CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100124862|100125120
Strand -
CircType exon
Host Gene ENSG00000166997.6;
Algorism CIRI2;
Sequence CCCAAACTTGACCGAGAAGATCTTTGACCCTTGCCTTTGAGCCCCCAGGAGGGGAAGGGATCATGGAGAGCCCTCTAAAGCCTGCACTCTCCCTGCTCCACAGCTTTCAGGGTGTGTTTATGAGTGACTCCACCCAAGCTTGTAGCTGTTCTCTCCCATCTAACCTCAGGCAAGATCCTGGTGAAACAGCATGACATGGCTTCTGGGGTGGAGGGTGGGGGTGGAGGTCCTGCTCCTAGAGATGAACTCTATCCAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100124862|100125120 hsa-miR-197-5p 0 0 1
chr7:100124862|100125120 hsa-miR-197-3p 0 0 1
chr7:100124862|100125120 hsa-miR-136-5p 0 0 1
chr7:100124862|100125120 hsa-miR-136-3p 0 0 1
chr7:100124862|100125120 hsa-miR-185-5p 0 0 1
chr7:100124862|100125120 hsa-miR-185-3p 0 0 1
chr7:100124862|100125120 hsa-miR-320a-5p 0 0 1
chr7:100124862|100125120 hsa-miR-320a-3p 0 0 1
chr7:100124862|100125120 hsa-miR-637 1 0 1
chr7:100124862|100125120 hsa-miR-668-5p 0 0 1
chr7:100124862|100125120 hsa-miR-668-3p 0 0 1
chr7:100124862|100125120 hsa-miR-708-5p 0 0 1
chr7:100124862|100125120 hsa-miR-708-3p 0 0 1
chr7:100124862|100125120 hsa-miR-877-5p 0 0 1
chr7:100124862|100125120 hsa-miR-877-3p 0 0 1
chr7:100124862|100125120 hsa-miR-942-5p 0 0 1
chr7:100124862|100125120 hsa-miR-942-3p 0 0 1
chr7:100124862|100125120 hsa-miR-1226-5p 0 0 1
chr7:100124862|100125120 hsa-miR-1226-3p 0 0 1
chr7:100124862|100125120 hsa-miR-1286 0 0 1
chr7:100124862|100125120 hsa-miR-1287-5p 0 0 1
chr7:100124862|100125120 hsa-miR-1287-3p 0 0 1
chr7:100124862|100125120 hsa-miR-1293 0 0 1
chr7:100124862|100125120 hsa-miR-1303 0 0 1
chr7:100124862|100125120 hsa-miR-1251-5p 0 0 1
chr7:100124862|100125120 hsa-miR-1251-3p 0 0 1
chr7:100124862|100125120 hsa-miR-1262 0 0 1
chr7:100124862|100125120 hsa-miR-1289 0 0 1
chr7:100124862|100125120 hsa-miR-28-5p 0 0 1
chr7:100124862|100125120 hsa-miR-188-5p 0 0 1
chr7:100124862|100125120 hsa-miR-320b 1 0 1
chr7:100124862|100125120 hsa-miR-320c 0 0 1
chr7:100124862|100125120 hsa-miR-320d 0 0 1
chr7:100124862|100125120 hsa-miR-362-3p 0 0 1
chr7:100124862|100125120 hsa-miR-329 0 0 1
chr7:100124862|100125120 hsa-miR-1201 0 0 1
chr7:100124862|100125120 hsa-miR-940 1 0 0
chr7:100124862|100125120 hsa-miR-1182 1 0 0
chr7:100124862|100125120 hsa-miR-3147 1 0 0
chr7:100124862|100125120 hsa-miR-4298 1 0 0
chr7:100124862|100125120 hsa-miR-4322 1 0 0
chr7:100124862|100125120 hsa-miR-4270 1 0 0
chr7:100124862|100125120 hsa-miR-4437 1 0 0
chr7:100124862|100125120 hsa-miR-4706 1 0 0
chr7:100124862|100125120 hsa-miR-4721 1 0 0
chr7:100124862|100125120 hsa-miR-4734 1 0 0
chr7:100124862|100125120 hsa-miR-4739 1 0 0
chr7:100124862|100125120 hsa-miR-5090 1 0 0
chr7:100124862|100125120 hsa-miR-5698 1 0 0
chr7:100124862|100125120 hsa-miR-5787 1 0 0
chr7:100124862|100125120 hsa-miR-6081 1 0 0
chr7:100124862|100125120 hsa-miR-6745 1 0 0
chr7:100124862|100125120 hsa-miR-7150 1 0 0
chr7:100124862|100125120 hsa-miR-7974 1 0 0
chr7:100124862|100125120 hsa-miR-8085 1 0 0
chr7:100124862|100125120 hsa-miR-12115 1 0 0
chr7:100124862|100125120 hsa-miR-12116 1 0 0
chr7:100124862|100125120 hsa-miR-504-3p 1 0 0
chr7:100124862|100125120 hsa-miR-6809-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6894-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4687-3p 1 0 0
chr7:100124862|100125120 hsa-miR-6510-5p 1 0 0
chr7:100124862|100125120 hsa-miR-7114-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6880-5p 1 0 0
chr7:100124862|100125120 hsa-miR-7847-3p 1 0 0
chr7:100124862|100125120 hsa-miR-4722-5p 1 0 0
chr7:100124862|100125120 hsa-miR-3622b-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6721-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4655-5p 1 0 0
chr7:100124862|100125120 hsa-miR-3151-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6793-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6796-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6732-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6798-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6786-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4640-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4690-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4732-5p 1 0 0
chr7:100124862|100125120 hsa-miR-149-3p 1 0 0
chr7:100124862|100125120 hsa-miR-4733-3p 1 0 0
chr7:100124862|100125120 hsa-miR-7112-5p 1 0 0
chr7:100124862|100125120 hsa-miR-2277-5p 1 0 0
chr7:100124862|100125120 hsa-miR-431-3p 1 0 0
chr7:100124862|100125120 hsa-miR-1207-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4763-3p 1 0 0
chr7:100124862|100125120 hsa-miR-6812-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6870-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6743-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6752-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6754-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6756-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6803-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6819-5p 1 0 0
chr7:100124862|100125120 hsa-miR-7110-5p 1 0 0
chr7:100124862|100125120 hsa-miR-11181-3p 1 0 0
chr7:100124862|100125120 hsa-miR-6722-3p 1 0 0
chr7:100124862|100125120 hsa-miR-6751-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6763-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6779-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6808-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6879-5p 1 0 0
chr7:100124862|100125120 hsa-miR-7111-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4728-5p 1 0 0
chr7:100124862|100125120 hsa-miR-5196-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6836-5p 1 0 0
chr7:100124862|100125120 hsa-miR-1237-5p 1 0 0
chr7:100124862|100125120 hsa-miR-1909-3p 1 0 0
chr7:100124862|100125120 hsa-miR-328-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4725-3p 1 0 0
chr7:100124862|100125120 hsa-miR-4749-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6777-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6846-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6848-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6883-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6831-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6511b-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6731-5p 1 0 0
chr7:100124862|100125120 hsa-miR-7151-3p 1 0 0
chr7:100124862|100125120 hsa-miR-10398-3p 1 0 0
chr7:100124862|100125120 hsa-miR-6785-5p 1 0 0
chr7:100124862|100125120 hsa-miR-4667-5p 1 0 0
chr7:100124862|100125120 hsa-miR-6791-5p 1 0 0
chr7:100124862|100125120 hsa-miR-574-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:100124862|100125120
ORF Type ORF1
Protein Length 27
Nucleotide Length 81
Protein Sequence MVKQHDMASGVEGGGGGPAPRDELYPA
Nucleotide Sequence CTGGTGAAACAGCATGACATGGCTTCTGGGGTGGAGGGTGGGGGTGGAGGTCCTGCTCCTAGAGATGAACTCTATCCAGCC
CircID chr7:100124862|100125120
ORF Type ORF2
Protein Length 56
Nucleotide Length 171
Protein Sequence MTLAFEPPGGEGIMESPLKPALSLLHSFQGVFMSDSTQACSCSLPSNLRQDPGETA
Nucleotide Sequence TTGACCCTTGCCTTTGAGCCCCCAGGAGGGGAAGGGATCATGGAGAGCCCTCTAAAGCCTGCACTCTCCCTGCTCCACAGCTTTCAGGGTGTGTTTATGAGTGACTCCACCCAAGCTTGTAGCTGTTCTCTCCCATCTAACCTCAGGCAAGATCCTGGTGAAACAGCATGA
CircID chr7:100124862|100125120
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MWSRESAGFRGLSMIPSPPGGSKARVKDLLGQVW
Nucleotide Sequence CTGTGGAGCAGGGAGAGTGCAGGCTTTAGAGGGCTCTCCATGATCCCTTCCCCTCCTGGGGGCTCAAAGGCAAGGGTCAAAGATCTTCTCGGTCAAGTTTGG
CircID chr7:100124862|100125120
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MSCCFTRILPEVRWERTATSLGGVTHKHTLKAVEQGECRL
Nucleotide Sequence ATGTCATGCTGTTTCACCAGGATCTTGCCTGAGGTTAGATGGGAGAGAACAGCTACAAGCTTGGGTGGAGTCACTCATAAACACACCCTGAAAGCTGTGGAGCAGGGAGAGTGCAGGCTTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab