CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100091423|100091794
Strand +
CircType exon
Host Gene ENSG00000168090.8;
Algorism CIRI2;
Sequence CCTCATCAGAAAAAGAGCCCGCGCATTCTCCTGCCGATGCCTTGTCGGTCGTAGAGGACATTGAACTTGTTCACAAACTGGTTCATGGTGTTGCACGTTTTGGTGATGGTGCCGAGGTAGGCCATGAGCCCCACGTCGTTGCATTGCTGGGAGGGAACAGAAAGGACCAGTTCCTCGGGATCCCTCGTGGCATGCCCGGGGAACAACAGTCCCCAGTCCTGCACGTGAAAGTGACAGCATAAGCCCCGCCTCCCCATCCGGGTTTTACACTCACATCATAAAAATCTGTCTTGAACTTGTCTGTGCTGAGCACCGGGAGACAGTGACACAGAGCATAGGCCTCCCGCAGGATCTCATGATTAAAGGGGACCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100091423|100091794 hsa-miR-592 0 0 1
chr7:100091423|100091794 hsa-miR-597-5p 0 0 1
chr7:100091423|100091794 hsa-miR-597-3p 0 0 1
chr7:100091423|100091794 hsa-miR-626 0 0 1
chr7:100091423|100091794 hsa-miR-758-5p 0 0 1
chr7:100091423|100091794 hsa-miR-758-3p 0 0 1
chr7:100091423|100091794 hsa-miR-668-5p 0 0 1
chr7:100091423|100091794 hsa-miR-668-3p 0 0 1
chr7:100091423|100091794 hsa-miR-891a-5p 0 0 1
chr7:100091423|100091794 hsa-miR-891a-3p 0 0 1
chr7:100091423|100091794 hsa-miR-744-5p 0 0 1
chr7:100091423|100091794 hsa-miR-744-3p 0 0 1
chr7:100091423|100091794 hsa-miR-939-5p 0 0 1
chr7:100091423|100091794 hsa-miR-939-3p 0 0 1
chr7:100091423|100091794 hsa-miR-1208 0 0 1
chr7:100091423|100091794 hsa-miR-1286 0 0 1
chr7:100091423|100091794 hsa-miR-1250-5p 0 0 1
chr7:100091423|100091794 hsa-miR-1250-3p 0 0 1
chr7:100091423|100091794 hsa-miR-1272 0 0 1
chr7:100091423|100091794 hsa-miR-1322 0 0 1
chr7:100091423|100091794 hsa-miR-767-5p 0 0 1
chr7:100091423|100091794 hsa-miR-574-5p 0 0 1
chr7:100091423|100091794 hsa-miR-582-3p 0 0 1
chr7:100091423|100091794 hsa-miR-642 0 0 1
chr7:100091423|100091794 hsa-miR-663 0 0 1
chr7:100091423|100091794 hsa-miR-637 1 0 0
chr7:100091423|100091794 hsa-miR-663a 1 0 0
chr7:100091423|100091794 hsa-miR-762 1 0 0
chr7:100091423|100091794 hsa-miR-1469 1 0 0
chr7:100091423|100091794 hsa-miR-3196 1 0 0
chr7:100091423|100091794 hsa-miR-4440 1 0 0
chr7:100091423|100091794 hsa-miR-4488 1 0 0
chr7:100091423|100091794 hsa-miR-4489 1 0 0
chr7:100091423|100091794 hsa-miR-4508 1 0 0
chr7:100091423|100091794 hsa-miR-4651 1 0 0
chr7:100091423|100091794 hsa-miR-4658 1 0 0
chr7:100091423|100091794 hsa-miR-4706 1 0 0
chr7:100091423|100091794 hsa-miR-4721 1 0 0
chr7:100091423|100091794 hsa-miR-5787 1 0 0
chr7:100091423|100091794 hsa-miR-6132 1 0 0
chr7:100091423|100091794 hsa-miR-92a-2-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6765-5p 1 0 0
chr7:100091423|100091794 hsa-miR-7106-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6825-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6799-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6089 1 0 0
chr7:100091423|100091794 hsa-miR-4722-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6721-5p 1 0 0
chr7:100091423|100091794 hsa-miR-185-3p 1 0 0
chr7:100091423|100091794 hsa-miR-6821-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6735-3p 1 0 0
chr7:100091423|100091794 hsa-miR-6786-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4783-3p 1 0 0
chr7:100091423|100091794 hsa-miR-1908-5p 1 0 0
chr7:100091423|100091794 hsa-miR-1228-5p 1 0 0
chr7:100091423|100091794 hsa-miR-3677-3p 1 0 0
chr7:100091423|100091794 hsa-miR-4743-5p 1 0 0
chr7:100091423|100091794 hsa-miR-149-3p 1 0 0
chr7:100091423|100091794 hsa-miR-6811-3p 1 0 0
chr7:100091423|100091794 hsa-miR-873-3p 1 0 0
chr7:100091423|100091794 hsa-miR-2277-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4740-3p 1 0 0
chr7:100091423|100091794 hsa-miR-10400-5p 1 0 0
chr7:100091423|100091794 hsa-miR-1233-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4763-3p 1 0 0
