CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100477564|100477741
Strand +
CircType exon
Host Gene ENSG00000166925.7;
Algorism CIRI2;
Sequence CTGGAGCCCCACAGCTTCGGCGGACTCCTGGAGGGAATTCGAGGGGCCTCAGGGGGCGCCGGGGGCAGATCTTTGGATTCCAGGTTGGAGCTGGCCAGCCTCGGCCTGGGCGCCCCCACCCCACCGTCAGGCCTGTCTCAGGGCCCCACCTCCTGGCTCCGTCCACCCCCCACCTCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100477564|100477741 hsa-miR-184 0 0 1
chr7:100477564|100477741 hsa-miR-608 1 1 1
chr7:100477564|100477741 hsa-miR-619-5p 0 0 1
chr7:100477564|100477741 hsa-miR-619-3p 0 0 1
chr7:100477564|100477741 hsa-miR-665 1 1 1
chr7:100477564|100477741 hsa-miR-1291 0 1 1
chr7:100477564|100477741 hsa-miR-491-5p 0 0 1
chr7:100477564|100477741 hsa-miR-485-5p 1 1 1
chr7:100477564|100477741 hsa-miR-490-3p 0 0 1
chr7:100477564|100477741 hsa-miR-1289 0 1 1
chr7:100477564|100477741 hsa-miR-324-3p 0 0 1
chr7:100477564|100477741 hsa-miR-342-5p 0 0 1
chr7:100477564|100477741 hsa-miR-125a-5p 0 1 1
chr7:100477564|100477741 hsa-miR-125b 0 0 1
chr7:100477564|100477741 hsa-miR-642 0 0 1
chr7:100477564|100477741 hsa-miR-663a 1 0 0
chr7:100477564|100477741 hsa-miR-762 1 0 0
chr7:100477564|100477741 hsa-miR-760 1 0 0
chr7:100477564|100477741 hsa-miR-1203 1 0 0
chr7:100477564|100477741 hsa-miR-1268a 1 0 0
chr7:100477564|100477741 hsa-miR-1913 0 1 0
chr7:100477564|100477741 hsa-miR-2861 1 1 0
chr7:100477564|100477741 hsa-miR-3135a 0 1 0
chr7:100477564|100477741 hsa-miR-544b 0 1 0
chr7:100477564|100477741 hsa-miR-3170 0 1 0
chr7:100477564|100477741 hsa-miR-4298 1 0 0
chr7:100477564|100477741 hsa-miR-4313 0 1 0
chr7:100477564|100477741 hsa-miR-4319 0 1 0
chr7:100477564|100477741 hsa-miR-4324 0 1 0
chr7:100477564|100477741 hsa-miR-1268b 1 0 0
chr7:100477564|100477741 hsa-miR-4447 0 1 0
chr7:100477564|100477741 hsa-miR-4651 1 1 0
chr7:100477564|100477741 hsa-miR-4706 1 0 0
chr7:100477564|100477741 hsa-miR-6134 0 1 0
chr7:100477564|100477741 hsa-miR-6745 1 1 0
chr7:100477564|100477741 hsa-miR-7976 0 1 0
chr7:100477564|100477741 hsa-miR-150-3p 1 0 0
chr7:100477564|100477741 hsa-miR-4433b-3p 1 0 0
chr7:100477564|100477741 hsa-miR-18a-3p 0 1 0
chr7:100477564|100477741 hsa-miR-92a-2-5p 0 1 0
chr7:100477564|100477741 hsa-miR-6747-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4433a-3p 1 0 0
chr7:100477564|100477741 hsa-miR-7106-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6894-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6799-5p 1 0 0
chr7:100477564|100477741 hsa-miR-8071 1 1 0
chr7:100477564|100477741 hsa-miR-7851-3p 1 0 0
chr7:100477564|100477741 hsa-miR-6089 1 0 0
chr7:100477564|100477741 hsa-miR-6757-5p 1 0 0
chr7:100477564|100477741 hsa-miR-505-5p 0 1 0
chr7:100477564|100477741 hsa-miR-8069 1 0 0
chr7:100477564|100477741 hsa-miR-7845-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6742-5p 1 1 0
chr7:100477564|100477741 hsa-miR-3151-5p 1 1 0
chr7:100477564|100477741 hsa-miR-3180-3p 1 0 0
chr7:100477564|100477741 hsa-miR-6793-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6796-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6732-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6782-5p 1 1 0
chr7:100477564|100477741 hsa-miR-5008-5p 0 1 0
chr7:100477564|100477741 hsa-miR-615-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6786-5p 1 1 0
chr7:100477564|100477741 hsa-miR-7109-5p 1 1 0
chr7:100477564|100477741 hsa-miR-4640-5p 1 0 0
chr7:100477564|100477741 hsa-miR-1228-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6749-5p 1 1 0
chr7:100477564|100477741 hsa-miR-4787-5p 1 0 0
chr7:100477564|100477741 hsa-miR-937-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6789-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6802-5p 1 0 0
chr7:100477564|100477741 hsa-miR-5010-5p 1 0 0
chr7:100477564|100477741 hsa-miR-3190-5p 1 1 0
chr7:100477564|100477741 hsa-miR-4707-5p 0 1 0
chr7:100477564|100477741 hsa-miR-6795-3p 0 1 0
chr7:100477564|100477741 hsa-miR-4649-3p 0 1 0
chr7:100477564|100477741 hsa-miR-4524a-3p 1 1 0
chr7:100477564|100477741 hsa-miR-6851-3p 1 1 0
chr7:100477564|100477741 hsa-miR-6789-3p 0 1 0
chr7:100477564|100477741 hsa-miR-4524b-3p 0 1 0
chr7:100477564|100477741 hsa-miR-4763-3p 1 0 0
chr7:100477564|100477741 hsa-miR-6769b-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6778-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6812-5p 0 1 0
chr7:100477564|100477741 hsa-miR-6893-5p 1 0 0
chr7:100477564|100477741 hsa-miR-5001-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6726-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6737-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6752-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6756-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6769a-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6803-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6815-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6819-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6842-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6851-5p 1 1 0
chr7:100477564|100477741 hsa-miR-7110-5p 1 1 0
chr7:100477564|100477741 hsa-miR-1249-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6751-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6763-5p 1 0 0
chr7:100477564|100477741 hsa-miR-7111-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4755-5p 0 1 0
chr7:100477564|100477741 hsa-miR-10396b-5p 1 0 0
chr7:100477564|100477741 hsa-miR-1237-5p 1 1 0
chr7:100477564|100477741 hsa-miR-328-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4649-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4726-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4745-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6795-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6846-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6848-5p 1 0 0
chr7:100477564|100477741 hsa-miR-6887-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4665-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4472 0 1 0
chr7:100477564|100477741 hsa-miR-6785-5p 1 0 0
chr7:100477564|100477741 hsa-miR-3689d 0 1 0
chr7:100477564|100477741 hsa-miR-6791-5p 1 1 0
chr7:100477564|100477741 hsa-miR-6762-5p 1 0 0
chr7:100477564|100477741 hsa-miR-4653-5p 0 1 0
chr7:100477564|100477741 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:100477564|100477741
ORF Type ORF1
Protein Length 59
Nucleotide Length 177
Protein Sequence LEPHSFGGLLEGIRGASGGAGGRSLDSRLELASLGLGAPTPPSGLSQGPTSWLRPPPTS
Nucleotide Sequence CTGGAGCCCCACAGCTTCGGCGGACTCCTGGAGGGAATTCGAGGGGCCTCAGGGGGCGCCGGGGGCAGATCTTTGGATTCCAGGTTGGAGCTGGCCAGCCTCGGCCTGGGCGCCCCCACCCCACCGTCAGGCCTGTCTCAGGGCCCCACCTCCTGGCTCCGTCCACCCCCCACCTCT
CircID chr7:100477564|100477741
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MTVGWGRPGRGWPAPTWNPKICPRRPLRPLEFPPGVRRSCGAP
Nucleotide Sequence CTGACGGTGGGGTGGGGGCGCCCAGGCCGAGGCTGGCCAGCTCCAACCTGGAATCCAAAGATCTGCCCCCGGCGCCCCCTGAGGCCCCTCGAATTCCCTCCAGGAGTCCGCCGAAGCTGTGGGGCTCCA
CircID chr7:100477564|100477741
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MASSNLESKDLPPAPPEAPRIPSRSPPKLWGS
Nucleotide Sequence CTGGCCAGCTCCAACCTGGAATCCAAAGATCTGCCCCCGGCGCCCCCTGAGGCCCCTCGAATTCCCTCCAGGAGTCCGCCGAAGCTGTGGGGCTCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab