CircRNA Information

General Information
circRNA Basic Information
CircID chr6:99567527|99567841
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTTTTTCATGAATAAGTTCTTGTTTCTGTCAGTGACCATGTGAGAGCTAGAATAATATTAAAAACATTTATCCCTAAATACATTTGTTTAAGCAGGCAGGAAGGTGCGTTATGGGGTAAATTGAACATTTGAGTAGGCTTTCCACTGTATAGTTGAAAGATGAACAGAATTTGACAAGGTATCTTGGTATAATTTTTTATGCTAAGAAAGCATTAGTAAGTAATTTAAATTTCGATTCTGTGAATAGGATCTGTTCCTGATGTTCATTTTTTAGCCCTTTGCAAAGAGAAAAAAAGAAACAATGAACTCAGTAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr6:99567527|99567841 hsa-miR-27a-5p 0 0 1
chr6:99567527|99567841 hsa-miR-27a-3p 0 0 1
chr6:99567527|99567841 hsa-miR-27b-5p 0 0 1
chr6:99567527|99567841 hsa-miR-27b-3p 0 0 1
chr6:99567527|99567841 hsa-miR-155-5p 0 0 1
chr6:99567527|99567841 hsa-miR-155-3p 0 0 1
chr6:99567527|99567841 hsa-miR-433-5p 0 0 1
chr6:99567527|99567841 hsa-miR-433-3p 0 0 1
chr6:99567527|99567841 hsa-miR-527 0 0 1
chr6:99567527|99567841 hsa-miR-656-5p 0 0 1
chr6:99567527|99567841 hsa-miR-656-3p 0 0 1
chr6:99567527|99567841 hsa-miR-888-5p 0 0 1
chr6:99567527|99567841 hsa-miR-888-3p 0 0 1
chr6:99567527|99567841 hsa-miR-889-5p 0 0 1
chr6:99567527|99567841 hsa-miR-889-3p 0 0 1
chr6:99567527|99567841 hsa-miR-873-5p 0 0 1
chr6:99567527|99567841 hsa-miR-873-3p 0 0 1
chr6:99567527|99567841 hsa-miR-1206 0 0 1
chr6:99567527|99567841 hsa-miR-1305 0 1 1
chr6:99567527|99567841 hsa-miR-1284 0 0 1
chr6:99567527|99567841 hsa-miR-513a-5p 0 0 1
chr6:99567527|99567841 hsa-miR-518a-5p 0 0 1
chr6:99567527|99567841 hsa-miR-342-3p 0 0 1
chr6:99567527|99567841 hsa-miR-450b-5p 0 0 1
chr6:99567527|99567841 hsa-miR-105 0 0 1
chr6:99567527|99567841 hsa-miR-664 0 0 1
chr6:99567527|99567841 hsa-miR-2117 1 1 0
chr6:99567527|99567841 hsa-miR-4297 1 1 0
chr6:99567527|99567841 hsa-miR-3660 0 1 0
chr6:99567527|99567841 hsa-miR-3978 0 1 0
chr6:99567527|99567841 hsa-miR-12125 0 1 0
chr6:99567527|99567841 hsa-miR-6786-3p 1 0 0
chr6:99567527|99567841 hsa-miR-664b-5p 0 1 0
chr6:99567527|99567841 hsa-miR-24-1-5p 0 1 0
chr6:99567527|99567841 hsa-miR-2116-5p 0 1 0
chr6:99567527|99567841 hsa-miR-1185-1-3p 0 1 0
chr6:99567527|99567841 hsa-miR-1185-2-3p 0 1 0
chr6:99567527|99567841 hsa-miR-4661-5p 1 0 0
chr6:99567527|99567841 hsa-let-7f-2-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr6:99567527|99567841
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MKDEQNLTRYLGIIFYAKKALVSNLNFDSVNRICS
Nucleotide Sequence TTGAAAGATGAACAGAATTTGACAAGGTATCTTGGTATAATTTTTTATGCTAAGAAAGCATTAGTAAGTAATTTAAATTTCGATTCTGTGAATAGGATCTGTTCCTGA

CircID chr6:99567527|99567841
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MFIFQLYSGKPTQMFNLPHNAPSCLLKQMYLGINVFNIILALTWSLTETRTYS
Nucleotide Sequence CTGTTCATCTTTCAACTATACAGTGGAAAGCCTACTCAAATGTTCAATTTACCCCATAACGCACCTTCCTGCCTGCTTAAACAAATGTATTTAGGGATAAATGTTTTTAATATTATTCTAGCTCTCACATGGTCACTGACAGAAACAAGAACTTATTCATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites