCAACATTAGGTGAACTGAATTCAACCACAATCTTCTTCTGGGGAAGTCCAGAGAAAAGTTCACTTTTTAATCCATATTTTGAGCCATCTTCAATTACTTGTTGTAGCACTGTCTTTGTTAAGAGCTCTCTGTTTATTTTGAAATTTACAGTCCTTTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:87541918\|87569590	U2AF2	3	5	3
chr6:87541918\|87569590	ELAVL1	9	6	2
chr6:87541918\|87569590	ELAVL3	1	0	0
chr6:87541918\|87569590	SF3B4	0	0	1
chr6:87541918\|87569590	CELF2	1	0	0
chr6:87541918\|87569590	PRPF8	0	1	0
chr6:87541918\|87569590	TAF15	1	1	0
chr6:87541918\|87569590	FUS	0	1	0
chr6:87541918\|87569590	SRSF7	0	0	1
chr6:87541918\|87569590	SRSF1	0	0	1
chr6:87541918\|87569590	NOP58	1	1	9
chr6:87541918\|87569590	U2AF1	0	0	1
chr6:87541918\|87569590	NOP56	0	0	1
chr6:87541918\|87569590	DDX54	0	0	17
chr6:87541918\|87569590	HNRNPM	0	1	0
chr6:87541918\|87569590	DDX3X	0	0	1
chr6:87541918\|87569590	ACIN1	2	0	7
chr6:87541918\|87569590	IGF2BP1	0	0	2
chr6:87541918\|87569590	IGF2BP3	0	0	3
chr6:87541918\|87569590	IGF2BP2	1	2	11
chr6:87541918\|87569590	TARDBP	0	3	0
chr6:87541918\|87569590	CSTF2T	0	0	2
chr6:87541918\|87569590	TARBP2	0	1	1
chr6:87541918\|87569590	FBL	0	0	7
chr6:87541918\|87569590	EIF4A3	1	0	10
chr6:87541918\|87569590	AGO2	0	0	1

CircRNA Information