CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100477447|100477617
Strand +
CircType exon
Host Gene ENSG00000166925.7;
Algorism CIRI2;
Sequence CGTCAGGCCTGTCTCAGGGCCCCACCTCCTGGCTCCGTCCACCCCCCACCTCTCCTGGACCTCAGGCCCGCTCCTTCACTGGGGGACTGGGCCAGCTGGTGGTGCCCAGCAAAGCCAAGGCAGAGAAACCCCCACTGTCGGCCTCCTCACCCCAGCAGCGCCCCCCAGAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100477447|100477617 hsa-miR-184 0 0 1
chr7:100477447|100477617 hsa-miR-326 0 0 1
chr7:100477447|100477617 hsa-miR-608 1 1 1
chr7:100477447|100477617 hsa-miR-612 0 1 1
chr7:100477447|100477617 hsa-miR-637 0 1 1
chr7:100477447|100477617 hsa-miR-665 0 1 1
chr7:100477447|100477617 hsa-miR-1226-5p 0 0 1
chr7:100477447|100477617 hsa-miR-1226-3p 0 0 1
chr7:100477447|100477617 hsa-miR-1291 0 1 1
chr7:100477447|100477617 hsa-miR-1252-5p 0 0 1
chr7:100477447|100477617 hsa-miR-1252-3p 0 0 1
chr7:100477447|100477617 hsa-miR-361-3p 0 0 1
chr7:100477447|100477617 hsa-miR-1207-3p 0 1 1
chr7:100477447|100477617 hsa-miR-342-5p 0 0 1
chr7:100477447|100477617 hsa-miR-125a-5p 0 1 1
chr7:100477447|100477617 hsa-miR-330-5p 0 0 1
chr7:100477447|100477617 hsa-miR-220b 0 0 1
chr7:100477447|100477617 hsa-miR-125b 0 0 1
chr7:100477447|100477617 hsa-miR-1285 0 0 1
chr7:100477447|100477617 hsa-miR-449a 1 0 0
chr7:100477447|100477617 hsa-miR-601 0 1 0
chr7:100477447|100477617 hsa-miR-663a 1 0 0
chr7:100477447|100477617 hsa-miR-762 1 0 0
chr7:100477447|100477617 hsa-miR-765 1 0 0
chr7:100477447|100477617 hsa-miR-2861 1 0 0
chr7:100477447|100477617 hsa-miR-3141 1 0 0
chr7:100477447|100477617 hsa-miR-3170 0 1 0
chr7:100477447|100477617 hsa-miR-3196 1 0 0
chr7:100477447|100477617 hsa-miR-4319 0 1 0
chr7:100477447|100477617 hsa-miR-4324 0 1 0
chr7:100477447|100477617 hsa-miR-4281 1 0 0
chr7:100477447|100477617 hsa-miR-3621 1 0 0
chr7:100477447|100477617 hsa-miR-1268b 1 0 0
chr7:100477447|100477617 hsa-miR-4447 0 1 0
chr7:100477447|100477617 hsa-miR-4466 1 0 0
chr7:100477447|100477617 hsa-miR-4481 1 0 0
chr7:100477447|100477617 hsa-miR-4488 1 0 0
chr7:100477447|100477617 hsa-miR-4510 1 0 0
chr7:100477447|100477617 hsa-miR-4651 1 1 0
chr7:100477447|100477617 hsa-miR-4656 1 0 0
chr7:100477447|100477617 hsa-miR-4689 1 1 0
chr7:100477447|100477617 hsa-miR-4706 1 0 0
chr7:100477447|100477617 hsa-miR-4767 1 0 0
chr7:100477447|100477617 hsa-miR-5192 1 0 0
chr7:100477447|100477617 hsa-miR-5572 1 0 0
chr7:100477447|100477617 hsa-miR-5787 1 0 0
chr7:100477447|100477617 hsa-miR-6090 1 0 0
chr7:100477447|100477617 hsa-miR-6127 1 0 0
chr7:100477447|100477617 hsa-miR-6133 1 0 0
chr7:100477447|100477617 hsa-miR-6134 0 1 0
chr7:100477447|100477617 hsa-miR-6745 0 1 0
chr7:100477447|100477617 hsa-miR-7976 0 1 0
chr7:100477447|100477617 hsa-miR-8089 1 0 0
chr7:100477447|100477617 hsa-miR-12119 1 0 0
chr7:100477447|100477617 hsa-miR-370-3p 1 0 0
chr7:100477447|100477617 hsa-miR-4433b-3p 1 0 0
chr7:100477447|100477617 hsa-miR-92a-2-5p 0 1 0
chr7:100477447|100477617 hsa-miR-128-1-5p 1 0 0
chr7:100477447|100477617 hsa-miR-7155-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6747-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4433a-3p 1 0 0
chr7:100477447|100477617 hsa-miR-7106-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6825-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6894-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4687-3p 1 0 0
chr7:100477447|100477617 hsa-miR-3692-5p 0 1 0
chr7:100477447|100477617 hsa-miR-8071 1 1 0
chr7:100477447|100477617 hsa-miR-6089 1 1 0
chr7:100477447|100477617 hsa-miR-7847-3p 1 0 0
chr7:100477447|100477617 hsa-miR-4695-5p 0 1 0
chr7:100477447|100477617 hsa-miR-6746-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6730-5p 1 0 0
chr7:100477447|100477617 hsa-miR-505-5p 0 1 0
chr7:100477447|100477617 hsa-miR-593-5p 0 1 0
chr7:100477447|100477617 hsa-miR-7160-5p 1 0 0
chr7:100477447|100477617 hsa-miR-24-3p 0 1 0
chr7:100477447|100477617 hsa-miR-6741-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6742-5p 1 0 0
chr7:100477447|100477617 hsa-miR-3151-5p 1 1 0
chr7:100477447|100477617 hsa-miR-3180-3p 1 0 0
chr7:100477447|100477617 hsa-miR-6732-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6805-5p 1 1 0
chr7:100477447|100477617 hsa-miR-942-5p 0 1 0
chr7:100477447|100477617 hsa-miR-6782-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6786-5p 1 0 0
chr7:100477447|100477617 hsa-miR-7109-5p 1 1 0
chr7:100477447|100477617 hsa-miR-4783-3p 1 1 0
chr7:100477447|100477617 hsa-miR-4640-5p 1 0 0
chr7:100477447|100477617 hsa-miR-1228-5p 0 1 0
chr7:100477447|100477617 hsa-miR-92b-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6749-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6789-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6776-3p 0 1 0
chr7:100477447|100477617 hsa-miR-6781-5p 1 0 0
chr7:100477447|100477617 hsa-miR-2277-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4524a-3p 0 1 0
chr7:100477447|100477617 hsa-miR-4763-3p 1 0 0
chr7:100477447|100477617 hsa-miR-6769b-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6812-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6816-5p 1 0 0
chr7:100477447|100477617 hsa-miR-3180 1 0 0
chr7:100477447|100477617 hsa-miR-5001-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6726-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6737-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6743-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6752-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6756-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6769a-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6803-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6819-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6842-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6851-5p 1 1 0
chr7:100477447|100477617 hsa-miR-7110-5p 1 1 0
chr7:100477447|100477617 hsa-miR-10401-5p 1 0 0
chr7:100477447|100477617 hsa-miR-11181-3p 1 0 0
chr7:100477447|100477617 hsa-miR-1249-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6722-3p 1 0 0
chr7:100477447|100477617 hsa-miR-6751-5p 1 0 0
chr7:100477447|100477617 hsa-miR-7111-5p 1 0 0
chr7:100477447|100477617 hsa-miR-5189-5p 0 1 0
chr7:100477447|100477617 hsa-miR-10396a-5p 1 0 0
chr7:100477447|100477617 hsa-miR-10396b-5p 1 0 0
chr7:100477447|100477617 hsa-miR-1237-5p 1 0 0
chr7:100477447|100477617 hsa-miR-328-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4649-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4726-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4745-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6729-5p 1 0 0
chr7:100477447|100477617 hsa-miR-675-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6795-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6846-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6848-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6858-5p 1 1 0
chr7:100477447|100477617 hsa-miR-6887-5p 1 0 0
chr7:100477447|100477617 hsa-miR-3187-5p 0 1 0
chr7:100477447|100477617 hsa-miR-6885-5p 1 1 0
chr7:100477447|100477617 hsa-miR-939-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4758-5p 1 0 0
chr7:100477447|100477617 hsa-miR-10394-3p 1 0 0
chr7:100477447|100477617 hsa-miR-1914-3p 1 0 0
chr7:100477447|100477617 hsa-miR-6855-5p 1 0 0
chr7:100477447|100477617 hsa-miR-10398-3p 1 0 0
chr7:100477447|100477617 hsa-miR-6891-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4472 0 1 0
chr7:100477447|100477617 hsa-miR-3184-5p 1 0 0
chr7:100477447|100477617 hsa-miR-3689d 0 1 0
chr7:100477447|100477617 hsa-miR-6724-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6791-5p 1 1 0
chr7:100477447|100477617 hsa-miR-550a-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6762-5p 1 0 0
chr7:100477447|100477617 hsa-miR-6805-3p 1 0 0
chr7:100477447|100477617 hsa-miR-10400-3p 1 0 0
chr7:100477447|100477617 hsa-miR-9851-3p 0 1 0
chr7:100477447|100477617 hsa-miR-3130-5p 0 1 0
chr7:100477447|100477617 hsa-miR-449b-5p 1 0 0
chr7:100477447|100477617 hsa-miR-4653-5p 0 1 0
chr7:100477447|100477617 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr7:100477447|100477617
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MDLRPAPSLGDWASWWCPAKPRQRNPHCRPPHPSSAPQS
Nucleotide Sequence CTGGACCTCAGGCCCGCTCCTTCACTGGGGGACTGGGCCAGCTGGTGGTGCCCAGCAAAGCCAAGGCAGAGAAACCCCCACTGTCGGCCTCCTCACCCCAGCAGCGCCCCCCAGAGC
CircID chr7:100477447|100477617
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MAPSTPHLSWTSGPLLHWGTGPAGGAQQSQGRETPTVGLLTPAAPPR
Nucleotide Sequence CTGGCTCCGTCCACCCCCCACCTCTCCTGGACCTCAGGCCCGCTCCTTCACTGGGGGACTGGGCCAGCTGGTGGTGCCCAGCAAAGCCAAGGCAGAGAAACCCCCACTGTCGGCCTCCTCACCCCAGCAGCGCCCCCCAGA
CircID chr7:100477447|100477617
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MSQGPTSWLRPPPTSPGPQARSFTGGLGQLVVPSKAKAEKPPLSASSPQQRPPE
Nucleotide Sequence CTGTCTCAGGGCCCCACCTCCTGGCTCCGTCCACCCCCCACCTCTCCTGGACCTCAGGCCCGCTCCTTCACTGGGGGACTGGGCCAGCTGGTGGTGCCCAGCAAAGCCAAGGCAGAGAAACCCCCACTGTCGGCCTCCTCACCCCAGCAGCGCCCCCCAGAG
CircID chr7:100477447|100477617
ORF Type ORF4
Protein Length 30
Nucleotide Length 93
Protein Sequence MGGAAGVRRPTVGVSLPWLCWAPPAGPVPQ
Nucleotide Sequence CTGGGGGGCGCTGCTGGGGTGAGGAGGCCGACAGTGGGGGTTTCTCTGCCTTGGCTTTGCTGGGCACCACCAGCTGGCCCAGTCCCCCAGTGA
CircID chr7:100477447|100477617
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MAQSPSEGAGLRSRRGGGWTEPGGGALRQA
Nucleotide Sequence CTGGCCCAGTCCCCCAGTGAAGGAGCGGGCCTGAGGTCCAGGAGAGGTGGGGGGTGGACGGAGCCAGGAGGTGGGGCCCTGAGACAGGCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab