CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100574870|100575055
Strand -
CircType exon
Host Gene ENSG00000274272.1;
Algorism CIRI2;
Sequence ATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGCCCAGGGTCTGGGGGCACCAGAGTGGGGCCTCTGAGGTCAGTGTCTGTGAAGGGGGTGCACTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100574870|100575055 hsa-miR-27a-5p 0 0 1
chr7:100574870|100575055 hsa-miR-27a-3p 0 0 1
chr7:100574870|100575055 hsa-miR-148a-5p 0 0 1
chr7:100574870|100575055 hsa-miR-148a-3p 0 0 1
chr7:100574870|100575055 hsa-miR-205-5p 0 0 1
chr7:100574870|100575055 hsa-miR-205-3p 0 0 1
chr7:100574870|100575055 hsa-miR-27b-5p 0 0 1
chr7:100574870|100575055 hsa-miR-27b-3p 0 0 1
chr7:100574870|100575055 hsa-miR-130a-5p 0 0 1
chr7:100574870|100575055 hsa-miR-130a-3p 0 0 1
chr7:100574870|100575055 hsa-miR-152-5p 0 0 1
chr7:100574870|100575055 hsa-miR-152-3p 0 0 1
chr7:100574870|100575055 hsa-miR-301a-5p 0 0 1
chr7:100574870|100575055 hsa-miR-301a-3p 0 0 1
chr7:100574870|100575055 hsa-miR-130b-5p 0 0 1
chr7:100574870|100575055 hsa-miR-130b-3p 0 0 1
chr7:100574870|100575055 hsa-miR-148b-5p 0 0 1
chr7:100574870|100575055 hsa-miR-148b-3p 0 0 1
chr7:100574870|100575055 hsa-miR-504-5p 0 0 1
chr7:100574870|100575055 hsa-miR-504-3p 0 0 1
chr7:100574870|100575055 hsa-miR-454-5p 0 0 1
chr7:100574870|100575055 hsa-miR-454-3p 0 0 1
chr7:100574870|100575055 hsa-miR-301b-5p 0 0 1
chr7:100574870|100575055 hsa-miR-301b-3p 0 0 1
chr7:100574870|100575055 hsa-miR-296-5p 0 1 1
chr7:100574870|100575055 hsa-miR-512-3p 0 0 1
chr7:100574870|100575055 hsa-miR-770-5p 0 0 1
chr7:100574870|100575055 hsa-miR-361-3p 0 1 1
chr7:100574870|100575055 hsa-miR-1224-3p 0 1 1
chr7:100574870|100575055 hsa-miR-513a-5p 0 0 1
chr7:100574870|100575055 hsa-miR-628-5p 0 0 1
chr7:100574870|100575055 hsa-miR-326 1 0 0
chr7:100574870|100575055 hsa-miR-612 1 0 0
chr7:100574870|100575055 hsa-miR-661 0 1 0
chr7:100574870|100575055 hsa-miR-1470 1 0 0
chr7:100574870|100575055 hsa-miR-4313 1 0 0
chr7:100574870|100575055 hsa-miR-4323 0 1 0
chr7:100574870|100575055 hsa-miR-4286 0 1 0
chr7:100574870|100575055 hsa-miR-4292 0 1 0
chr7:100574870|100575055 hsa-miR-4469 1 1 0
chr7:100574870|100575055 hsa-miR-4718 1 0 0
chr7:100574870|100575055 hsa-miR-8080 0 1 0
chr7:100574870|100575055 hsa-miR-18a-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4665-3p 1 0 0
chr7:100574870|100575055 hsa-miR-3157-5p 1 0 0
chr7:100574870|100575055 hsa-miR-6836-3p 1 0 0
chr7:100574870|100575055 hsa-miR-149-5p 1 0 0
chr7:100574870|100575055 hsa-miR-6720-5p 1 0 0
chr7:100574870|100575055 hsa-miR-766-3p 1 0 0
chr7:100574870|100575055 hsa-miR-145-5p 1 0 0
chr7:100574870|100575055 hsa-miR-6741-5p 1 0 0
chr7:100574870|100575055 hsa-miR-3189-5p 1 1 0
chr7:100574870|100575055 hsa-miR-6849-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6845-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4725-5p 0 1 0
chr7:100574870|100575055 hsa-miR-6728-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6735-3p 1 0 0
chr7:100574870|100575055 hsa-miR-615-3p 1 0 0
chr7:100574870|100575055 hsa-miR-1343-3p 0 1 0
chr7:100574870|100575055 hsa-miR-615-5p 1 0 0
chr7:100574870|100575055 hsa-miR-939-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6772-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6514-3p 1 0 0
chr7:100574870|100575055 hsa-miR-7113-3p 1 0 0
chr7:100574870|100575055 hsa-miR-3667-3p 1 0 0
chr7:100574870|100575055 hsa-miR-324-5p 1 0 0
chr7:100574870|100575055 hsa-miR-1266-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4667-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4640-3p 1 0 0
chr7:100574870|100575055 hsa-miR-339-5p 1 0 0
chr7:100574870|100575055 hsa-miR-6828-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4758-3p 1 1 0
chr7:100574870|100575055 hsa-miR-4746-3p 0 1 0
chr7:100574870|100575055 hsa-miR-6752-3p 1 0 0
chr7:100574870|100575055 hsa-miR-3074-5p 1 0 0
chr7:100574870|100575055 hsa-miR-4671-3p 0 1 0
chr7:100574870|100575055 hsa-miR-6865-3p 1 0 0
chr7:100574870|100575055 hsa-miR-1914-5p 1 0 0
chr7:100574870|100575055 hsa-miR-4749-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6777-3p 1 1 0
chr7:100574870|100575055 hsa-miR-1292-3p 1 0 0
chr7:100574870|100575055 hsa-miR-502-5p 1 0 0
chr7:100574870|100575055 hsa-miR-1227-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4433a-5p 1 0 0
chr7:100574870|100575055 hsa-miR-767-3p 1 0 0
chr7:100574870|100575055 hsa-miR-4433b-5p 1 0 0
chr7:100574870|100575055 hsa-miR-222-3p 1 0 0
chr7:100574870|100575055 hsa-miR-5699-5p 0 1 0
chr7:100574870|100575055 hsa-miR-6790-3p 0 1 0
chr7:100574870|100575055 hsa-miR-3127-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6754-3p 1 1 0
chr7:100574870|100575055 hsa-miR-5008-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6877-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6724-5p 0 1 0
chr7:100574870|100575055 hsa-miR-2682-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6893-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6792-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6810-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6829-3p 1 0 0
chr7:100574870|100575055 hsa-miR-10392-3p 1 1 0
chr7:100574870|100575055 hsa-miR-3622a-3p 1 1 0
chr7:100574870|100575055 hsa-miR-4723-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6751-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6819-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6823-3p 1 1 0
chr7:100574870|100575055 hsa-miR-6744-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6783-3p 0 1 0
chr7:100574870|100575055 hsa-miR-4691-5p 1 0 0
chr7:100574870|100575055 hsa-miR-3622b-3p 1 0 0
chr7:100574870|100575055 hsa-miR-6824-3p 1 1 0
chr7:100574870|100575055 hsa-miR-412-3p 1 1 0
chr7:100574870|100575055 hsa-miR-3922-3p 0 1 0
chr7:100574870|100575055 hsa-miR-6764-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:100574870|100575055
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MKAPSALRGGDSWGYWREARGWGPRVWGHQSGASEVSVCEGGALVSLVGAEGTAGGVGWSRD
Nucleotide Sequence ATGAAGGCACCGTCAGCACTGAGAGGTGGGGACTCGTGGGGCTACTGGAGGGAGGCCAGAGGCTGGGGGCCCAGGGTCTGGGGGCACCAGAGTGGGGCCTCTGAGGTCAGTGTCTGTGAAGGGGGTGCACTAGTGTCTTTGGTTGGGGCTGAAGGCACCGCAGGTGGGGTCGGGTGGAGCAGGGAC
CircID chr7:100574870|100575055
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MVPPDPGPPASGLPPVAPRVPTSQC
Nucleotide Sequence CTGGTGCCCCCAGACCCTGGGCCCCCAGCCTCTGGCCTCCCTCCAGTAGCCCCACGAGTCCCCACCTCTCAGTGCTGA
CircID chr7:100574870|100575055
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MLHPTPPAVPSAPTKDTSAPPSQTLTSEAPLWCPQTLGPQPLASLQ
Nucleotide Sequence CTGCTCCACCCGACCCCACCTGCGGTGCCTTCAGCCCCAACCAAAGACACTAGTGCACCCCCTTCACAGACACTGACCTCAGAGGCCCCACTCTGGTGCCCCCAGACCCTGGGCCCCCAGCCTCTGGCCTCCCTCCAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab