CircNet

General Information

circRNA Basic Information

CircID	chr6:99410741\|99410947
Strand	-
CircType	3-utr
Host Gene	ENSG00000132424.14;
Algorism	CIRI2;
Sequence	CAACCCCCACACCCCCCTCCAGATCAGCCATGGATGCCACCAACACCAGGCCCAATGGACATTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr6:99410741\|99410947	hsa-miR-212-5p	0	0	1
chr6:99410741\|99410947	hsa-miR-212-3p	0	0	1
chr6:99410741\|99410947	hsa-miR-132-5p	0	0	1
chr6:99410741\|99410947	hsa-miR-132-3p	0	0	1
chr6:99410741\|99410947	hsa-miR-507	0	0	1
chr6:99410741\|99410947	hsa-miR-557	0	0	1
chr6:99410741\|99410947	hsa-miR-1237-5p	0	0	1
chr6:99410741\|99410947	hsa-miR-1237-3p	0	0	1
chr6:99410741\|99410947	hsa-miR-1248	0	0	1
chr6:99410741\|99410947	hsa-miR-9-5p	0	1	1
chr6:99410741\|99410947	hsa-miR-210-5p	0	1	1
chr6:99410741\|99410947	hsa-miR-491-5p	0	1	1
chr6:99410741\|99410947	hsa-miR-490-5p	0	0	1
chr6:99410741\|99410947	hsa-miR-450b-5p	0	0	1
chr6:99410741\|99410947	hsa-miR-590-3p	0	0	1
chr6:99410741\|99410947	hsa-miR-9	0	0	1
chr6:99410741\|99410947	hsa-miR-549	0	0	1
chr6:99410741\|99410947	hsa-miR-2110	0	1	0
chr6:99410741\|99410947	hsa-miR-4326	0	1	0
chr6:99410741\|99410947	hsa-miR-4436a	0	1	0
chr6:99410741\|99410947	hsa-miR-4489	1	1	0
chr6:99410741\|99410947	hsa-miR-8071	1	0	0
chr6:99410741\|99410947	hsa-miR-1227-5p	0	1	0
chr6:99410741\|99410947	hsa-miR-3151-5p	1	1	0
chr6:99410741\|99410947	hsa-miR-6868-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-6810-5p	1	0	0
chr6:99410741\|99410947	hsa-miR-6786-5p	1	1	0
chr6:99410741\|99410947	hsa-miR-4640-5p	0	1	0
chr6:99410741\|99410947	hsa-miR-4715-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-4733-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-194-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-4776-5p	0	1	0
chr6:99410741\|99410947	hsa-miR-7112-5p	1	0	0
chr6:99410741\|99410947	hsa-miR-3120-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-654-5p	1	0	0
chr6:99410741\|99410947	hsa-miR-1911-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-3619-3p	1	0	0
chr6:99410741\|99410947	hsa-miR-6887-3p	1	0	0
chr6:99410741\|99410947	hsa-miR-5000-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-1288-5p	0	1	0
chr6:99410741\|99410947	hsa-miR-6859-3p	1	0	0
chr6:99410741\|99410947	hsa-miR-1296-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-6798-3p	0	1	0
chr6:99410741\|99410947	hsa-miR-6756-5p	1	0	0
chr6:99410741\|99410947	hsa-miR-10396b-5p	1	0	0
chr6:99410741\|99410947	hsa-miR-4726-5p	0	1	0
chr6:99410741\|99410947	hsa-miR-4745-5p	1	0	0
chr6:99410741\|99410947	hsa-miR-6762-5p	0	1	0
chr6:99410741\|99410947	hsa-miR-21-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr6:99410741\|99410947
ORF Type	ORF1
Protein Length	58
Nucleotide Length	174
Protein Sequence	MPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGPVNQFDYQ
Nucleotide Sequence	ATGCCACCAACACCAGGCCCAATGGACATTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAG

CircID	chr6:99410741\|99410947
ORF Type	ORF2
Protein Length	42
Nucleotide Length	126
Protein Sequence	MPVVRGKFPTVLTVAVFRRRNNVHWAWCWWHPWLIWRGVWGL
Nucleotide Sequence	ATGCCTGTTGTCAGGGGCAAATTCCCCACTGTCCTGACTGTTGCTGTCTTCAGAAGGAGGAACAATGTCCATTGGGCCTGGTGTTGGTGGCATCCATGGCTGATCTGGAGGGGGGTGTGGGGGTTG

CircID	chr6:99410741\|99410947
ORF Type	ORF1
Protein Length	69
Nucleotide Length	207
Protein Sequence	LIVKLVHWPHCKIIGWSTKVVIVLVKYMPVVRGKFPTVLTVAVFRRRNNVHWAWCWWHPWLIWRGVWGL
Nucleotide Sequence	CTGATAGTCAAACTGGTTCACTGGCCCCACTGCAAAATTATCGGGTGGTCCACCAAAGTTGTGATTGTTCTGGTTAAATATATGCCTGTTGTCAGGGGCAAATTCCCCACTGTCCTGACTGTTGCTGTCTTCAGAAGGAGGAACAATGTCCATTGGGCCTGGTGTTGGTGGCATCCATGGCTGATCTGGAGGGGGGTGTGGGGGTTG

CircID	chr6:99410741\|99410947
ORF Type	ORF2
Protein Length	58
Nucleotide Length	174
Protein Sequence	MPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGPVNQFDYQ
Nucleotide Sequence	ATGCCACCAACACCAGGCCCAATGGACATTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGAACCAGTTTGACTATCAG

CircID	chr6:99410741\|99410947
ORF Type	ORF3
Protein Length	42
Nucleotide Length	129
Protein Sequence	MFLLLKTATVRTVGNLPLTTGIYLTRTITTLVDHPIILQWGQ
Nucleotide Sequence	TTGTTCCTCCTTCTGAAGACAGCAACAGTCAGGACAGTGGGGAATTTGCCCCTGACAACAGGCATATATTTAACCAGAACAATCACAACTTTGGTGGACCACCCGATAATTTTGCAGTGGGGCCAGTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr6:99410741\|99410947	U2AF2	39	20	4
chr6:99410741\|99410947	MOV10	10	6	0
chr6:99410741\|99410947	PRPF8	2	4	3
chr6:99410741\|99410947	TROVE2	1	0	0
chr6:99410741\|99410947	GNL3	0	1	0
chr6:99410741\|99410947	DGCR8	4	3	4
chr6:99410741\|99410947	PTBP1	1	1	3
chr6:99410741\|99410947	DDX3X	0	1	0
chr6:99410741\|99410947	LARP7	1	0	0
chr6:99410741\|99410947	ACIN1	0	0	4
chr6:99410741\|99410947	RANGAP1	3	0	3
chr6:99410741\|99410947	FXR1	1	1	1
chr6:99410741\|99410947	FXR2	0	0	3
chr6:99410741\|99410947	BUD13	1	0	2
chr6:99410741\|99410947	GTF2F1	0	1	0
chr6:99410741\|99410947	RBM47	3	0	1
chr6:99410741\|99410947	SLTM	1	2	2
chr6:99410741\|99410947	EIF4G2	2	2	2
chr6:99410741\|99410947	DDX42	4	1	2
chr6:99410741\|99410947	CSTF2T	6	3	2
chr6:99410741\|99410947	YWHAG	0	0	1
chr6:99410741\|99410947	RNF219	2	1	1
chr6:99410741\|99410947	TIAL1	0	1	0
chr6:99410741\|99410947	ELAVL1	15	12	2
chr6:99410741\|99410947	ELAVL3	1	0	0
chr6:99410741\|99410947	KHDRBS1	1	0	0
chr6:99410741\|99410947	CELF2	3	1	0
chr6:99410741\|99410947	VIM	0	0	1
chr6:99410741\|99410947	SRSF7	0	0	2
chr6:99410741\|99410947	SRSF1	5	0	6
chr6:99410741\|99410947	U2AF1	6	0	5
chr6:99410741\|99410947	KHSRP	5	7	0
chr6:99410741\|99410947	SRSF9	0	1	2
chr6:99410741\|99410947	DDX54	4	0	5
chr6:99410741\|99410947	PCBP2	1	0	0
chr6:99410741\|99410947	SF3A3	3	0	0
chr6:99410741\|99410947	ZNF184	1	0	2
chr6:99410741\|99410947	XRN2	3	2	2
chr6:99410741\|99410947	LIN28B	4	2	2
chr6:99410741\|99410947	LIN28A	1	1	0
chr6:99410741\|99410947	BCCIP	0	0	2
chr6:99410741\|99410947	FTO	0	1	0
chr6:99410741\|99410947	RBFOX2	1	0	3
chr6:99410741\|99410947	RBM27	2	0	0
chr6:99410741\|99410947	RBM22	0	1	0
chr6:99410741\|99410947	AIFM1	1	0	1
chr6:99410741\|99410947	AGO1	6	1	0
chr6:99410741\|99410947	AGO3	1	0	0
chr6:99410741\|99410947	AGO2	11	5	0
chr6:99410741\|99410947	FAM120A	6	1	4
chr6:99410741\|99410947	CNBP	1	0	0
chr6:99410741\|99410947	UPF1	36	10	0
chr6:99410741\|99410947	TAF15	3	6	0
chr6:99410741\|99410947	FUS	5	1	0
chr6:99410741\|99410947	HNRNPU	3	8	0
chr6:99410741\|99410947	HNRNPK	4	2	0
chr6:99410741\|99410947	HNRNPL	0	1	0
chr6:99410741\|99410947	HNRNPM	0	1	0
chr6:99410741\|99410947	HNRNPC	17	1	0
chr6:99410741\|99410947	HNRNPD	1	2	0
chr6:99410741\|99410947	SMNDC1	5	0	1
chr6:99410741\|99410947	AUH	2	0	0
chr6:99410741\|99410947	HNRNPA1	7	4	0
chr6:99410741\|99410947	SND1	1	0	1
chr6:99410741\|99410947	IGF2BP1	4	1	5
chr6:99410741\|99410947	IGF2BP3	4	0	4
chr6:99410741\|99410947	IGF2BP2	7	4	10
chr6:99410741\|99410947	HNRNPUL1	4	5	0
chr6:99410741\|99410947	TARDBP	1	1	3
chr6:99410741\|99410947	YTHDC1	1	0	0
chr6:99410741\|99410947	DICER1	1	0	0
chr6:99410741\|99410947	RTCB	1	0	0
chr6:99410741\|99410947	FBL	3	1	2
chr6:99410741\|99410947	SF3B4	2	0	0
chr6:99410741\|99410947	FMR1	2	2	2
chr6:99410741\|99410947	CPSF6	3	0	1
chr6:99410741\|99410947	NOP58	6	2	2
chr6:99410741\|99410947	NOP56	3	3	0
chr6:99410741\|99410947	LSM11	0	1	0
chr6:99410741\|99410947	HNRNPA2B1	1	7	1
chr6:99410741\|99410947	TRA2A	0	1	6
chr6:99410741\|99410947	ZC3H7B	0	1	0
chr6:99410741\|99410947	RBM10	0	3	0
chr6:99410741\|99410947	MSI1	1	0	0
chr6:99410741\|99410947	NPM1	1	0	0
chr6:99410741\|99410947	TIA1	1	3	0
chr6:99410741\|99410947	NONO	0	0	1
chr6:99410741\|99410947	EIF4A3	3	5	3
chr6:99410741\|99410947	DKC1	0	1	0
chr6:99410741\|99410947	EWSR1	1	0	0
chr6:99410741\|99410947	ILF3	2	0	0

CircRNA Information