chr7:100091423|100091794 hsa-miR-6787-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6812-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6816-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6775-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6726-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6752-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6756-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6803-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6819-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6763-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6779-5p 1 0 0
chr7:100091423|100091794 hsa-miR-7111-5p 1 0 0
chr7:100091423|100091794 hsa-miR-5189-5p 1 0 0
chr7:100091423|100091794 hsa-miR-10396a-5p 1 0 0
chr7:100091423|100091794 hsa-miR-10396b-5p 1 0 0
chr7:100091423|100091794 hsa-miR-1237-5p 1 0 0
chr7:100091423|100091794 hsa-miR-328-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4745-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4749-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6858-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4697-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6885-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4758-5p 1 0 0
chr7:100091423|100091794 hsa-miR-10398-3p 1 0 0
chr7:100091423|100091794 hsa-miR-6785-5p 1 0 0
chr7:100091423|100091794 hsa-miR-6790-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4757-5p 1 0 0
chr7:100091423|100091794 hsa-miR-4756-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:100091423|100091794
ORF Type ORF1
Protein Length 34
Nucleotide Length 105
Protein Sequence MSPTSLHCWEGTERTSSSGSLVACPGNNSPQSCT
Nucleotide Sequence ATGAGCCCCACGTCGTTGCATTGCTGGGAGGGAACAGAAAGGACCAGTTCCTCGGGATCCCTCGTGGCATGCCCGGGGAACAACAGTCCCCAGTCCTGCACGTGA
CircID chr7:100091423|100091794
ORF Type ORF2
Protein Length 66
Nucleotide Length 201
Protein Sequence MSVVEDIELVHKLVHGVARFGDGAEVGHEPHVVALLGGNRKDQFLGIPRGMPGEQQSPVLHVKVTA
Nucleotide Sequence TTGTCGGTCGTAGAGGACATTGAACTTGTTCACAAACTGGTTCATGGTGTTGCACGTTTTGGTGATGGTGCCGAGGTAGGCCATGAGCCCCACGTCGTTGCATTGCTGGGAGGGAACAGAAAGGACCAGTTCCTCGGGATCCCTCGTGGCATGCCCGGGGAACAACAGTCCCCAGTCCTGCACGTGAAAGTGACAGCATAA
CircID chr7:100091423|100091794
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MRSCGRPMLCVTVSRCSAQTSSRQIFMM
Nucleotide Sequence ATGAGATCCTGCGGGAGGCCTATGCTCTGTGTCACTGTCTCCCGGTGCTCAGCACAGACAAGTTCAAGACAGATTTTTATGATGTGA
CircID chr7:100091423|100091794
ORF Type ORF4
Protein Length 80
Nucleotide Length 240
Protein Sequence MLSLSRAGLGTVVPRACHEGSRGTGPFCSLPAMQRRGAHGLPRHHHQNVQHHEPVCEQVQCPLRPTRHRQENARALFLMR
Nucleotide Sequence ATGCTGTCACTTTCACGTGCAGGACTGGGGACTGTTGTTCCCCGGGCATGCCACGAGGGATCCCGAGGAACTGGTCCTTTCTGTTCCCTCCCAGCAATGCAACGACGTGGGGCTCATGGCCTACCTCGGCACCATCACCAAAACGTGCAACACCATGAACCAGTTTGTGAACAAGTTCAATGTCCTCTACGACCGACAAGGCATCGGCAGGAGAATGCGCGGGCTCTTTTTCTGATGAGG
CircID chr7:100091423|100091794
ORF Type ORF5
Protein Length 83
Nucleotide Length 252
Protein Sequence MGRRGLCCHFHVQDWGLLFPGHATRDPEELVLSVPSQQCNDVGLMAYLGTITKTCNTMNQFVNKFNVLYDRQGIGRRMRGLFF
Nucleotide Sequence ATGGGGAGGCGGGGCTTATGCTGTCACTTTCACGTGCAGGACTGGGGACTGTTGTTCCCCGGGCATGCCACGAGGGATCCCGAGGAACTGGTCCTTTCTGTTCCCTCCCAGCAATGCAACGACGTGGGGCTCATGGCCTACCTCGGCACCATCACCAAAACGTGCAACACCATGAACCAGTTTGTGAACAAGTTCAATGTCCTCTACGACCGACAAGGCATCGGCAGGAGAATGCGCGGGCTCTTTTTCTGA
CircID chr7:100091423|100091794
ORF Type ORF6
Protein Length 88
Nucleotide Length 267
Protein Sequence MREAYALCHCLPVLSTDKFKTDFYDVSVKPGWGGGAYAVTFTCRTGDCCSPGMPRGIPRNWSFLFPPSNATTWGSWPTSAPSPKRATP
Nucleotide Sequence CTGCGGGAGGCCTATGCTCTGTGTCACTGTCTCCCGGTGCTCAGCACAGACAAGTTCAAGACAGATTTTTATGATGTGAGTGTAAAACCCGGATGGGGAGGCGGGGCTTATGCTGTCACTTTCACGTGCAGGACTGGGGACTGTTGTTCCCCGGGCATGCCACGAGGGATCCCGAGGAACTGGTCCTTTCTGTTCCCTCCCAGCAATGCAACGACGTGGGGCTCATGGCCTACCTCGGCACCATCACCAAAACGTGCAACACCATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab