CircRNA Information

General Information
circRNA Basic Information
CircID chr7:100577339|100577558
Strand -
CircType exon
Host Gene ENSG00000274272.1;
Algorism CIRI2;
Sequence AGCTGCAAGGTGTCCGGGCGCCGCCGCTCCTCCCCTGCCGGCTCCTCCCGCCTGAGGGACCAAGACAGGGCAAGAGGGGCAGACCCCGGGGTCAGGGAAGGAGGCGGTTGGGGGGTGGGAGGATCGGGCAGTGGCGTCAGTTTGGGGGCTTGGGGTACCTGCTGCTTGGTGCCCTCTCCCTGTCCCCTGCCCCAGGGCTTAATTCGGGTGGTCGCTGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr7:100577339|100577558 hsa-miR-15a-5p 0 0 1
chr7:100577339|100577558 hsa-miR-15a-3p 0 0 1
chr7:100577339|100577558 hsa-miR-214-5p 0 0 1
chr7:100577339|100577558 hsa-miR-214-3p 0 0 1
chr7:100577339|100577558 hsa-miR-15b-5p 0 0 1
chr7:100577339|100577558 hsa-miR-15b-3p 0 0 1
chr7:100577339|100577558 hsa-miR-195-5p 0 0 1
chr7:100577339|100577558 hsa-miR-195-3p 0 0 1
chr7:100577339|100577558 hsa-miR-133b 0 0 1
chr7:100577339|100577558 hsa-miR-346 1 1 1
chr7:100577339|100577558 hsa-miR-424-5p 0 0 1
chr7:100577339|100577558 hsa-miR-424-3p 0 0 1
chr7:100577339|100577558 hsa-miR-431-5p 0 0 1
chr7:100577339|100577558 hsa-miR-431-3p 0 0 1
chr7:100577339|100577558 hsa-miR-497-5p 0 0 1
chr7:100577339|100577558 hsa-miR-497-3p 0 0 1
chr7:100577339|100577558 hsa-miR-503-5p 0 0 1
chr7:100577339|100577558 hsa-miR-503-3p 0 0 1
chr7:100577339|100577558 hsa-miR-1301-5p 0 0 1
chr7:100577339|100577558 hsa-miR-1301-3p 0 0 1
chr7:100577339|100577558 hsa-miR-765 0 0 1
chr7:100577339|100577558 hsa-miR-874-5p 0 0 1
chr7:100577339|100577558 hsa-miR-874-3p 0 0 1
chr7:100577339|100577558 hsa-miR-1281 0 0 1
chr7:100577339|100577558 hsa-miR-486-3p 0 0 1
chr7:100577339|100577558 hsa-miR-532-3p 0 0 1
chr7:100577339|100577558 hsa-miR-146b-3p 0 0 1
chr7:100577339|100577558 hsa-miR-339-5p 0 0 1
chr7:100577339|100577558 hsa-miR-1224-3p 0 0 1
chr7:100577339|100577558 hsa-miR-1207-5p 0 0 1
chr7:100577339|100577558 hsa-miR-324-3p 0 1 1
chr7:100577339|100577558 hsa-miR-125a-5p 0 0 1
chr7:100577339|100577558 hsa-miR-1260 0 0 1
chr7:100577339|100577558 hsa-miR-1274a 0 0 1
chr7:100577339|100577558 hsa-miR-1280 0 0 1
chr7:100577339|100577558 hsa-miR-125b 0 0 1
chr7:100577339|100577558 hsa-miR-16 0 0 1
chr7:100577339|100577558 hsa-miR-133a 0 0 1
chr7:100577339|100577558 hsa-miR-663a 1 0 0
chr7:100577339|100577558 hsa-miR-1913 1 0 0
chr7:100577339|100577558 hsa-miR-4313 1 0 0
chr7:100577339|100577558 hsa-miR-3943 1 0 0
chr7:100577339|100577558 hsa-miR-4739 1 1 0
chr7:100577339|100577558 hsa-miR-4741 1 0 0
chr7:100577339|100577558 hsa-miR-6090 1 0 0
chr7:100577339|100577558 hsa-miR-8085 0 1 0
chr7:100577339|100577558 hsa-miR-12128 0 1 0
chr7:100577339|100577558 hsa-miR-6749-3p 0 1 0
chr7:100577339|100577558 hsa-miR-18a-3p 1 0 0
chr7:100577339|100577558 hsa-miR-7106-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6825-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6720-5p 1 0 0
chr7:100577339|100577558 hsa-miR-6510-5p 0 1 0
chr7:100577339|100577558 hsa-miR-1225-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6721-5p 0 1 0
chr7:100577339|100577558 hsa-miR-4728-3p 1 0 0
chr7:100577339|100577558 hsa-miR-7845-5p 0 1 0
chr7:100577339|100577558 hsa-miR-3180-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6760-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6882-3p 1 0 0
chr7:100577339|100577558 hsa-miR-7109-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6852-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6763-3p 0 1 0
chr7:100577339|100577558 hsa-miR-5001-3p 1 0 0
chr7:100577339|100577558 hsa-miR-378a-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6786-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6769a-3p 1 0 0
chr7:100577339|100577558 hsa-miR-1237-3p 1 0 0
chr7:100577339|100577558 hsa-miR-1236-3p 1 0 0
chr7:100577339|100577558 hsa-miR-4687-5p 1 0 0
chr7:100577339|100577558 hsa-miR-4732-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6793-3p 0 1 0
chr7:100577339|100577558 hsa-miR-4749-3p 1 1 0
chr7:100577339|100577558 hsa-miR-328-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6859-3p 1 0 0
chr7:100577339|100577558 hsa-miR-4649-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6760-3p 1 1 0
chr7:100577339|100577558 hsa-miR-6880-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6798-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6734-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6789-3p 1 1 0
chr7:100577339|100577558 hsa-miR-6790-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6890-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6841-5p 0 1 0
chr7:100577339|100577558 hsa-miR-10400-5p 1 0 0
chr7:100577339|100577558 hsa-miR-4763-3p 1 1 0
chr7:100577339|100577558 hsa-miR-6787-5p 1 1 0
chr7:100577339|100577558 hsa-miR-6775-5p 0 1 0
chr7:100577339|100577558 hsa-miR-1343-5p 1 1 0
chr7:100577339|100577558 hsa-miR-6743-5p 0 1 0
chr7:100577339|100577558 hsa-miR-11181-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6722-3p 0 1 0
chr7:100577339|100577558 hsa-miR-4728-5p 0 1 0
chr7:100577339|100577558 hsa-miR-10396b-5p 1 0 0
chr7:100577339|100577558 hsa-miR-6735-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6795-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6887-5p 0 1 0
chr7:100577339|100577558 hsa-miR-6791-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6791-5p 1 1 0
chr7:100577339|100577558 hsa-miR-6753-3p 1 1 0
chr7:100577339|100577558 hsa-miR-7107-3p 1 1 0
chr7:100577339|100577558 hsa-miR-6829-3p 0 1 0
chr7:100577339|100577558 hsa-miR-9851-3p 0 1 0
chr7:100577339|100577558 hsa-miR-504-5p 1 0 0
chr7:100577339|100577558 hsa-miR-6744-3p 1 0 0
chr7:100577339|100577558 hsa-miR-1234-3p 1 0 0
chr7:100577339|100577558 hsa-miR-6781-3p 0 1 0
chr7:100577339|100577558 hsa-miR-6838-5p 0 1 0
chr7:100577339|100577558 hsa-miR-5699-3p 0 1 0
chr7:100577339|100577558 hsa-miR-4670-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr7:100577339|100577558
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MRDQDRARGADPGVREGGGWGVGGSGSGVSLGAWGTCCLVPSPCPLPQGLIRVVAA
Nucleotide Sequence CTGAGGGACCAAGACAGGGCAAGAGGGGCAGACCCCGGGGTCAGGGAAGGAGGCGGTTGGGGGGTGGGAGGATCGGGCAGTGGCGTCAGTTTGGGGGCTTGGGGTACCTGCTGCTTGGTGCCCTCTCCCTGTCCCCTGCCCCAGGGCTTAATTCGGGTGGTCGCTGCT
CircID chr7:100577339|100577558
ORF Type ORF2
Protein Length 72
Nucleotide Length 216
Protein Sequence LQGVRAPPLLPCRLLPPEGPRQGKRGRPRGQGRRRLGGGRIGQWRQFGGLGYLLLGALSLSPAPGLNSGGRC
Nucleotide Sequence CTGCAAGGTGTCCGGGCGCCGCCGCTCCTCCCCTGCCGGCTCCTCCCGCCTGAGGGACCAAGACAGGGCAAGAGGGGCAGACCCCGGGGTCAGGGAAGGAGGCGGTTGGGGGGTGGGAGGATCGGGCAGTGGCGTCAGTTTGGGGGCTTGGGGTACCTGCTGCTTGGTGCCCTCTCCCTGTCCCCTGCCCCAGGGCTTAATTCGGGTGGTCGCTGC
CircID chr7:100577339|100577558
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MPLLPCLGPSGGRSRQGRSGGARTPCS
Nucleotide Sequence CTGCCCCTCTTGCCCTGTCTTGGTCCCTCAGGCGGGAGGAGCCGGCAGGGGAGGAGCGGCGGCGCCCGGACACCTTGCAGC
CircID chr7:100577339|100577558
ORF Type ORF4
Protein Length 65
Nucleotide Length 195
Protein Sequence MGQGTGRGHQAAGTPSPQTDATARSSHPPTASFPDPGVCPSCPVLVPQAGGAGRGGAAAPGHLAA
Nucleotide Sequence CTGGGGCAGGGGACAGGGAGAGGGCACCAAGCAGCAGGTACCCCAAGCCCCCAAACTGACGCCACTGCCCGATCCTCCCACCCCCCAACCGCCTCCTTCCCTGACCCCGGGGTCTGCCCCTCTTGCCCTGTCTTGGTCCCTCAGGCGGGAGGAGCCGGCAGGGGAGGAGCGGCGGCGCCCGGACACCTTGCAGCT
CircID chr7:100577339|100577558
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MTPLPDPPTPQPPPSLTPGSAPLALSWSLRREEPAGEERRRPDTLQ
Nucleotide Sequence CTGACGCCACTGCCCGATCCTCCCACCCCCCAACCGCCTCCTTCCCTGACCCCGGGGTCTGCCCCTCTTGCCCTGTCTTGGTCCCTCAGGCGGGAGGAGCCGGCAGGGGAGGAGCGGCGGCGCCCGGACACCTTGCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab